FC931562

Overview
NameFC931562
Unique NameFC931562
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15352 contig Ccv1_Contig15352:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIC1_ARATH (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.784e-85
Identity = 155/184 (84.24%), Postives = 168/184 (91.30%), Query Frame = 1
Query:  115 AAASDSIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            A  S+S+ PRDVCIVGVARTPMGGFLG+LSSL ATKLGS+AI AALKRANVDP+LVQEV FGNVLSANLGQAPARQAALGAGIPNSV+CTTVNKVCASG+KA+M+A+QSIQLGINDV+VAGGMESMSN PKYLAEARKGSR GHDSLVDGMLKDGLWDVYNDC MG+CAELCAE      +Q D
Sbjct:    2 AHTSESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQD 185          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIC2_ARATH (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.748e-79
Identity = 138/187 (73.80%), Postives = 169/187 (90.37%), Query Frame = 1
Query:  106 MAPAAASDSIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            MAP  + DS++PRDVC+VGVARTP+G FLG+LSSL+AT+LGSIAI+AALKRA+VDP+LV+EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTT+NKVCA+G+K++MLASQSIQLG+ND++VAGGMESMSN PKYL +AR+GSRLGHD++VDGM+KDGLWDVYND  MG C E+CA+      ++ D
Sbjct:    1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQD 187          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.058e-52
Identity = 106/176 (60.23%), Postives = 130/176 (73.86%), Query Frame = 1
Query:  145 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCA-EHIX*QGDQDDF 669
            +V IV   RTPMG F G+ +SL ATKLGSIAI+ AL+R N+ PS V EVF GNV+SANLGQ PARQ ALGAG+P S+VCTTVNKVCASG+KA +L +Q+I  G  +++VAGG ESMSNAP Y  + R G++ G+  LVDG+L+DGL D Y+   MG  AELCA EH   +  QD F
Sbjct:    5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLGQNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAPYYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAF 180          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.805e-45
Identity = 94/176 (53.41%), Postives = 126/176 (71.59%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCA-EHIX*QGDQDDF 669
            V IV  ARTP+G F G+LSSL+ + LG+ A++AAL +   + P  V E+ FG VL AN+GQAPARQ AL AG+P+S+V +T+NKVCASG+KA+++ +Q+I  G +D++V GG ESMSN P YL  AR G+R G   +VDG+ KDGL DVY +  MG  AE CA +H   + DQD+F
Sbjct:    6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIVASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPYYLPSARSGARYGDAIMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNF 181          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 6.275e-45
Identity = 93/176 (52.84%), Postives = 126/176 (71.59%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCA-EHIX*QGDQDDF 669
            V IV  ARTP+G F G+LSSL+ + LG+ A++AAL +   + P  V E+ FG VL AN+GQAPARQ AL AG+P+S++ +T+NKVCASG+KA+++ +Q+I  G +D++V GG ESMSN P YL  AR G+R G   +VDG+ KDGL DVY +  MG  AE CA +H   + DQD+F
Sbjct:    6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIIASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPYYLPSARSGARYGDAVMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNF 181          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.826e-44
Identity = 88/173 (50.87%), Postives = 117/173 (67.63%), Query Frame = 1
Query:  148 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            V IV   RTP+G   G+LS++  TKL SI IE A+KRA + PS V E   GNV+SANLGQAPARQ ALGAG+    + TT+NKVC+SG+KAI+  +QSI LG +  +VAGG ESMS  P Y  + R G++ G+ + +DG+++DGL D YN  +MG C + CA+      +Q D
Sbjct:   26 VVIVSAVRTPIGSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQAPARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMSQVPYYADKMRFGAKYGNQTFIDGLVRDGLADAYNGSAMGVCGDDCADKYKITREQQD 198          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.183e-43
Identity = 93/174 (53.45%), Postives = 120/174 (68.97%), Query Frame = 1
Query:  145 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            DV IV   RTP+G FLG+L+S  ATKLG+IAI+ A+++A +    V+EV+ GNV+    GQAP RQA LGAG+P +  CTTVNKVCASG+KAIM+ASQS+  G  DV+VAGGMESMSN P  +  +R  +  G   L D ++KDGL DVYN   MG CAE  A+ +    ++ D
Sbjct:   38 DVVIVSATRTPIGSFLGSLASQPATKLGTIAIQGAIEKAGIPKEEVKEVYMGNVIQGGEGQAPTRQATLGAGLPIATPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVM--SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLSISREEQD 209          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_HUMAN (Acetyl-CoA acetyltransferase, mitochondrial OS=Homo sapiens GN=ACAT1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.183e-43
Identity = 94/175 (53.71%), Postives = 120/175 (68.57%), Query Frame = 1
Query:  142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            ++V IV   RTP+G FLG+LS L ATKLGSIAI+ A+++A +    V+E + GNVL    GQAP RQA LGAG+P S  CTT+NKVCASG+KAIM+ASQS+  G  DV+VAGGMESMSN P  +   R  +  G   L D ++KDGL DVYN   MG+CAE  A+ +    ++ D
Sbjct:   40 KEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVM--NRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQD 212          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_BOVIN (Acetyl-CoA acetyltransferase, mitochondrial OS=Bos taurus GN=ACAT1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.183e-43
Identity = 94/174 (54.02%), Postives = 119/174 (68.39%), Query Frame = 1
Query:  145 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            +V IV   RTP+G FLG+LSSL ATKLGSIAI+ A+++A +    V+E + GNVL    GQAP RQA LGAG+P S  CTT+NKVCASG+KAIM+ASQ++  G  DV+VAGGMESMSN P  +   R  +  G   L D ++KDGL DVYN   MG CAE  A+ +    ++ D
Sbjct:   36 EVVIVSAIRTPIGSFLGSLSSLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQNLMCGHQDVMVAGGMESMSNVPYVM--NRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKLNITREEQD 207          
BLAST of FC931562 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 7.671e-43
Identity = 94/177 (53.11%), Postives = 124/177 (70.06%), Query Frame = 1
Query:  142 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSL-VQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEHIX*QGDQDD 666
            ++V IV  ARTP+G F G+LSS +A +LG++A++ AL +   +D S    E+ FGNVLSANLGQAPARQ AL AG+ N +V +TVNKVCAS +KAI+L +QSI+ G  DV+VAGG ESM+NAP Y+  AR G++ G   LVDG+ +DGL D Y+  +MG  AE CA       +Q D
Sbjct:    3 QNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGALAKVPELDASKDFDEIIFGNVLSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQD 179          
The following BLAST results are available for this feature:
BLAST of FC931562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
THIC1_ARATH2.784e-8584.24Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabi... [more]
THIC2_ARATH1.748e-7973.80Probable acetyl-CoA acetyltransferase, cytosolic 2... [more]
THIL_SCHPO4.058e-5260.23Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIA_CANTR4.805e-4553.41Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
THIB_CANTR6.275e-4552.84Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL1_DICDI1.826e-4450.87Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
THIL_RAT1.183e-4353.45Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]
THIL_HUMAN1.183e-4353.71Acetyl-CoA acetyltransferase, mitochondrial OS=Hom... [more]
THIL_BOVIN1.183e-4354.02Acetyl-CoA acetyltransferase, mitochondrial OS=Bos... [more]
THIL_YEAST7.671e-4353.11Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]

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Properties
Property NameValue
Genbank descriptionC34106E05EF PostHarvP1 Citrus clementina cDNA clone C34106E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931562 ID=FC931562; Name=FC931562; organism=Citrus clementina; type=EST; length=669bp
ATTTCCTCAGCACGACATTTCTGCGCTTCCACCCGCAAAAACCATCTCCT
CCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATT
GACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTT
TGTATTGTCGGGGTTGCTCGTACACCAATGGGTGGATTTCTTGGTACTCT
ATCTTCCTTATCTGCTACCAAGCTTGGATCTATCGCTATTGAAGCTGCTC
TTAAGAGAGCAAATGTTGATCCATCACTTGTACAAGAAGTTTTCTTTGGT
AATGTTCTCAGTGCAAATCTAGGACAGGCTCCTGCTAGACAGGCTGCATT
GGGTGCAGGAATTCCGAATTCAGTGGTCTGTACTACTGTTAACAAAGTTT
GTGCATCAGGGCTGAAAGCTATAATGCTTGCATCACAGAGTATCCAGTTG
GGGATCAATGATGTCATTGTGGCTGGAGGAATGGAAAGCATGTCTAACGC
ACCTAAATATTTGGCAGAAGCGAGAAAGGGGTCTCGACTTGGACATGATT
CTCTGGTTGATGGAATGCTTAAAGATGGATTATGGGATGTTTATAATGAT
TGTAGCATGGGAACTTGTGCTGAACTTTGTGCTGAACACATTNCATAACA
GGGAGATCAGGATGACTTT
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