FC931557

Overview
NameFC931557
Unique NameFC931557
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15371 contig Ccv1_Contig15371:243..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 400.979 bits (1029), Expect = 2.954e-111
Identity = 177/223 (79.37%), Postives = 205/223 (91.93%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDFAIRCPMKEKKYTKECA+ +IKSLG+DLKKVD+C+GDPEADV+N VLK EQ++QIGKGSRGDVTILPTLV+NNRQYRGKL+KGAVLKA+C+GFQE+TEPAICL+ED+ETNECLENNGGCWQDKAANITAC+DTFRGR+CECP V+GVKFVGDGYTHC+ASGA  C INNGGCW++ + G ++SACV++    CKCP GF+GDGV NCEDVDEC+EK  CQC
Sbjct:  302 TDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIGDPEADVENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENNGGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQC 524          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.191e-106
Identity = 168/223 (75.34%), Postives = 197/223 (88.34%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDF IRCPMKEKKY KECA+ VIKSLG+D KK+D+C+GDP+AD+DN VLK EQDAQ+GKGSRGDVTILPTLV+NNRQYRGKL+K AVLKA+C+GF+ETTEPAICLS D+E+NECL+NNGGCWQDK+ANITACKDTFRGRVCECP V GV+F GDGY+HCE SG  RC+INNGGCW + +DG +FSACV+     C+CPPGF+GDG   CED++EC+EK ACQC
Sbjct:  307 TDFQIRCPMKEKKYNKECADSVIKSLGIDSKKLDKCMGDPDADLDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTFRGRVCECPTVDGVQFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKACQC 529          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 6.375e-106
Identity = 168/223 (75.34%), Postives = 200/223 (89.69%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDFAIRCPMKE+KY K+CA+QVI+SLGVD+KK+D+C+GD +A+ +N VLK EQ AQ+GKGSRGDVTILPT+VINNRQYRGKL + AVLKA+C+GF+ETTEP ICL+EDIETNECL+NNGGCW+DK  NITAC+DTFRGRVC+CPIV+GVKF+GDGYTHCEASGA RC INNGGCWK+ Q GK++SAC ++   GCKCPPGF GDG+  C+DV+ECEEK ACQC
Sbjct:  306 TDFAIRCPMKEEKYNKKCADQVIQSLGVDVKKIDKCIGDIDANAENPVLKEEQVAQVGKGSRGDVTILPTIVINNRQYRGKLQRSAVLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTFRGRVCQCPIVQGVKFLGDGYTHCEASGALRCGINNGGCWKQTQMGKTYSACRDDHSKGCKCPPGFIGDGLKECKDVNECEEKTACQC 528          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 382.489 bits (981), Expect = 1.087e-105
Identity = 166/223 (74.44%), Postives = 198/223 (88.79%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDF IRCPMKEKKY K+CAE VIKSLG+D +K+D+C+GDP+AD+DN VLK EQDAQ+GKG+RGDVTILPTLV+NNRQYRGKL+K AVLKA+C+GF+E+TEPAICLS D+ETNECL+NNGGCWQDK+ANITACKDTFRG+VC CPIV GV+F GDGY+HCE SG  RC+INNGGCW + +DG +FSACV+     C+CPPGF+GDGV  CED++EC+EK ACQC
Sbjct:  307 TDFQIRCPMKEKKYNKDCAESVIKSLGIDSRKIDKCMGDPDADLDNPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTFRGKVCVCPIVDGVRFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKACQC 529          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 5.966e-104
Identity = 164/223 (73.54%), Postives = 193/223 (86.55%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDF IRCPMKEKKY KECA  VIKSLG+D++K+D+C+GDP AD +N +LK EQDAQIGKG+RGDVTILPTLV+NNRQYRGKL+KGAVLKAIC+GF+ETT+PA+CLS D+ETNECL NNGGCWQDK ANI ACKDTFRGRVCECP+V GV+F GDGYT CE SG  RC INNGGCW   ++G +FSAC+++    C+CP GF+GDGV NCED+DEC++K ACQC
Sbjct:  302 TDFQIRCPMKEKKYNKECANSVIKSLGLDVEKIDKCMGDPNADTENSILKEEQDAQIGKGTRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKTANIAACKDTFRGRVCECPLVDGVQFKGDGYTTCEVSGHGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPAGFKGDGVKNCEDIDECKDKKACQC 524          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 4.011e-92
Identity = 148/223 (66.37%), Postives = 187/223 (83.86%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDF  RC MKEKKY+ +CAE VIKSL + ++K+ +C+GDPEAD +NQVL+TEQ +QIG+G+RGDVTILPTLVINN QYRG+L++ AVLKAICAGF ET+EPAICL+  +ETNECLENNGGCWQD  ANITAC+DTFRGR+CECP+V+GV++ GDGYT C   G +RC++NNGGCW   ++G +FSAC ++   GCKCP GF+GDG+  CED++EC+E+  CQC
Sbjct:  305 TDFHSRCSMKEKKYSIDCAESVIKSLNLPIEKIKKCIGDPEADTENQVLRTEQVSQIGRGNRGDVTILPTLVINNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTFRGRLCECPVVKGVQYKGDGYTSCTPYGPARCTMNNGGCWSDTRNGLTFSACSDSVSTGCKCPEGFQGDGL-TCEDINECKERSVCQC 526          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.434e-89
Identity = 142/223 (63.68%), Postives = 185/223 (82.96%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDF IRC MKEKKY++ECAE +++SLG+ L+K+ +C+GDP+ADV+N+VLK E+  Q+G+ +RG VTI PTL+INN QYRGKL++ AVLKAIC+GF+E TEP+ICL+ DIETNECL  NGGCWQDK +N+TACKDTFRGRVCECP+V GV++ GDGYT C+  G +RCS+NNG CW + + G +FS+C ++   GC+CP GF GDG+  CED+DEC+EK AC+C
Sbjct:  303 TDFNIRCSMKEKKYSRECAETIVESLGLSLEKIKKCIGDPDADVENEVLKAEEAFQLGQENRGIVTIFPTLMINNAQYRGKLERTAVLKAICSGFKERTEPSICLNSDIETNECLIENGGCWQDKRSNVTACKDTFRGRVCECPVVDGVQYKGDGYTSCKPYGPARCSMNNGDCWSETRKGLTFSSCSDSETSGCRCPLGFLGDGL-KCEDIDECKEKSACKC 524          
BLAST of FC931557 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 5.421e-89
Identity = 146/223 (65.47%), Postives = 180/223 (80.72%), Query Frame = 1
Query:    1 TDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQC 669
            TDF IRC MKEKKY+KECAE+V++SLG+ L K+ +C+GDP+A+V+N+VLK EQ  Q+G+G RGDVTILPTL++NN QYRGKL++ AVLKAIC+GF+E TEP ICLS DIETNECLE NGGCW+DK +N+TACKDTFRGRVCECP+V GV++ GDGYT CE  G +RCSIN GGCW + + G +FSAC      GC+CPPGF+GDG+       +CE   ACQC
Sbjct:  304 TDFHIRCSMKEKKYSKECAERVVESLGLPLDKIKKCIGDPDANVENEVLKAEQALQVGQGDRGDVTILPTLIVNNAQYRGKLERNAVLKAICSGFKERTEPGICLSGDIETNECLEANGGCWEDKKSNVTACKDTFRGRVCECPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWSETKKGLTFSACSNLETSGCRCPPGFKGDGL-------KCE---ACQC 516          
The following BLAST results are available for this feature:
BLAST of FC931557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH2.954e-11179.37Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR3_ARATH2.191e-10675.34Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR2_ARATH6.375e-10675.34Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR4_ARATH1.087e-10574.44Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR1_PEA5.966e-10473.54Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR7_ARATH4.011e-9266.37Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH2.434e-8963.68Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR6_ARATH5.421e-8965.47Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC34106D10EF PostHarvP1 Citrus clementina cDNA clone C34106D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931557 ID=FC931557; Name=FC931557; organism=Citrus clementina; type=EST; length=670bp
ACTGACTTTGCAATCCGTTGCCCAATGAAAGAGAAGAAGTACACCAAGGA
GTGTGCAGAGCAAGTTATCAAATCTCTTGGTGTTGACCTCAAGAAGGTAG
ATGAATGTGTTGGAGATCCTGAGGCAGATGTGGACAATCAAGTTCTTAAA
ACCGAACAAGATGCACAGATTGGAAAAGGCTCCCGTGGAGATGTTACTAT
ACTGCCAACACTTGTTATTAACAATAGACAGTATAGAGGTAAGTTGGACA
AGGGAGCAGTTCTCAAGGCTATTTGTGCAGGTTTTCAGGAGACTACAGAG
CCAGCCATATGCTTAAGTGAAGATATTGAAACTAATGAATGCTTAGAAAA
CAATGGTGGGTGCTGGCAGGACAAAGCCGCTAACATAACAGCATGCAAGG
ATACTTTCCGAGGAAGAGTGTGCGAATGTCCTATAGTACGAGGTGTGAAG
TTTGTTGGTGATGGTTATACTCATTGTGAAGCTTCAGGAGCTTCACGCTG
TTCAATTAATAATGGAGGGTGTTGGAAGAAAATCCAAGATGGCAAATCTT
TTTCTGCTTGTGTTGAGAATAGCTTGCATGGTTGCAAGTGTCCACCTGGA
TTTAGGGGTGATGGAGTCAACAACTGTGAAGATGTGGATGAGTGCGAAGA
GAAGCTGGCATGTCAATGCC
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