FC931508

Overview
NameFC931508
Unique NameFC931508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931508_ssr444 microsatellite FC931508_ssr444:444..455. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR38_ARATH (Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.859e-47
Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYV--TPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            I+WYDNCL+KY++T FFG+ID +N+FY++NV+ V++P +FN +TK LLT+L +KA      KL+A GE  +GK NKLYGL QCTRDL S+ CK CL+GII ELP+CCDGKEGGRVV GSCNFRYEIYPFV
Sbjct:  121 IVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGK-NKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYPFV 249          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR61_ARATH (Putative cysteine-rich repeat secretory protein 61 OS=Arabidopsis thaliana GN=CRRSP61 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 4.421e-40
Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPK---LYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFVN 389
            I+W+D CLLK + T FF +ID+KNKFYM++ + V++P  FN +TK LLT+L  KA        LY  GEM+LGK  KLYG+ QC RDL    CK CLD II ELP CCDGKEGGRV+SGSCNFRYEIYPF++
Sbjct:  125 IVWFDKCLLKISPTAFFEKIDDKNKFYMYSTKKVSDPALFNVKTKALLTELTAKATRRSDKLLLYETGEMKLGKM-KLYGMVQCRRDLWFTVCKTCLDKIIGELPKCCDGKEGGRVLSGSCNFRYEIYPFLD 255          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR21_ARATH (Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.989e-32
Identity = 65/132 (49.24%), Postives = 95/132 (71.97%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVS-FNQRTKELLTQLAEKAYVTPK---LYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYDNC+L+ ++ + F +ID +N F+M+N + V+  +  FN+ T++LL +L EKA +  K   +YA GE  LG+  KLY + QCT+DL+  +C  CL+ I+ +LP CC GK+GGRV+S SCNFRYE+YPF+
Sbjct:  124 IIWYDNCVLEISSIDTFNKIDYQNNFFMYNAKDVSGDIELFNKNTRDLLHELKEKANIKSKKDFMYAAGEKGLGEK-KLYAMVQCTKDLTPNNCNVCLNWIMAKLPKCCKGKQGGRVLSTSCNFRYELYPFL 254          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR24_ARATH (Putative cysteine-rich repeat secretory protein 24 OS=Arabidopsis thaliana GN=CRRSP24 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.425e-30
Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVT-EPVSFNQRTKELLTQLAEKA-------YVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYDNC L  ++   +GQID KN FYM+N + V  +  SF +  K  L +L  KA       YV   +YA G   LG + KLY + QCT+DLS  +C  CLD I+ +LP CC+GK+GGRV+S SCNFRYE+YPFV
Sbjct:  126 IIWYDNCHLDLSSIYTYGQIDYKNNFYMYNAKDVRGDKKSFYKNMKAFLHKLKAKASSKENKPYVKDYMYAAGRESLG-TVKLYAMVQCTQDLSLKNCTVCLDWIMTKLPECCNGKQGGRVLSPSCNFRYELYPFV 260          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR42_ARATH (Cysteine-rich repeat secretory protein 42/43/44/45/46/47/48/49/50/51/52/53/54 OS=Arabidopsis thaliana GN=CRRSP42 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 7.074e-30
Identity = 64/135 (47.41%), Postives = 85/135 (62.96%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKL-------YAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD CLLK ++   F +ID +N FY+ N   +++   FN+ T  LL +LA KA     L       YA GE  +G + K+Y + QCT+DL    C +CL+GI+R+ P CCDGK GGRV   SCNFRYE+YPF+
Sbjct:  121 IIWYDQCLLKISSVASFNKIDYENDFYLSNPNNMSDRGLFNKETSALLEKLAYKASDRNNLDGKQLVLYAAGEKRIG-TKKVYAMVQCTKDLIFTKCFECLEGILRKFPQCCDGKRGGRVFGTSCNFRYELYPFL 254          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR41_ARATH (Putative cysteine-rich repeat secretory protein 41 OS=Arabidopsis thaliana GN=CRRSP41 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.074e-30
Identity = 64/135 (47.41%), Postives = 85/135 (62.96%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKL-------YAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD CLLK ++   F +ID +N FY+ N   +++   FN+ T  LL +LA KA     L       YA GE  +G + K+Y + QCT+DL    C +CL+GI+R+ P CCDGK GGRV   SCNFRYE+YPF+
Sbjct:  121 IIWYDQCLLKISSVASFNKIDYENDFYLSNPNNMSDRGLFNKETSALLEKLAYKASDRNNLDGKQLVLYAAGEKRIG-TKKVYAMVQCTKDLIFTKCFECLEGILRKFPQCCDGKRGGRVFGTSCNFRYELYPFL 254          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR29_ARATH (Cysteine-rich repeat secretory protein 29 OS=Arabidopsis thaliana GN=CRRSP29 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.074e-30
Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVSFNQRTKELLTQLAEKAYVTPKL-------YAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYD CLLK ++   F +ID +N FY+ N + +++   FN+ T  LL +LA KA     L       YA GE  +G + K+  + QCT+DL    C +CL+GI+R+ P CCDGK+GGRV+  SCNFRYE+YPF+
Sbjct:  121 IIWYDQCLLKISSVASFNKIDYENDFYLSNPKNMSDRELFNKETSALLEKLANKASDRNNLDGKQLVLYAAGEKRIG-TKKVSAMVQCTKDLIFTKCFECLEGILRKFPECCDGKQGGRVLGTSCNFRYELYPFL 254          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR10_ARATH (Putative cysteine-rich repeat secretory protein 10 OS=Arabidopsis thaliana GN=CRRSP10 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.207e-29
Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVT-EPVSFNQRTKELLTQLAEKA-------YVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYDNC L  +    + +ID K+  Y+ N + V+     FN+ TK LL +L EKA       Y    +YA GE  LG + KLYG+ QCT+DLS  +C  CLD II +LP CC+GK+GGRV++ SC FRYE+YPFV
Sbjct:  119 IIWYDNCFLYISEIYTYEKIDFKHYLYLHNAKDVSGNKKLFNKNTKALLDKLKEKAIRKEQEPYTRDYMYAAGEESLG-TTKLYGMMQCTQDLSVKNCSVCLDSIIAKLPRCCNGKQGGRVLNPSCTFRYELYPFV 253          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR25_ARATH (Putative cysteine-rich repeat secretory protein 25 OS=Arabidopsis thaliana GN=CRRSP25 PE=5 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 2.688e-29
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVR-VVTEPVSFNQRTKELLTQLAEKA-------YVTPKLYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYDNCLL  ++     +ID ++ F M+N + V ++ ++FN+ T+ LL  L EKA       Y    LY+ GE  LGK  K+Y + QCT+DLS+ +C  CL  I+ +LP CC GK+GG V+S SCNFRYE+YPFV
Sbjct:  123 IIWYDNCLLDISSIYTLAEIDYRHIFNMYNAKDVSSDTMAFNKNTRALLYALKEKAISKKELPYRRDYLYSAGEESLGKK-KVYAMVQCTKDLSAKNCSVCLSYILSKLPKCCKGKQGGSVLSPSCNFRYELYPFV 257          
BLAST of FC931508 vs. ExPASy Swiss-Prot
Match: CRR22_ARATH (Putative cysteine-rich repeat secretory protein 22 OS=Arabidopsis thaliana GN=CRRSP22 PE=5 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.621e-28
Identity = 68/148 (45.95%), Postives = 88/148 (59.46%), Query Frame = 3
Query:    3 IIWYDNCLLKYTNTEFFGQIDNKNKFYMWNVRVVTEPVS-FNQRTKELLTQLAEKAYVTPK-------------------LYAVGEMELGKSNKLYGLTQCTRDLSSVDCKKCLDGIIRELPSCCDGKEGGRVVSGSCNFRYEIYPFV 386
            IIWYDNCLL+ +     G+ID +  FYM+N + V    + FN+ T+ LL +L EKA                        LYA GE  L ++ KLYG+ QCT+DLS  DC  CL+ II +LP+CC  K+GGRV+S SCNFRYE+Y FV
Sbjct:  131 IIWYDNCLLEISPINSLGKIDYEYNFYMYNEKDVNGDTNLFNKNTRALLYRLKEKATSKENNNGKQDLPEIGGKRLGMKMLYATGEKSL-RTMKLYGMVQCTKDLSIKDCIVCLNWIIAKLPTCCSNKQGGRVLSTSCNFRYELYRFV 277          
The following BLAST results are available for this feature:
BLAST of FC931508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CRR38_ARATH2.859e-4766.15Cysteine-rich repeat secretory protein 38 OS=Arabi... [more]
CRR61_ARATH4.421e-4060.61Putative cysteine-rich repeat secretory protein 61... [more]
CRR21_ARATH1.989e-3249.24Putative cysteine-rich repeat secretory protein 21... [more]
CRR24_ARATH1.425e-3050.74Putative cysteine-rich repeat secretory protein 24... [more]
CRR42_ARATH7.074e-3047.41Cysteine-rich repeat secretory protein 42/43/44/45... [more]
CRR41_ARATH7.074e-3047.41Putative cysteine-rich repeat secretory protein 41... [more]
CRR29_ARATH7.074e-3046.67Cysteine-rich repeat secretory protein 29 OS=Arabi... [more]
CRR10_ARATH1.207e-2949.26Putative cysteine-rich repeat secretory protein 10... [more]
CRR25_ARATH2.688e-2947.79Putative cysteine-rich repeat secretory protein 25... [more]
CRR22_ARATH6.621e-2845.95Putative cysteine-rich repeat secretory protein 22... [more]

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Properties
Property NameValue
Genbank descriptionC34105H03EF PostHarvP1 Citrus clementina cDNA clone C34105H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931508 ID=FC931508; Name=FC931508; organism=Citrus clementina; type=EST; length=506bp
CAATCATTTGGTACGACAATTGTCTTTTGAAGTACACAAACACGGAGTTC
TTTGGCCAAATTGACAACAAAAACAAGTTCTATATGTGGAACGTGAGAGT
GGTCACCGAGCCGGTGTCTTTCAATCAAAGGACCAAGGAATTGTTAACCC
AACTAGCTGAAAAAGCTTATGTTACTCCCAAATTATATGCGGTAGGAGAA
ATGGAGCTCGGAAAATCGAATAAACTCTATGGATTGACTCAATGCACAAG
GGATCTTTCTAGCGTTGATTGCAAGAAGTGTCTTGATGGCATAATTCGTG
AGCTCCCAAGCTGTTGTGATGGGAAAGAAGGAGGAAGAGTTGTTAGTGGA
AGTTGTAACTTTAGATATGAGATTTATCCCTTTGTTAATGCTTGAAGTTT
AAAACAATCTCTGGCTTTTACTTAGGGATCTTTCCCATAATATTAAATAA
ATAAAATAAGAGGAACAATATGTAAGTCTTATATTCCATTGGTTAATATG
AGTTTA
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