FC931577

Overview
NameFC931577
Unique NameFC931577
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS217_ARATH (21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.523e-63
Identity = 117/178 (65.73%), Postives = 141/178 (79.21%), Query Frame = 1
Query:   52 IKLEVHTDDRTPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVE-NGKIVEISGQWKEQRDPRA-KDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSND---VFLEIRIPK 570
            +KLE+HTDD+TP KW V LG+DVFRRFLS G  +    FG+GSLFSP LFGK+FDPSDAFPLWEFE++VLL+ L+S GQ  VDW QTDQAYVLK+++P VGKN VQV V+ NG+++EISGQW   +      DWRSG WWEHG+VRRLELP DAD + +EA+LSN+    FLEIRIPK
Sbjct:    8 LKLEIHTDDKTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSDAFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEISGQWNSNKKAATNSDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRIPK 185          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS223_ORYSJ (22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica GN=HSP22.3 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.632e-44
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1
Query:   52 IKLEVHTDDRTPHKWIVALGEDVFRRFLSQ-------GNPAVHKAFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENG-KIVEISGQWK---EQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSN-DVFLEIRIPKNPSTCDISHGNGAAT 615
            I++     D    +W ++L E+ F  FL            A    FG+GSLFSP LFGKFFDP+DAFPLWEFE +VLL+ L+   +++VDW +TD  Y L+A++PG  K  V+VS ++  ++V++SG W+       P  +DWR+G WWEHGFVRR+ELPEDADWRK EA+  + +  LEI++PK+      +H   AAT
Sbjct:    7 IEVRQAVGDGAAPRWRMSLLENTFSSFLQSIGGGVAADGAAARAVFGEGSLFSPFLFGKFFDPADAFPLWEFEPEVLLAALRRGARTTVDWAETDSEYYLRADIPGGRKCDVEVSGDDAMRVVDVSGLWRAAPPPPPPDGRDWRAGRWWEHGFVRRVELPEDADWRKVEAFFDDGEGLLEIKVPKSGD----AHQAAAAT 202          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13
Identity = 35/92 (38.04%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  295 VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            +DW +T QA+V KA+LPG+ K +V+V VE GK+++ISG+  ++++ +   W    +    F+RR  LPE+A+  + +A + N V L + +PK
Sbjct:   54 IDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGV-LTVTVPK 144          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13
Identity = 41/134 (30.60%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  178 SLFSPLLFGKFFDPSDAFP--LWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKN 573
            ++F P    + +DP    P  L         +   +   + +DW +T +A+V KA+LPGV K +V+V VE+G ++ ISGQ   +++ +   W         F+R+  LPE+A   + +A + N V L + +PKN
Sbjct:   16 NIFDPFSLDEIWDPFFGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGV-LTVTVPKN 148          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:  211 FDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            +DP   FPL    +        +   + +DW +T QA+V KA+LPG+ K +V+V +E GK+++ISG+  ++++ +   W         F+RR  LPE+A   + +A ++N V + + +PK
Sbjct:   24 WDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGV-VTVTVPK 142          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 40/122 (32.79%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  211 FDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKNP 576
            FDP + F      ++     + +   + VDW +T +A+V KA+LPG+ K +V+V VE+G I++ISG+   + + +   W         F RR  LPE+A   + +A + N V L + +PK P
Sbjct:   24 FDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGV-LSVTVPKVP 144          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  178 SLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLQSTG---QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            ++F P  F  F+DP D      F S V  +  + T     + VDW +T +++V KA+LPGV K +V+V VE G ++ ISGQ  ++++ +   W         F+RR  LPE+A   + +A + N V L + +PK
Sbjct:    8 NVFDP--FADFWDPFDGV----FRSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGV-LTVTVPK 134          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  199 FGKFFDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKNP------STCDISHGN 603
            F  FF PS A        DV      +   + VDW +T +A+V KA+LPG+ K +V+V VE+  +++ISG+  ++ + +   W         F+RR  LPE+A   + +A + N V L + +PK P       + DIS  N
Sbjct:   27 FEGFFTPSSALANASTARDVA-----AFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGV-LTVVVPKAPEKKPQVKSIDISGAN 161          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 1
Query:  265 SHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            S   +   + VDW +T +A+V K +LPGV K +V+V VE+G ++ +SG+   +++ +   W         FVRR  LPEDA   + +A L N V L + +PK
Sbjct:   36 SETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGV-LTVTVPK 136          
BLAST of FC931577 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  211 FDPSDAFPLWEFESDVLLSHLQSTGQSS--------VDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 570
            FDP  +  LW+    V  S + +T  +         +DW +T +++V KA+LPGV K +V+V VE G ++ ISGQ  ++++ +   W         F+RR  LPE+A   + +A L N V L + +PK
Sbjct:   10 FDPF-SLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGV-LTVTVPK 135          
The following BLAST results are available for this feature:
BLAST of FC931577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
HS217_ARATH2.523e-6365.7321.7 kDa class VI heat shock protein OS=Arabidopsi... [more]
HS223_ORYSJ7.632e-4445.5022.3 kDa class VI heat shock protein OS=Oryza sati... [more]
HSP12_DAUCA4.085e-1338.0418.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_CHERU5.335e-1330.6018.3 kDa class I heat shock protein OS=Chenopodium... [more]
HSP11_DAUCA6.967e-1331.6717.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS17C_ARATH6.967e-1332.7917.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HS16C_ORYSJ1.552e-1234.3316.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS181_ARATH2.648e-1232.6218.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16A_WHEAT2.648e-1236.2716.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16A_ORYSJ3.458e-1233.5916.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC34106F09EF PostHarvP1 Citrus clementina cDNA clone C34106F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931577 ID=FC931577; Name=FC931577; organism=Citrus clementina; type=EST; length=703bp
GAAGGAAAATTTTTGCAATTTTCGGTCTTCTAGTCTGGAATGACTAGTTG
CATAAAGCTTGAAGTTCATACAGATGATCGCACTCCGCATAAATGGATTG
TTGCATTAGGCGAAGACGTGTTCAGAAGATTTCTCTCCCAGGGAAATCCC
GCTGTGCATAAGGCATTTGGCGATGGCTCTCTGTTCAGTCCATTGTTGTT
CGGAAAATTCTTTGATCCATCTGATGCCTTTCCTCTCTGGGAATTTGAGT
CAGATGTTTTGTTATCTCATCTTCAGAGCACTGGCCAGAGTTCTGTTGAT
TGGCTTCAGACAGACCAAGCTTATGTGCTAAAAGCAGAACTGCCGGGAGT
TGGGAAAAACCAAGTGCAAGTCTCTGTCGAAAATGGGAAGATTGTGGAAA
TTTCTGGGCAGTGGAAGGAGCAGAGAGATCCGAGGGCAAAGGACTGGAGA
AGTGGCCATTGGTGGGAACATGGATTTGTTCGGAGGCTTGAGCTGCCGGA
AGATGCAGACTGGAGGAAAACAGAAGCGTATTTGAGTAACGACGTGTTTC
TGGAAATCAGAATTCCCAAGAATCCTTCAACTTGTGATATTTCCCACGGA
AATGGTGCCGCGACAAAAAATTCTGAAGCAATGTAAGTTTGAGGAGGGTG
ATACATTCTGCTACTTGAAAAACAAATCTGACAAAAAAAAAAAAAAAAAA
AAA
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