FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:13..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_ARATH (NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=At5g20080 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 2.013e-92
Identity = 165/213 (77.46%), Postives = 185/213 (86.85%), Query Frame = 1
Query:   40 MATTFFRRLAKATPIAFNEAFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            MAT+FFRRLA++ PI F  AFG Q KS    FRF  GAIAA++GG SYY   S  NLV+LDQ  EETGPK ALNPDKW+ FKLQDTARVSHN+ LFRFSFDPSA+LGL VASC+LTRAPLG +AEG TKYV+RPYTPISD EAKG+FDLLIKVYP+GKMSQHFASLKPGDV+EVKGP+EK +YSPNMKKHIGMIAGG+GITPMLQVI+AI+KN
Sbjct:    1 MATSFFRRLARSAPITFPVAFGSQSKSGSGAFRFSTGAIAALSGGFSYYYLTSGNNLVYLDQAKEETGPKTALNPDKWLEFKLQDTARVSHNTQLFRFSFDPSAELGLHVASCLLTRAPLGYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIVKN 213          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32
Identity = 72/148 (48.65%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S+H  +LK GDV++V+GP   + Y+PNM +HIGMIAGGTGITPMLQVI+AI++N+  + G
Sbjct:   57 LNPTEFQEFVLKEKTDISHNVSIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVIKAIIRNRPRNGG 200          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.058e-32
Identity = 83/186 (44.62%), Postives = 114/186 (61.29%), Query Frame = 1
Query:  160 AVAGGVSYYCYFSSPNLVHLDQINEETGPKI--ALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            A+A GV Y    +S +         E G ++  AL+P ++  F+L++   V+HN+ +FRF+  +    LGL +   I  RA +G       K V RPYTPIS  E +G+FDLLIKVY +G MS +  ++  GD +EVKGP  K  Y PNM+K IGM+AGGTGITPMLQVI+AILKN    + ++ V
Sbjct:   15 ALAAGVKYVFTLTSGSNKDKKGGEAEKGKQVEKALDPQEYRKFQLKEKFIVNHNTRIFRFALPNEDDILGLPIGQHISLRAVVGG------KEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAILKNPSDKTEISLV 194          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            P+  LNP+++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTGITPMLQ+I+AI++N+  + G
Sbjct:   57 PRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGG 204          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32
Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTGITPMLQ+I+AI++N+  + G
Sbjct:   40 PRKVLNPSEFQNFVLKEKTDISHNVAIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTLKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGG 187          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.982e-31
Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            P+  LNP ++  F L+D   VSHN  ++RF+   P+  LGL +   I   A +     G +K +VR YTPIS  +  G+FDLL+K YP+G +S+H  +L+ GD ++V+GP   + Y+PNM +HIGMIAGGTGITPMLQVI+AI+K +  + G
Sbjct:   52 PRKVLNPTEFQNFVLKDKTIVSHNVCIYRFALPRPTDILGLPIGQHISLAATI----PGQSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVIKAIIKGRPRNGG 199          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.982e-31
Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTGITPMLQ+I+AI++N+  + G
Sbjct:   36 PRKVLNPTEFQNFVLKEKNEISHNVAIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDNMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGG 183          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31
Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTGITPMLQ+I+A+++N+  + G
Sbjct:   53 PRKVLNPTEFQEFVLKEKTDISHNVCIYRFALPRPADILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGG 200          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31
Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  244 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSG 696
            P+  LNP ++  F L++   VSHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTGITPMLQ+I+A+++N+  + G
Sbjct:   53 PRKVLNPTEFQEFVLKEKIDVSHNVCIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGG 200          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.416e-31
Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 1
Query:  238 TGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            +G K  L P+++  F+L++   +SHN+ ++RF        LGL +   I     LG   EG  K VVR YTPIS  E KGHFDLLIK YP G +S++ A+LK G+ + VKGP   + Y+PNM +H GMI+GGTGITPMLQV++AI++ +
Sbjct:   27 SGSKKVLKPNEFQEFELEEKTVLSHNTAIYRFKLPRKTDILGLPIGQHI----SLGATIEGQPKEVVRSYTPISSDEDKGHFDLLIKSYPTGNISKYVANLKVGEKMRVKGPKGAMVYTPNMVRHFGMISGGTGITPMLQVVKAIIRGR 171          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
NCB5R_ARATH2.013e-9277.46NADH-cytochrome b5 reductase-like protein OS=Arabi... [more]
NCB5R_ASPCL2.341e-3248.65NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_DICDI3.058e-3244.62NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_EMENI6.812e-3246.05NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]
NCB5R_ASPTN6.812e-3246.05NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_COCIM1.982e-3146.71NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_ASPOR1.982e-3146.05NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_NEOFI2.589e-3145.39NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]
NCB5R_ASPFU2.589e-3146.05NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
NCB5R_PHANO4.416e-3147.65NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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