FC931492

Overview
NameFC931492
Unique NameFC931492
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.236e-48
Identity = 99/224 (44.20%), Postives = 141/224 (62.95%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+     +TR  FEE+N  +F KC   + +CL DAK++   +++V+LVGG + IPKV  L+Q      EL + INP EA   GAA++ A+ SG  D     DLL + VTPL +G+   G     +IPRNTT+P +K+ +F+T  DNQ   LI V+EGE  + ++N+LLG F++TGIPP+P+GVP++NVC DIDA+ +L V
Sbjct:  271 ACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVHQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQ-DLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNV 493          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.814e-48
Identity = 100/224 (44.64%), Postives = 141/224 (62.95%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+     +TR  FEE+N  +F KC   + +CL DAK++   ++DV+LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +IPRNTT+P +K+ VF+T  DNQ   LI VYEGE  + ++N+LLG F+++GIPP+P+GVP+I VC DIDA+ +L V
Sbjct:  272 ACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQ-DLLLLDVTPLSLGLETAGGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 3.814e-48
Identity = 99/216 (45.83%), Postives = 139/216 (64.35%), Query Frame = 3
Query:   30 LSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            LSS     I +D L  G+     +TR  FEE+N  +F KC   + +CL DAK++   ++DV+LVGG + IPKV+ L+Q      EL + INP EA   GAA++GA+ SG  +     DLL + VTPL +G+   G     +IPRNTT+P +K+ VF+T  DNQ   LI VYEGE  + ++N+LLG F+++GIPP+P+GVP+I VC DIDA+ +L V
Sbjct:  280 LSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQ-DLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47
Identity = 101/224 (45.09%), Postives = 140/224 (62.50%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+     +TR  FEE+N  +F KC   + +CL DAK++   ++DV+LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +IPRNTT+P +K+ VF+T  DNQ   LI VYEGE  +  +N+LLG F+++GIPP P+GVP+INVC DIDA+ +L V
Sbjct:  272 ACERAKRTLSSTAQTTIEIDSLYEGVDFYSPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQ-DLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQINVCFDIDANGILNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.228e-47
Identity = 100/224 (44.64%), Postives = 139/224 (62.05%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+     +TR  FEE+N  +F KC   + +CL DAK++   ++DV+LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +IPRNTT+P +K+ VF+T  DNQ   LI VYEGE  +  +N+LLG F+++GIPP+P+GVP+I VC DIDA+  L V
Sbjct:  272 ACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQ-DLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGTLNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.393e-47
Identity = 100/224 (44.64%), Postives = 142/224 (63.39%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G+  + ++TR  FEE+   +F KC   + +CLHDAK++   ++DV+LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ +G        DLL + VTPL +G+   G     +IPRNTT+P +K+ VF+T  DNQ   LI VYEGE  + ++N+LLG F++TGIPP+P+GVP+INV  DIDA+ +L V
Sbjct:  272 ACERAKRTLSSAAQTTIELDSLFEGVDFATSITRARFEELCMDLFRKCMDPVEKCLHDAKMDKMTVHDVVLVGGSTRIPKVQQLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGEGGEKVQ-DLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVIFDIDANGILNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.356e-45
Identity = 98/224 (43.75%), Postives = 140/224 (62.50%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L +G+     +TR  FEE+N  +F KC   + +CL DAK++   ++DV+LVGG + IPKV+ L+       EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +I RNTT+P +K+ VF+T  DNQ   LI VYEGE  + ++N+LLG F+++GIPP+P+GVP+I VC DIDA+ +L V
Sbjct:  272 ACERAKRTLSSTAQTTIEIDSLFDGIDFYAPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKNSIDDVVLVGGSTRIPKVQQLLVDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQ-DLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.022e-45
Identity = 96/224 (42.86%), Postives = 139/224 (62.05%), Query Frame = 3
Query:    6 ATQDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS     I +D L  G      +TR  FEE+N  +F KC   + +CL DAK++   +++++LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +I RNTT+P +K+ VF+T  DNQ   LI V+EGE  + ++N+LLG F+++GIPP+P+GVP+I VC DIDA+ +L V
Sbjct:  272 ACERAKRTLSSTAQTTIEIDSLYGGADFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQ-DLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNV 494          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.500e-44
Identity = 99/229 (43.23%), Postives = 142/229 (62.01%), Query Frame = 3
Query:    6 ATQDAIHKLSSETS-VQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEEN----HLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            A + A   LSS T+   I +D L  G+     +TR  FEE+N  +F+KC   + +CL D+K++   +++V+LVGG + IPKV+ L+Q      EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +IPRNTT+P +K+ +F+T  DNQ   LI VYEGE  +  +N     LLG F++TGIPP+P+GVP+INV  DIDA+ +L V
Sbjct:  270 ACERAKRTLSSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFKKCMDPVEKCLRDSKIDKAQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNE--RSDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTRDNKLLGKLLGKFELTGIPPAPRGVPQINVVFDIDANGILNV 496          
BLAST of FC931492 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.558e-44
Identity = 95/222 (42.79%), Postives = 141/222 (63.51%), Query Frame = 3
Query:   12 QDAIHKLSSETSVQINVD-LGNGLKVSKNVTREEFEEVNQKVFEKCGSLITQCLHDAKVEIEDLNDVILVGGCSYIPKVRNLIQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 674
            + A   LSS+ S +I ++   NG   S+ +TR +FEE+N  +F+K    + Q L DAKV+  +++D++LVGG + IPKV+ L++      +  +GINP EA   GAA++G V SG     G  D++ + V PL +GI   G     +IPRNT +P RK  +F+T  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ +L+V
Sbjct:  312 EKAKRTLSSQMSTRIEIEAFHNGEDFSETLTRAKFEELNMDLFKKTLKPVEQVLKDAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGEE---GTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEVSFDLDANGILKV 530          
The following BLAST results are available for this feature:
BLAST of FC931492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_SOYBN2.236e-4844.20Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP7C_PETHY3.814e-4844.64Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_ARATH3.814e-4845.83Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7E_SPIOL1.893e-4745.09Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC3.228e-4744.64Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP70_CHLRE9.393e-4744.64Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP73_ARATH1.356e-4543.75Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH3.022e-4542.86Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP70_DAUCA1.500e-4443.23Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
GRP78_ASPNG2.558e-4442.7978 kDa glucose-regulated protein homolog OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionC34105F11EF PostHarvP1 Citrus clementina cDNA clone C34105F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931492 ID=FC931492; Name=FC931492; organism=Citrus clementina; type=EST; length=697bp
GGGTTGCTACCCAGGATGCAATCCATAAACTATCATCAGAGACGAGTGTT
CAGATTAATGTCGACTTGGGAAATGGATTAAAAGTATCAAAAAATGTAAC
GCGAGAGGAGTTTGAGGAAGTAAACCAAAAGGTATTTGAGAAATGTGGGA
GCCTTATAACCCAGTGCTTGCATGATGCGAAGGTGGAGATAGAGGATCTG
AATGATGTAATACTCGTGGGTGGCTGCTCATATATTCCAAAAGTAAGGAA
TCTTATCCAGAGTACATGCAAAAAAGTAGAACTCTATGAGGGTATTAACC
CATTGGAAGCAGCAGTTAGTGGGGCAGCTCTGGAAGGAGCAGTGACTTCA
GGCATTAACGATCCATTTGGGAACCTGGACCTGTTAACCATCCAAGTCAC
ACCACTTGGCATTGGTATACGAGCTAATGGCAACAACTTTGTACCCATCA
TTCCTAGAAACACCACGATGCCAGCACGGAAAGATCTGGTCTTCACAACA
GTTCGCGACAACCAGTCTGAGGCGCTGATTATTGTTTATGAAGGTGAAGG
GGAGAAGGTAGAAGAGAATCATCTTCTAGGCTATTTCAAGATAACAGGAA
TTCCTCCCTCTCCCAAAGGAGTACCAGAAATAAATGTGTGCATGGACATT
GATGCCTCGAGTGTGCTGAGAGTTTTGGTTGGGGTCATTATGCCTGG
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