FC931564

Overview
NameFC931564
Unique NameFC931564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14254 contig Ccv1_Contig14254:1041..1746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.584e-57
Identity = 115/242 (47.52%), Postives = 151/242 (62.40%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            GIQGP Y G+G FH R V+YGL LD +   G++          E+ L ++FGNSKE +KS    L+ K      N+  SL+ A  +  C YEY +SWG  +G LY +T ED  T + IHS+GW S Y  P P AFLGC    GP  M QQ+RWATGLLEILF+K++P++     K++FRQ LAYL++ +WGLRSIPEL Y  LPAYC++ NS   PK     ++I   L  I+ LYTL E++
Sbjct:  352 GIQGPQYAGSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREFGNSKEMVKSVVDALQRKPFP-QKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLGIII--TLVGIHCLYTLWEFM 590          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.861e-57
Identity = 110/242 (45.45%), Postives = 154/242 (63.64%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            GIQGP Y G+G FH R V+YGL +D +E  G++          E+ L ++FGNS E + S  + L+ K    ++ ++ SL+ A  V  C +EY +SWG  +G LY +TAED  T + IHS+GW S Y  P P AFLG   P GP  M QQ+RWATGLLE+LF+K++P++     K++FRQ LAYL+I TWGLRSIPEL Y  LPAYC++ N+   PK     +++   L  ++ LY+L E++
Sbjct:  352 GIQGPTYAGSGCFHTRRVMYGLSIDDLEDDGSLSSLATRKYLAEENLAREFGNSNEMVTSVVEALQRKPNPQNT-LANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPKGVYLGIVV--TLVGMHCLYSLWEFM 590          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.358e-55
Identity = 113/235 (48.09%), Postives = 140/235 (59.57%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSS-NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQ 704
            G+QG FY GTG FHRR V+YG+   +    G     EL  KFG+S  F +SA   + G        +IS  +D A  VA C YE G+ WG EVG +YG+  ED LTG  IH+ GWRS      P AF+GCA   GPA + Q KRWA+G LEIL S+ NPIL T    LQFRQCLAYL    W +R+  ELCY  L  YC+++N +FLPK  E    I LALF+ Y  Y  +E+I+
Sbjct:  357 GLQGIFYCGTGCFHRRKVIYGMRTGREGTTGYSSNKELHSKFGSSNNFKESARDVIYGNLSTEPIVDISSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFELCYALLGPYCLLSNQSFLPKTSEDGFYIALALFIAYNTYMFMEFIE 591          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 3.652e-54
Identity = 111/238 (46.64%), Postives = 147/238 (61.76%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLC-----LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            G+QG FY GTG FHRR  VYG+       ++ +  G+    EL  +FGNS+E  +SA   +   +     +IS  ++ A  V+ C Y+ G+ WG EVG +YG+  ED LTG  IH+ GWRS   +  P AF+G A   GPA + Q KRWATG  EI+ S+ NPILAT+  +L+FRQCLAYL +L W LR+  ELCY  L  YCI+TN +FLPK  E    +PLALF+ Y  Y  +EY+
Sbjct:  364 GVQGAFYAGTGCFHRRKAVYGVPPNFNGAEREDTIGSSSYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYM 601          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.652e-54
Identity = 111/238 (46.64%), Postives = 147/238 (61.76%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLC-----LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            G+QG FY GTG FHRR  VYG+       ++ +  G+    EL  +FGNS+E  +SA   +   +     +IS  ++ A  V+ C Y+ G+ WG EVG +YG+  ED LTG  IH+ GWRS   +  P AF+G A   GPA + Q KRWATG  EI+ S+ NPILAT+  +L+FRQCLAYL +L W LR+  ELCY  L  YCI+TN +FLPK  E    +PLALF+ Y  Y  +EY+
Sbjct:  364 GVQGAFYAGTGCFHRRKAVYGVPPNFNGAEREDTIGSSSYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYM 601          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 200.29 bits (508), Expect = 8.419e-51
Identity = 110/238 (46.22%), Postives = 138/238 (57.98%), Query Frame = 3
Query:    9 QGPFYQGTGTFHRRDVVYGLCLDQIE-----HQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSS-NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQ 704
            +G FY GTG FH R  +YG+  D I        G+    EL  KF +S+E  +SA   + G   G    +IS  ++ A  V+ C YE G+ WG EVG  YG+  ED LTG  IH+ GWRS      P AFLGCA   GPA + Q KRWATGL EIL S+ NP+L ++   LQFRQCLAYL +  W +R   ELCY  L  YC++TN +FL K  E    I LALFL Y  Y  +EY++
Sbjct:  396 KGLFYGGTGCFHCRKAIYGIEPDSIVVGREGAAGSPSYKELQFKFESSEELKESARYIISGDMSGEPIVDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYLTLYVWAVRGFVELCYELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYME 633          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.074e-49
Identity = 105/242 (43.39%), Postives = 147/242 (60.74%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            GIQGPFY GTG FH R V+YGL  D +E  GNI          ED L++K+GNSKE +KS    L+ K+    S ++  ++ A  V  C YEY +SWG+ +G +Y + AED  T + IH +GW S +  P P AF+G     G   + QQ+RWATG +E+LF+K++P +    GK++FRQ LAY W L   LRSIPEL Y  LPAYC++ +S   PK   P +   + L  ++ LY+L +++
Sbjct:  352 GIQGPFYIGTGCFHTRRVMYGLSSDDLEDNGNISQVATREFLAEDSLVRKYGNSKELVKSVVDALQRKSNPQKS-LANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHGKIKFRQRLAYFWALMC-LRSIPELIYCLLPAYCLLHDSALFPK--GPCLCTIVTLVGMHCLYSLWQFM 588          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.911e-48
Identity = 107/242 (44.21%), Postives = 146/242 (60.33%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            GIQGP Y G+G  H R V+YGL  D  E  G++         V+D L ++FGNSKE +KS    ++ +     + ++ S++ A  V  C YEY +SWG+ +G LY + AED  T + IHS+GW S Y  P   AFLG      P  + QQ+RWATG +EILF+K++P+      K++FRQ LAYL I+T  LRSIPEL Y  LPAYC++ NST  PK     + I + L  I+ LYTL E++
Sbjct:  353 GIQGPIYIGSGCVHTRRVMYGLSPDDFEVDGSLSSVATREFLVKDSLARRFGNSKEMMKSVVDAIQ-RNPNPQNILTNSIEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLRGLFSKKIRFRQRLAYLCIITC-LRSIPELIYCLLPAYCLLHNSTLFPK--GLYLGITVTLVGIHCLYTLWEFM 590          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.138e-47
Identity = 103/242 (42.56%), Postives = 148/242 (61.16%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIV---------EDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            GIQGP Y G+G FH R V+YGL  D +E  G++          ED L++K+G+SKE +KS    L+ K+    S ++  ++ A  V  C YEY +SWG+ +G LY + AED  T + IH +GW S +  P P AFLG     GP  + Q +RWATG +E+LF+K++P++     K++FRQ LAY W+L   +RSIPEL Y  LPAYC++ NS   PK   P + I + L  ++ LYTL +++
Sbjct:  352 GIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVASREFLSEDSLVRKYGSSKELVKSVVDALQRKSNPQKS-LANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPLIG-FRRKIKFRQRLAYFWVLMC-IRSIPELVYCLLPAYCLLNNSALFPK--GPCLGIIVTLVGMHCLYTLWQFM 587          
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.375e-47
Identity = 104/242 (42.98%), Postives = 144/242 (59.50%), Query Frame = 3
Query:    3 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYI 701
            GIQGP   G+G FH R V+YGL  D++E  G++          ED L   FGNSKE + S  + L+ K    +  ++ S++ A  V  C YE  +SWG  +G LY + +ED  T + IHS+GW S Y  P P AFLG   P G   M QQ+RWATG +E+LF+K++P+L     KL+FRQ +AYL + +  +RSIPEL Y  LPAYC++ NS   PK     + I + L  ++ LYTL E++
Sbjct:  352 GIQGPINVGSGCFHSRRVMYGLSPDELEDNGSLSSVATRELLAEDSLSSGFGNSKEMVTSVVEALQRKPNPQNI-LTNSIEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIGIHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEVLFNKQSPLLGLFCRKLRFRQRVAYLCV-SICVRSIPELIYCLLPAYCLLHNSALFPK--GLCLGITMLLAGMHCLYTLWEFM 589          
The following BLAST results are available for this feature:
BLAST of FC931564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB4_ARATH1.584e-5747.52Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH7.861e-5745.45Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLH1_ORYSJ7.358e-5548.09Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLH2_ORYSJ3.652e-5446.64Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI3.652e-5446.64Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH3_ORYSJ8.419e-5146.22Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLB5_ARATH2.074e-4943.39Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLB1_ARATH3.911e-4844.21Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLB6_ARATH1.138e-4742.56Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLB2_ARATH7.375e-4742.98Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34106E08EF PostHarvP1 Citrus clementina cDNA clone C34106E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931564 ID=FC931564; Name=FC931564; organism=Citrus clementina; type=EST; length=706bp
GGGGAATTCAAGGACCTTTCTATCAGGGTACAGGAACTTTTCATAGACGA
GATGTTGTATATGGTCTATGCCTCGATCAGATTGAACATCAAGGAAATAT
AGTGGAAGATGAGCTGCTGAAAAAATTCGGAAATTCAAAAGAATTCATCA
AATCAGCTGCTCAGACTTTGGAAGGGAAGACAGGAGGTTATTCAAGTAAC
ATATCGAGATCGCTTGATGAAGCACACCGAGTTGCAGATTGTGGTTATGA
GTATGGTAGTAGCTGGGGTGATGAGGTGGGGTGCTTGTATGGCGCCACAG
CAGAAGATAACTTAACTGGCTTGGTGATCCATTCAAAAGGCTGGAGATCA
GGCTACTGCTTGCCGATCCCACATGCCTTTCTTGGCTGTGCGTCTCCCAG
CGGCCCTGCTGGGATGAGACAACAGAAAAGGTGGGCCACGGGACTGCTTG
AAATCCTATTCAGCAAACGTAACCCCATATTGGCTACTCTCATCGGGAAG
CTCCAATTTCGACAATGTTTGGCTTATTTGTGGATCCTTACTTGGGGCTT
GCGCTCAATTCCCGAGCTGTGCTACATTGCCCTTCCAGCTTATTGCATCA
TCACCAACTCCACTTTCCTGCCAAAGGTCCAGGAACCAACCGTATTGATC
CCTCTTGCACTTTTTTTGATCTACAAATTATATACTCTATTAGAGTACAT
TCAAGC
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