FC931518

Overview
NameFC931518
Unique NameFC931518
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12248 contig Ccv1_Contig12248:55..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 1.715e-86
Identity = 163/200 (81.50%), Postives = 171/200 (85.50%), Query Frame = 2
Query:   83 MACASFAKLNAASSQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            MA ASF K N  SS WIGQ+SF   + SSS       RVS  IRAGAY++ELVKTAK+IASPGRGILAIDESNATCGKRLASIGLDNTE NRQAYRQLLLTTPGLGDYISG+ILFEETLYQST DGK FVDCLR+  IVPGIKVDKGL PL  SN ESWCQGLDGLASRS EYYKQGARFAKWRTVVS+PCGPSALAVKE
Sbjct:    1 MASASFVKPNTLSSPWIGQRSFAHTSASSSPPP----RVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKE 196          

HSP 2 Score: 23.483 bits (49), Expect = 1.715e-86
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  197 AAWGLARYA 205          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 1.437e-73
Identity = 142/186 (76.34%), Postives = 153/186 (82.26%), Query Frame = 2
Query:  137 QQSFTQRTGSSSSTRFATR----RVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            + SF  +     +TR A       VS+ +RAGAY +ELVKTAKTIASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISGAILFEETLYQST DGKK VD L E+KIVPGIKVDKGLVPL  SNNESWCQGLDGLASR   YY+QGARFAKWRTVVSIP GPS LAVKE
Sbjct:    8 KSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKE 193          

HSP 2 Score: 23.483 bits (49), Expect = 1.437e-73
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  194 AAWGLARYA 202          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 1.712e-71
Identity = 140/201 (69.65%), Postives = 158/201 (78.61%), Query Frame = 2
Query:   83 MACASFAKLNAASSQWIGQQSFTQRTGSSSSTRFA-TRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            MA AS  K +         +  T R  S +  RF  +   S+ +RA +Y +ELVKTAKT+ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL++ PGLG Y+SGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKG +PLP SN+ESWCQGLDGLA RS  YY+QGARFAKWRTVVSIP GPSALAVKE
Sbjct:    1 MASASLLKTSPVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 201          

HSP 2 Score: 23.483 bits (49), Expect = 1.712e-71
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  202 AAWGLARYA 210          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 2.233e-71
Identity = 141/203 (69.46%), Postives = 160/203 (78.82%), Query Frame = 2
Query:   83 MACASFAKLNAA--SSQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGA-YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            MA  S  K +     S+W+  QS   R  SS+S     R  S+ +RA + Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SIGL+NTE NRQA+R LL++ PGLG Y+SGAILFEETLYQSTT+GKK VD L E+ IVPGIKVDKGLVPL  SNNESW QGLDGL+SR+  YY+QGARFAKWRTVVSIP GPSALAVKE
Sbjct:    1 MASTSLLKASPVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKE 203          

HSP 2 Score: 23.483 bits (49), Expect = 2.233e-71
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  204 AAWGLARYA 212          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 2.912e-71
Identity = 141/199 (70.85%), Postives = 158/199 (79.40%), Query Frame = 2
Query:   92 ASFAKLNAASSQWIGQQSFTQRTGSS-SSTRFATRRVSVPIRAG-AYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            A+  K +   S W+  QS   R  SS S+ R      ++ +RA  AY +ELVKTAKTIASPG GI+A+DESNATCGKRLASIGL+NTE NRQAYR LL++ PGLG YISGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKGLVPL  S +ESWCQGLDGLASR+  YY+QGARFAKWRTVVSIP GPSALAVKE
Sbjct:    6 ATMLKASPVKSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKE 204          

HSP 2 Score: 23.483 bits (49), Expect = 2.912e-71
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  205 AAWGLARYA 213          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 6.464e-71
Identity = 132/158 (83.54%), Postives = 144/158 (91.14%), Query Frame = 2
Query:  209 IRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            IRAG+Y +ELVKTAKTIASPGRGILA+DESNATCGKRLASIGL+NTE NRQA+R LL+T P LG+YISGAILFEETLYQSTTDG+K VD L E+ I+PGIKVDKGLVPL  SN+ESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKE
Sbjct:    4 IRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 161          

HSP 2 Score: 23.483 bits (49), Expect = 6.464e-71
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  162 AAWGLARYA 170          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 1.004e-68
Identity = 128/155 (82.58%), Postives = 139/155 (89.68%), Query Frame = 2
Query:  218 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKE 682
            G+Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SIGL+NTE NRQA+R LL+T P LG+YISGAILFEETLYQST DG+K VD L E+ I+PGIKVDKGLVPL  SNNESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKE
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 155          

HSP 2 Score: 23.483 bits (49), Expect = 1.004e-68
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  682 AAWGLARYA 708
            AAWGLARYA
Sbjct:  156 AAWGLARYA 164          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57
Identity = 112/158 (70.89%), Postives = 129/158 (81.65%), Query Frame = 2
Query:  218 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKELHG 691
            G Y EEL+KTA T+AS GRGILA+DESNATCGKRL SIG++NTE NR+AYR+LL+T PGLG YISGAILFEETLYQST  GKKFVD ++E+ IVPGIKVDKGLVP P +   SWC GLDG  S + EYYK GARFAKWR+VVSIP GPS +  +  +G
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVPCP-TPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPSIMLPRLAYG 183          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.289e-46
Identity = 93/154 (60.39%), Postives = 113/154 (73.38%), Query Frame = 2
Query:  224 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKE 682
            Y +EL+KTAK IA+PGRGILA DES  T GKR A I ++NTE+NRQAYR+LL T+PG    +SG ILFEETLYQ T+DGK FVD L E  ++PGIKVDKGLV L  +N E+  QGLD L +R  +YY+ GARFAKWR    I    PS L+++E
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQE 161          
BLAST of FC931518 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.563e-44
Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 2
Query:  218 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPESNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKE 682
            G Y +EL+K AK IA+PG+GILA DES  T GKRLASI ++N E NRQA R+LL T+P    Y+SG ILFEETLYQ +++GK FV+ L+E  ++PGIKVDKG+V L  ++ E+  QG D L +R  +YYK GARFAKWR V+ I P  PS L++++
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQ 161          
The following BLAST results are available for this feature:
BLAST of FC931518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC3_ARATH1.715e-8681.50Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_ORYSJ1.437e-7376.34Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC_SPIOL1.712e-7169.65Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC2_ARATH2.233e-7169.46Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH2.912e-7170.85Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA6.464e-7183.54Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA1.004e-6882.58Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_CHLRE1.233e-5770.89Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH8.289e-4660.39Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA1.563e-4456.41Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC34106A02EF PostHarvP1 Citrus clementina cDNA clone C34106A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931518 ID=FC931518; Name=FC931518; organism=Citrus clementina; type=EST; length=709bp
GTGACTCCACCTCCGAAGAAAAAGTGCAACTGATCTTAGAAGGCCACGAA
AAGTCGGATCCTCGAAATAATCACAAGCAACAATGGCCTGTGCAAGTTTT
GCGAAGCTAAATGCTGCGTCGTCTCAGTGGATCGGTCAACAGTCCTTCAC
TCAACGCACCGGATCTTCTTCTTCGACTCGATTCGCGACTCGCCGCGTCT
CCGTACCGATCCGAGCTGGTGCTTACACTGAGGAACTCGTCAAAACCGCT
AAAACAATTGCATCACCTGGTCGCGGTATTCTAGCAATTGATGAATCAAA
TGCAACCTGTGGGAAGAGGTTGGCATCGATTGGATTGGACAATACAGAGA
CCAATAGACAGGCTTACAGGCAACTTTTGCTGACCACTCCAGGCCTTGGT
GATTATATTTCTGGTGCCATTCTTTTCGAGGAGACACTGTACCAATCAAC
TACAGATGGAAAAAAGTTTGTGGACTGCTTGCGTGAGGAAAAGATCGTGC
CTGGCATTAAAGTTGACAAGGGTTTGGTTCCTCTACCAGAATCAAACAAT
GAATCGTGGTGCCAAGGCTTGGATGGATTGGCATCAAGATCCACTGAATA
CTACAAGCAAGGTGCTCGATTTGCTAAGTGGAGGACAGTTGTTAGCATTC
CATGTGGTCCTTCTGCTCTGGCTGTGAAGGAGCTGCATGGGGCCTTGCAC
GATATGCTG
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