FC931551

Overview
NameFC931551
Unique NameFC931551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:1..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 8.936e-110
Identity = 189/215 (87.91%), Postives = 196/215 (91.16%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPE+RIKVRIVSARAYHSLFMHNMCIRPT+ ELEDFGTPDFTIY+AGQFPCNRYTHYMTSSTSID+NL RKEMVILGTQYAGEMKKGLFSLMHYLMP RQILSLHSGCNMGK+GDVA               DHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLEN+VFDEHTREVDY +KSVTENTRAAYPIEYI
Sbjct:  248 DPENRIKVRIVSARAYHSLFMHNMCIRPTAGELEDFGTPDFTIYHAGQFPCNRYTHYMTSSTSIDMNLDRKEMVILGTQYAGEMKKGLFSLMHYLMPMRQILSLHSGCNMGKNGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENVVFDEHTREVDYSEKSVTENTRAAYPIEYI 462          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.524e-109
Identity = 185/215 (86.05%), Postives = 196/215 (91.16%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPE+RIKVRIVSARAYHSLFMHNMCIRPT EELE FGTPDFTIYNAGQFPCNRYTHYMTSSTS+D+NLAR+EMVILGTQYAGEMKKGLFS+MHYLMPKR+ILSLHSGCNMGKDGDVA               DHNRYLIGDDEHCW++ GVSNIEGGCYAKC+DLSREKEPDIWNAIKFGTVLEN+VFDEHTREVDY DKSVTENTRAAYPIE+I
Sbjct:  249 DPENRIKVRIVSARAYHSLFMHNMCIRPTQEELESFGTPDFTIYNAGQFPCNRYTHYMTSSTSVDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRRILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPDIWNAIKFGTVLENVVFDEHTREVDYSDKSVTENTRAAYPIEFI 463          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 4.903e-108
Identity = 184/215 (85.58%), Postives = 193/215 (89.77%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPE+RIKVRI+SARAYHSLFMHNMCIRPT EELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSID+NLAR+EMVI+GTQYAGEMKKGLF +MHYLMPKR ILSLHSGCNMGKDGDVA               DHN  LIGDDEHCWSDNGVSNIEGGCYAKCIDL++EKEPDIWNAIKFGTVLEN+VFDEHTREVDY D SVTENTRAAYPIEYI
Sbjct:  244 DPENRIKVRIISARAYHSLFMHNMCIRPTDEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVIMGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNGLLIGDDEHCWSDNGVSNIEGGCYAKCIDLAQEKEPDIWNAIKFGTVLENVVFDEHTREVDYADYSVTENTRAAYPIEYI 458          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.528e-101
Identity = 173/215 (80.47%), Postives = 190/215 (88.37%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DPE+RIKVRI+++RAYH+LFMHNMCIRPT EELE FGTPDFTIYNAG+FP NRY +YMTSSTSI+I+LAR+EMVILGTQYAGEMKKGLF +MHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCWSDNGVSNIEGGCYAKCIDLS+EKEPDIWNAI FGTVLEN+VF+E TREVDY DKS+TENTRAAYPIE+I
Sbjct:  202 DPENRIKVRIITSRAYHALFMHNMCIRPTEEELETFGTPDFTIYNAGEFPANRYANYMTSSTSINISLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSKEKEPDIWNAITFGTVLENVVFNERTREVDYADKSITENTRAAYPIEFI 416          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 2.606e-101
Identity = 173/215 (80.47%), Postives = 190/215 (88.37%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            D E+RIKVRI+++RAYH+LFMHNMCIRPT EELE FGTPDFTIYNAG+FP NRY +YMTSSTSI+I+LAR+EMVILGTQYAGEMKKGLF +MHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCWSDNGVSNIEGGCYAKCIDLS+EKEPDIWNAIKFGTVLEN+VF+E TREVDY DKS+TENTRAAYPIE+I
Sbjct:  204 DSENRIKVRIITSRAYHALFMHNMCIRPTEEELESFGTPDFTIYNAGEFPANRYANYMTSSTSINISLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGTVLENVVFNERTREVDYADKSITENTRAAYPIEFI 418          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA2_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salinibacter ruber (strain DSM 13855) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 6.246e-79
Identity = 133/215 (61.86%), Postives = 168/215 (78.14%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP HR+KVRI+ +R YH+LFMHNM IRP+ EEL  FG PDF IYNAG+FP NR T +M+S TS+D++   +EMVILGT+YAGEMKKG+F++MHYLMPK+ +LS+H   N G +GDV+               D NR LIGDDEHCWSD+GV NIEGGCYAK + LS E+EP+I+NAI++GTVLEN+V+DE TR VDY D S+T+NTRA+YP++YI
Sbjct:  112 DPAHRLKVRIICSRPYHALFMHNMLIRPSQEELASFGEPDFVIYNAGEFPANRQTKHMSSKTSVDLSFENQEMVILGTEYAGEMKKGVFTVMHYLMPKKDVLSMHCSANEGDEGDVSLFFGLSGTGKTTLSADPNRKLIGDDEHCWSDDGVFNIEGGCYAKAVGLSEEEEPEIYNAIRYGTVLENMVYDEDTRAVDYDDTSITQNTRASYPLDYI 326          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.009e-77
Identity = 140/217 (64.52%), Postives = 170/217 (78.34%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTS-EELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKD-GDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP++RIKVR++ ARAYH+LFMHNM IRP + EEL +FG PD+TIYNAGQFP NRYT  M+SS+SI I+ ARKEMVILGTQYAGEMKKG+ ++M YLMPK  +L LHS CN  ++ GD                 D NR LIGDDEH W+D G  NIEGGCYAKCIDLSREKEP+I++AIKFG VLEN+V++E++R+VDY D S+TENTR AYP+E+I
Sbjct:  143 DPKYRIKVRVICARAYHALFMHNMLIRPANREELRNFGEPDYTIYNAGQFPANRYTKGMSSSSSIAIDFARKEMVILGTQYAGEMKKGILTIMMYLMPKMGVLPLHSSCNQARNNGDTTLFFGLSGTGKTTLSADINRELIGDDEHVWTDTGCFNIEGGCYAKCIDLSREKEPEIFDAIKFGAVLENVVYNEYSRKVDYNDVSITENTRCAYPLEHI 359          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_KLULA (Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyveromyces lactis GN=PCK1 PE=3 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 5.846e-77
Identity = 138/217 (63.59%), Postives = 168/217 (77.42%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +RIKVR+V ARAYH+LFM NM IRP+ EELE+FG PDFT++NAGQFP N +T  MTS T+++IN  + EMVILGT+YAGEMKKG+F++M YLMP    +L+LHS  N G +D DV                D +R LIGDDEHCWSD+GV NIEGGCYAKC+ LS EKEP+I+NAIKFG+VLENI++D +TREVDY D ++TENTR AYPIEYI
Sbjct:  122 DPRYRIKVRVVCARAYHALFMTNMLIRPSKEELENFGEPDFTVWNAGQFPANTHTSGMTSKTTVEINFKQMEMVILGTEYAGEMKKGIFTVMFYLMPVNHNVLTLHSSANQGIQDNDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCLGLSAEKEPEIFNAIKFGSVLENIIYDPNTREVDYEDSTITENTRCAYPIEYI 338          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CANAL (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida albicans GN=PCK1 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 9.972e-77
Identity = 139/217 (64.06%), Postives = 167/217 (76.96%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP +RIKVRI+ ARAYH+LFM NM IRPT EEL++FG PDFTIYNAGQFP N +T  MTS+TS++IN    EMVILGT+YAGEMKKG+F++M YLMP K ++L+LHS CN G + GDV                D  R LIGDDEHCWSDNGV NIEGGCYAKC+DLS EKEP+I+N+IKFG +LEN+V+   T+ VDY D S+TENTR AYPI++I
Sbjct:  133 DPSYRIKVRIICARAYHALFMTNMLIRPTEEELKNFGEPDFTIYNAGQFPANIHTKGMTSATSVEINFKDMEMVILGTEYAGEMKKGIFTVMFYLMPIKHKVLTLHSSCNQGVEKGDVTLFFGLSGTGKTTLSADPQRKLIGDDEHCWSDNGVFNIEGGCYAKCLDLSAEKEPEIFNSIKFGAILENVVYXXITKVVDYGDSSITENTRCAYPIDFI 349          
BLAST of FC931551 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.901e-76
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2
Query:    2 DPEHRIKVRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 646
            DP++RIKVR+V ARAYH+LFM NM IRPT EEL +FG PDFT++NAGQFP N  T  MTS T+I+IN    EMVILGT+YAGEMKKG+F++M YLMP    +L+LHS CN G K+GDV                D +R LIGDDEHCWSD GV NIEGGCYAKCI+LSREKEP+I++AI+FG+VLEN+++D  + EVDY D S+TENTR AYPI++I
Sbjct:  124 DPKYRIKVRVVCARAYHALFMTNMLIRPTEEELANFGEPDFTVWNAGQFPANARTQDMTSKTTIEINFKAMEMVILGTEYAGEMKKGIFTVMFYLMPVHHNVLTLHSSCNQGIKNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDEGVFNIEGGCYAKCINLSREKEPEIFDAIRFGSVLENVIYDSESHEVDYDDSSITENTRCAYPIDFI 340          
The following BLAST results are available for this feature:
BLAST of FC931551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_CUCSA8.936e-11087.91Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_ARATH1.524e-10986.05Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_MAIZE4.903e-10885.58Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA1_UROPA1.528e-10180.47Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA2_UROPA2.606e-10180.47Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA2_SALRD6.246e-7961.86Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salin... [more]
PCKA_DICDI2.009e-7764.52Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_KLULA5.846e-7763.59Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyver... [more]
PCKA_CANAL9.972e-7764.06Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_CANGA2.901e-7663.13Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]

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Properties
Property NameValue
Genbank descriptionC34106D04EF PostHarvP1 Citrus clementina cDNA clone C34106D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931551 ID=FC931551; Name=FC931551; organism=Citrus clementina; type=EST; length=647bp
GGACCCAGAACACCGGATCAAAGTCCGAATTGTTTCTGCCAGAGCTTACC
ATTCCTTGTTCATGCACAACATGTGCATCCGACCCACGTCAGAAGAATTA
GAAGATTTTGGTACTCCGGACTTCACAATATACAATGCTGGGCAGTTTCC
TTGCAACCGTTACACCCACTATATGACTTCCTCTACTAGCATTGACATAA
ATCTTGCTAGGAAAGAAATGGTCATTCTTGGCACCCAGTATGCCGGAGAA
ATGAAGAAAGGTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCA
AATCCTCTCCCTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTG
CCCTTTTCTTCGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGAT
CATAACCGGTACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGG
AGTATCAAACATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAA
GGGAGAAGGAGCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTA
GAAAACATTGTGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAA
ATCTGTCACGGAGAACACTCGTGCCGCGTATCCCATAGAGTATATCC
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