FC931582

Overview
NameFC931582
Unique NameFC931582
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8398 contig Ccv1_Contig8398:82..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC931582 vs. ExPASy Swiss-Prot
Match: MINP1_MOUSE (Multiple inositol polyphosphate phosphatase 1 OS=Mus musculus GN=Minpp1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 3 
Query:  297 PSEIPDGCTPIHLNLVARHGTRAPTKKRMRELERLADHLEVLIREAKEKGSSLQKVPGWLQGWKSPWQGKLKGGELISKGEDELYDLGIRIREKYPDLFSEEYHPDVYPIKATQVPRASASAVAF 671
            P  +   CTP+ L  + RHGTR PT K++R+L++L   L+   RE+++ GS   +V   L  W   W G    G+L+ KG  ++  L +R+   +PDLFS E +  +  I +++  R   S+ AF
Sbjct:   71 PELLAGTCTPVQLVALIRHGTRYPTTKQIRKLKQLQGLLQT--RESRDGGS---QVAAALAEWPL-WYGDWMDGQLVEKGRQDMRQLALRLAALFPDLFSRENYDRLRLITSSK-HRCVDSSAAF 188
The following BLAST results are available for this feature:
BLAST of FC931582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MINP1_MOUSE3.475e-1134.40Multiple inositol polyphosphate phosphatase 1 OS=M... [more]
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Properties
Property NameValue
Genbank descriptionC34106G03EF PostHarvP1 Citrus clementina cDNA clone C34106G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931582 ID=FC931582; Name=FC931582; organism=Citrus clementina; type=EST; length=673bp
GGCTACCAAATCAATCGTCAATCAAATCCCCGATTGTATAAGCACTGTAG
TTACCGACACACCGAATCTTACTCGTTCGTGAGCGGAGCGTCTAAGCTGA
GAAATTATTTCATCATCAAAGCACAAAACCAGAGACGGTGAAAATGAAGA
AAGCTACGGCTTCTTTTATGTTGATCCTGTGCGTACTTTTGTTGACGCAT
CTAAACGACGCCGTTCAAAATTTCGACGTTCGACGGCACCTCTCGACTGT
CTCAAGATACGACTTCGTAAAAGACGTCGTTGATAAGAACTTTGTACCTT
CTGAAATTCCCGATGGATGTACTCCAATTCACTTAAATCTTGTGGCAAGG
CACGGGACTCGTGCACCCACGAAGAAACGGATGAGGGAGTTGGAAAGATT
GGCTGATCATTTGGAAGTACTTATAAGGGAAGCCAAAGAAAAGGGTTCGT
CTTTACAGAAAGTTCCGGGCTGGTTACAGGGATGGAAGTCTCCCTGGCAA
GGGAAACTGAAGGGTGGTGAATTGATTAGCAAAGGAGAAGATGAGTTATA
TGATCTCGGAATCAGGATTAGAGAAAAATATCCAGATTTGTTTAGCGAGG
AATATCACCCGGATGTCTATCCCATTAAGGCTACTCAGGTTCCTCGCGCA
TCTGCGAGTGCAGTAGCATTTGG
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