FC931539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 71/229 (31.00%), Postives = 101/229 (44.10%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC-VSNELQSGKSRDI---------NYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES RY L G +A L++IA NG +P G L+ + R ED K D L SP+ +TLLLW ++F NAFSYYGLVLLTTEL + C +SN+ ++ K + +Y D+ T+ +EFPGLL+ ++DR+GRK +M+ F + L + + T LF AR I+ Sbjct: 260 ESARYEVLSGNQEKALATLKRIATENGAPMPLGKLI--------------------------VSRQED------RGKIRD------------------LFSPQFRCTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISNQRKAVKPKCSLACEYLTVEDYTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTVFLFIARAFIS 438
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 66/226 (29.20%), Postives = 97/226 (42.92%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKCVSNELQSGKSRDI-------NYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES R+ G A L+ A++N +LP+G LVS ST A S G A LLSP+L K+T+LLW ++ AFSYYG+VL TT L ++C +G ++ +Y D+ T+ AEFPGL++ +++ GRK +M+ + IF L F + T L+F AR I+ Sbjct: 259 ESARFDMASGHPERALETLQAAARMNRVQLPTGRLVS---------------------------------------------STKAGSESRGDIA--NLLSPDLRKTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFIS 437
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 69/229 (30.13%), Postives = 102/229 (44.54%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC-VSNELQSGKSR---------DINYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES RY L G +A L++IA NG +P G L+ + R ED K D L +P +TLLLW ++F NAFSYYGLVLLTTEL + C +S+ ++ +++ + +Y D+ T+ +EFPG+L+ ++DRLGRK +M+ F + L + + T LLF AR I+ Sbjct: 260 ESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI--------------------------ISRQED------RGKMRD------------------LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFIS 438
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 69/229 (30.13%), Postives = 102/229 (44.54%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC-VSNELQSGKSR---------DINYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES RY L G +A L++IA NG +P G L+ + R ED K D L +P +TLLLW ++F NAFSYYGLVLLTTEL + C +S+ ++ +++ + +Y D+ T+ +EFPG+L+ ++DRLGRK +M+ F + L + + T LLF AR I+ Sbjct: 260 ESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI--------------------------ISRQED------RGKMRD------------------LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFIS 438
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 70/229 (30.57%), Postives = 102/229 (44.54%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC-VSNELQSGKSR---------DINYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES RY L G +A L++IA NG +P G L+ + R ED K D L +P +TLLLW ++F NAFSYYGLVLLTTEL + C +S+ ++ +++ +Y D+ T+ +EFPG+L+ V+DRLGRK +M+ F + + L + + T LLF AR I+ Sbjct: 260 ESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI--------------------------ISRQED------RGKMRD------------------LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFIS 438
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 69/229 (30.13%), Postives = 102/229 (44.54%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC-VSNELQSGKSR---------DINYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES RY L G +A L++IA NG +P G L+ + R ED K D L +P +TLLLW ++F NAFSYYGLVLLTTEL + C +S+ ++ +++ + +Y D+ T+ +EFPG+L+ ++DRLGRK +M+ F + L + + T LLF AR I+ Sbjct: 260 ESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI--------------------------ISRQED------RGKMRD------------------LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFIS 438
BLAST of FC931539 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.120e-15 Identity = 70/229 (30.57%), Postives = 102/229 (44.54%), Query Frame = 1 Query: 1 ESPRYLCLKGRTAEARHVLEKIAKINGTKLPSGNLVSDWEHELQNKXXXXXXXNEDDTTPTEMERDEDSISEAKEMKSEDSTSTLANSNMGGITALLMLLSPELIKSTLLLWLVFFGNAFSYYGLVLLTTELNNGQNKC-VSNELQSGKSR---------DINYGDVFITSFAEFPGLLLAAAVVDRLGRKLSMSSMFFCCCIFLVPLLFQQPKGLTTGLLFGARICIT 657 ES RY L G +A L++IA NG +P G L+ + R ED K D L +P +TLLLW ++F NAFSYYGLVLLTTEL + C +S+ ++ +++ +Y D+ T+ +EFPG+L+ V+DRLGRK +M+ F + + L + + T LLF AR I+ Sbjct: 260 ESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI--------------------------ISRQED------RGKMRD------------------LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFIS 438 The following BLAST results are available for this feature:
BLAST of FC931539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931539 ID=FC931539; Name=FC931539; organism=Citrus clementina; type=EST; length=680bpback to top |