FC931502

Overview
NameFC931502
Unique NameFC931502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig380 contig Ccv1_Contig380:479..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL3_BOVIN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.130e-45
Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 3
Query:   81 KRWLPLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + +A++ P+ERA +LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG +S
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESASMSPEERARYLENYDAIRVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS 197          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL3_HUMAN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens GN=UCHL3 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.202e-44
Identity = 95/196 (48.47%), Postives = 131/196 (66.84%), Query Frame = 3
Query:   81 KRWLPLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + + ++ P+ERA +LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG +S
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS 197          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL3_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus GN=Uchl3 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.569e-44
Identity = 95/196 (48.47%), Postives = 131/196 (66.84%), Query Frame = 3
Query:   81 KRWLPLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + + ++ P+ERA FLEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG +S
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAKFLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS 197          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL3_PIG (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.496e-44
Identity = 95/196 (48.47%), Postives = 132/196 (67.35%), Query Frame = 3
Query:   81 KRWLPLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N  +++ F++ S   KF + +A++ P ERA +LE+   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG +S
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTPSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKFLEESASMSPDERARYLESYDAIPVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS 197          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL3_RAT (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus GN=Uchl3 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.266e-43
Identity = 94/196 (47.96%), Postives = 129/196 (65.82%), Query Frame = 3
Query:   81 KRWLPLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + +  + P+ERA  LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG +S
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS 197          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL4_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus GN=Uchl4 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.121e-41
Identity = 91/199 (45.73%), Postives = 130/199 (65.33%), Query Frame = 3
Query:   81 KRWLPLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIG---LLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL+++P+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIG   L+HA+ N   ++ F++ S   KF + + ++ P+ERA +LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDG K  PI+HG +S
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKFLEESVSMSPEERAKYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINHGKTS 200          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL1_HORSE (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Equus caballus GN=UCHL1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40
Identity = 87/186 (46.77%), Postives = 116/186 (62.37%), Query Frame = 3
Query:   93 PLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            P+E NP+++N+ L  LG+ A +    DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HGASS
Sbjct:    5 PMEINPEMLNKVLARLGV-AGQWRFVDVLGLEEETLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASS 189          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL1_RAT (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Rattus norvegicus GN=Uchl1 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.796e-40
Identity = 87/186 (46.77%), Postives = 116/186 (62.37%), Query Frame = 3
Query:   93 PLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            P+E NP+++N+ L  LG+ A +    DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HGASS
Sbjct:    5 PMEINPEMLNKVLAKLGV-AGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASS 189          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL1_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Mus musculus GN=Uchl1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.796e-40
Identity = 87/186 (46.77%), Postives = 116/186 (62.37%), Query Frame = 3
Query:   93 PLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            P+E NP+++N+ L  LG+ A +    DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HGASS
Sbjct:    5 PMEINPEMLNKVLAKLGV-AGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASS 189          
BLAST of FC931502 vs. ExPASy Swiss-Prot
Match: UCHL1_PIG (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Sus scrofa GN=UCHL1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40
Identity = 87/186 (46.77%), Postives = 115/186 (61.83%), Query Frame = 3
Query:   93 PLEANPDVMNQFLWGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHGASS 644
            P+E NP+++N+ L  LG+ A      DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HGASS
Sbjct:    5 PMEINPEMLNKVLTRLGV-AGHWRFADVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASS 189          
The following BLAST results are available for this feature:
BLAST of FC931502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
UCHL3_BOVIN4.130e-4548.98Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_HUMAN1.202e-4448.47Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_MOUSE1.569e-4448.47Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_PIG3.496e-4448.47Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_RAT2.266e-4347.96Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL4_MOUSE2.121e-4145.73Ubiquitin carboxyl-terminal hydrolase isozyme L4 O... [more]
UCHL1_HORSE1.053e-4046.77Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]
UCHL1_RAT1.796e-4046.77Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]
UCHL1_MOUSE1.796e-4046.77Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]
UCHL1_PIG2.345e-4046.77Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]

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Properties
Property NameValue
Genbank descriptionC34105G09EF PostHarvP1 Citrus clementina cDNA clone C34105G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931502 ID=FC931502; Name=FC931502; organism=Citrus clementina; type=EST; length=718bp
GATTTTTTTTTATTCGGTGTTTCTTCTGATCTAGCTAAAGAGAAAGCAAA
ATGGCAGCAGTAGACGAGCGTCCTTCAGCTAAGAGGTGGCTTCCTCTTGA
AGCTAATCCCGATGTCATGAACCAGTTCCTTTGGGGCCTTGGTCTTCCAG
CTGAGGAGGCAGAGTGCTATGATGTGTATGGCTTGGATGATGAGCTCTTG
GCAATGGTTCCACAACCTGTTCTTGCCGTGCTGTTTCTTTATCCCTTAAC
TGCACAGAGTGAAGAAGAAAGAAGGTTGCAGGACAATGACAAAAAGGAAT
TTAGCAAGAATGTTTATTTCATGAAGCAAACTGTTGGAAATGCTTGTGGA
ACAATTGGACTTCTTCATGCTGTTGGGAACGTCACTTCGGAAATCAAGTT
TCAAGCTGATTCATTCTTCGATAAATTTTACAAGTCCACGGCGAACTTGG
ATCCACAAGAGCGTGCAGCATTTCTTGAGAATGATAAGGAAATGGAAGTT
GCTCATTCGGTAGCAGCTTCAGCTGGTGACACAGAGGCTACCGATGACGT
GAATGATCATTTTATCTGCTTCACCTGTGTGGATGGGGAACTTTATGAAC
TTGATGGAAGGAAGTCGGGGCCAATATCTCATGGTGCTTCGTCTCCAGCA
GCTTATTGTTGGATGCAGTTAAAGTGATAAGGGCATGATCCAGAAAATCC
NTGATCACTGAACTTCAT
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