FC931485

Overview
NameFC931485
Unique NameFC931485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:105..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 7.800e-60
Identity = 75/119 (63.03%), Postives = 99/119 (83.19%), Query Frame = 1
Query:  112 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            P+ KGLSW FY ++CPK+E+I+RK+++   K+DIGLAA ++RIHFHDCFVQGC+ SVLL GS S   EQ++ PNL+LR++A   +++LRA V K+CG+VVSC+DILALAARDSV LSGG
Sbjct:   39 PIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGG 157          

HSP 2 Score: 89.7373 bits (221), Expect = 7.800e-60
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFA----TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPNKTP 674
            +Y +PLGRRDS  FA    T+ NLP PF N + ++ DF  +  N  + VALSGGHT+G+AHCP+FT+RLYPN+ P
Sbjct:  159 DYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDP 233          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.049e-46
Identity = 79/124 (63.71%), Postives = 102/124 (82.26%), Query Frame = 1
Query:  100 AQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALSGG 459
            A++PP+A GLS+ FY +SCPK ESIVR  +Q+A+++D+GLAAGL+R+HFHDCFVQGCD SVLL+GS +   EQ A PNL+LR  A K ++D+  R+HKEC G VVSC+D+LALAARDSV +SGG
Sbjct:   32 ARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGG 155          

HSP 2 Score: 44.669 bits (104), Expect = 1.049e-46
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 620
            +Y +PLGRRDS +FAT    +  LP P +    +L    +   +A + VALSGGHT+
Sbjct:  157 SYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.640e-37
Identity = 59/117 (50.43%), Postives = 83/117 (70.94%), Query Frame = 1
Query:  118 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            A+GLS T+Y  SCP  E IV+  + NAL+ D  LAAGLIR+ FHDCF++GCD S+LL+    +T+E+++  NLSLR    + +DD + ++   C  VVSCADI+A+AARD+V  +GG
Sbjct:   23 ARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLR--GYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGG 137          

HSP 2 Score: 59.3066 bits (142), Expect = 1.640e-37
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 3
Query:  465 YDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL 656
            YD+P GR D K        NLPSPF N + ++  F ++ F  ++ VALSG HT+G+A C +F  RL
Sbjct:  140 YDIPKGRFDGKRSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL 205          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.359e-36
Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTY 474
            FY Q+C  +E+IV K +  A  KD  +A  +IR++FHDCF  GCD S+LL+GS SE+ A PNLS+R    + +DD+++ V KEC RVVSCADI+ALA RD V L+ G  T Y
Sbjct:   32 FYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSNSEKKASPNLSVR--GYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRY 141          

HSP 2 Score: 52.373 bits (124), Expect = 1.359e-36
Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 3
Query:  456 RANYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            +  Y++P GR D K + A +V+LPSP          F ++  +  + V L GGHT+G+ HC    +RLY
Sbjct:  138 KTRYEIPTGRLDGKISSALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLY 206          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.002e-36
Identity = 54/110 (49.09%), Postives = 76/110 (69.09%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            FY  SCP+ + IV   ++ A+ K+  +AA L+R+HFHDCFVQGCD S+LL+ S    SE+NA PN +      + +D+++A++ + C + VSCADILALAAR S  LSGG
Sbjct:   49 FYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKN-SVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGG 157          

HSP 2 Score: 63.929 bits (154), Expect = 3.002e-36
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 3
Query:  462 NYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            +++LPLGRRDS+T +      N+P+P S    +L  F+ K  N  + V+LSGGHT+G+A C  F  RLY
Sbjct:  159 SWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLY 227          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.914e-36
Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 1
Query:  112 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            P+   L   FY  SCP  E IV+  + N +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL++R     F+D +++ +  +C  +VSCADI+ALA+RD+V  +GG
Sbjct:   21 PIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVR--GFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGG 136          

HSP 2 Score: 62.003 bits (149), Expect = 3.914e-36
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3
Query:  462 NYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            N+ +P GRRD   S     + N+P P SN T +   F  +  + ++ V LSG HT+G++HC +FTNRLY
Sbjct:  138 NWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLY 206          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 6.640e-36
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS   Y +SCP L  IVRKQ+  ALK +I +AA LIR+HFHDCFV GCD S+LL+G+ SE+ A PN++  +   + +D ++A V   C  VVSCADIL LAARDSV LSGG
Sbjct:   30 LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSEKLAIPNINSAR-GFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGG 139          

HSP 2 Score: 49.2914 bits (116), Expect = 6.640e-36
Identity = 29/71 (40.85%), Postives = 36/71 (50.70%), Query Frame = 3
Query:  453 WRANYDLPLGRRDSKTFA--TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            WR    + LGR+D       +  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+
Sbjct:  142 WR----VALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLF 208          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.468e-35
Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            LS   Y +SCP L  IVR Q++ ALK +I +AA LIR+HFHDCFV GCD SVLL+G+ SE+ A PN++      + +D ++A V   C  VVSCADIL LAARDSV LSGG
Sbjct:   30 LSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNSEKLAIPNVN-SVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGG 139          

HSP 2 Score: 50.447 bits (119), Expect = 1.468e-35
Identity = 29/71 (40.85%), Postives = 37/71 (52.11%), Query Frame = 3
Query:  453 WRANYDLPLGRRDSKTF--ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            WR    + LGR+D      ++  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+
Sbjct:  142 WR----VALGRKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLF 208          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.490e-35
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 1
Query:  139 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGQITTYHWE 483
            FY   C  +ESIVR  +Q+ ++     A G++R+HFHDCFV GCDGSVLL G+TSE+ A PN SLR    + +++ +AR+ K C R VSCADIL LAARD+V L+GGQ     WE
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTSERTAVPNRSLR--GFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQ----RWE 149          

HSP 2 Score: 49.2914 bits (116), Expect = 2.490e-35
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 3
Query:  465 YDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 635
            +++PLGR D + + A+ VNLP P  +      DF  KT N  + V L GGHT+G A C
Sbjct:  148 WEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGC 205          
BLAST of FC931485 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.225e-35
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 1
Query:  127 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG 459
            L   FY +SCP  E I+   IQN +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL+LR     FV+ ++A + K C + VSCADI+AL ARD+V  +GG
Sbjct:   29 LQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLR--GFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGG 139          

HSP 2 Score: 56.9954 bits (136), Expect = 4.225e-35
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 3
Query:  462 NYDLPLGRRD----SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 659
            ++ +P GRRD    +KT AT  N+P P SN T +   F+ +  N ++ V LSG HT+G++HC +   RLY
Sbjct:  141 SWSVPTGRRDGRISNKTEATN-NIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLY 209          
The following BLAST results are available for this feature:
BLAST of FC931485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER12_ARATH7.800e-6063.03Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER1_SORBI1.049e-4663.71Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER47_ARATH1.640e-3750.43Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER60_ARATH1.359e-3652.68Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER9_ARATH3.002e-3649.09Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER3_ARATH3.914e-3645.76Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER59_ARATH6.640e-3656.76Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERN_ARMRU1.468e-3556.76Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER69_ARATH2.490e-3553.04Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER30_ARATH4.225e-3550.44Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34105F04EF PostHarvP1 Citrus clementina cDNA clone C34105F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931485 ID=FC931485; Name=FC931485; organism=Citrus clementina; type=EST; length=754bp
GAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTT
CATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGG
CACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAG
AGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCT
GAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACG
ATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCAAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACA
TTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGAT
CCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCC
TCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAAT
CGCCTCTATCCCAACAAGACCCCACACTGGACAAACATTCGCCAACATCT
CAAAAGACATGCCCACTTCGGATTCCAACACACACGTCTTCGACATCGGT
CCCG
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