FC931598

Overview
NameFC931598
Unique NameFC931598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9410 contig Ccv1_Contig9410:539..1248. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 109/148 (73.65%), Postives = 126/148 (85.14%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKXDEG 687
            EYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIR +N  MLMDS LEG FS+DDGTEL+RLASRCLQYEPRERPN KSLV+++ PLQK+ E+ S+ L+G+P+   +T     L+PLGEAC R DLTAIHEI+EK+GYK DEG
Sbjct:  222 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIEKLGYKDDEG 365          

HSP 2 Score: 158.688 bits (400), Expect = 2.855e-38
Identity = 71/96 (73.96%), Postives = 84/96 (87.50%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAHALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNT*EQEGLSQKVLFT 289
            E EERLL+AEFMPNETL+KHLFHWE+QPMKWAMR+RVAL++A AL+YC+SKGRALYHDLN YR+LFD D NPRLSCFGLMKN+ + +  S  + FT
Sbjct:  124 EDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFT 219          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.571e-57
Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKXDEGI 690
            + + TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I  KN   LMD  L+G FS D+   + +LAS+CL+YE +E PN K +VA+L  LQ   E PSY ++ + +       +  L+PLGEAC R+DL +IH IL   GY  D+ I
Sbjct:  200 DQITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDI 348          

HSP 2 Score: 100.138 bits (248), Expect = 2.571e-57
Identity = 44/81 (54.32%), Postives = 65/81 (80.25%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAHALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 244
            +G++R LVA+FM N+TL+K LF  + Q M W++R+RVA ++A ALDYC++ G A Y++L+ Y++LFD+DG+  LSCFGLMK
Sbjct:  115 DGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMK 195          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.460e-50
Identity = 101/150 (67.33%), Postives = 119/150 (79.33%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGI--PHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKXDEG 687
            EYLR GRV PESV YSFGT+LLDLLSGKHIPPSHALD+IRGKN ++LMDS LEG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ +++VPSY ++GI       ST Q   L+PLGEACSR+DLTAIH+IL    Y+ DEG
Sbjct:  239 EYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQR-PLSPLGEACSRMDLTAIHQILVMTHYRDDEG 387          

HSP 2 Score: 150.599 bits (379), Expect = 7.776e-36
Identity = 65/96 (67.71%), Postives = 83/96 (86.46%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAHALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNT*EQEGLSQKVLFT 289
            +G+ERLLVAEFMPN+TL+KHLFHWENQ ++WAMR+RV  Y+A ALDYCS++GR LYHDLN YR+LFD+DG+PRLSCFGLMKN+ + +  S  + +T
Sbjct:  141 DGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYT 236          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.487e-21
Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAHALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 247
            E E RLLV EFMP  +L  HLF      QP+ W +R++VAL  A  L +  SS+ R +Y D  T  IL D + N +LS FGL K+
Sbjct:  143 EDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKD 227          

HSP 2 Score: 55.0694 bits (131), Expect = 6.487e-21
Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHI----PPSHALDLIR-GKNFLM-------LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 522
            EYL TG +  +S VYSFG +LL+LLSG+       PS   +L+   K +L+       ++D+ L+  +S ++  ++  L+ RCL  E + RPN   +V+ L  +Q
Sbjct:  250 EYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.859e-20
Identity = 43/143 (30.07%), Postives = 71/143 (49.65%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYT-------LMGIPHGTA-STKQTITLTPLG 612
            EY+ +G +   S VYSFG LLL++LSGK    H  P+   +L+          +  L+++D+ L+  +  ++   +  +A +CL +EP+ RP    +V +L  LQ     PS T        +G   GT  S+++  T  P G
Sbjct:  249 EYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQLQDNLGKPSQTNPVKDTKKLGFKTGTTKSSEKRFTQKPFG 391          

HSP 2 Score: 56.6102 bits (135), Expect = 1.859e-20
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWEN--QPMKWAMRVRVALYLAHALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKN 247
            E E RLLV EFM   +L  HLF      +P+ W +RV VAL  A  L +  S   + +Y D+    IL D D N +LS FGL ++
Sbjct:  142 EDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARD 226          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.140e-20
Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAHALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 244
            EGE RLLV EFMP  +L  HLF    QP+ WA+R++VA+  A  L +   +K + +Y D     IL D + N +LS FGL K
Sbjct:  158 EGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAK 239          

HSP 2 Score: 48.9062 bits (115), Expect = 3.140e-20
Identity = 30/105 (28.57%), Postives = 49/105 (46.67%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------------KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 522
            EY+ TGR+  +S VYSFG +LL+LLSG+       + + +             +    +MD+ L G +          LA +CL  + + RP    ++A L  L+
Sbjct:  263 EYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLE 367          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 1.717e-17
Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAHALDYCSSKGR-ALYHDLNTYRILFDQDGNPRLSCFGLMK 244
            E +E LLV EFMP  +L  HLF   N P  W +R+++ +  A  L +  S  R  +Y D     IL D + + +LS FGL K
Sbjct:  161 EDKELLLVYEFMPKGSLESHLFR-RNDPFPWDLRIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAK 241          

HSP 2 Score: 53.1434 bits (126), Expect = 1.717e-17
Identity = 35/132 (26.52%), Postives = 65/132 (49.24%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM---------------LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTI 594
            EY+ TG +  +S V++FG +LL++++G     +H     RG+  L+               +MD  ++G ++    TE+ R+   C++ +P+ RP+ K +V  L  +Q    VP+          +STKQ +
Sbjct:  265 EYMATGHLYVKSDVFAFGVVLLEIMTGL---TAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVPN---------RSSTKQAV 384          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 2.907e-17
Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFHWEN--QPMKWAMRVRVALYLAHALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 247
            E E RLLV EFM   +L  HLF      QP+ W  RVR+AL  A  L +  +++ + +Y D     IL D + N +LS FGL ++
Sbjct:  143 EEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARD 227          

HSP 2 Score: 52.7582 bits (125), Expect = 2.907e-17
Identity = 36/110 (32.73%), Postives = 56/110 (50.91%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKH-------IPPSHALD-----LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL--QKEA 531
            EYL TG +  +S VYSFG +LL+LLSG+        +   + +D     L   +  L +MD  L+G +S     ++  LA  C+  + + RP    +V ++  L  QKEA
Sbjct:  250 EYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEA 359          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 8.291e-17
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 2
Query:    5 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAHALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 244
            G ERLLV E+M N +L  HLF   +  + W  R+ + L  A  L Y     + +Y D  +  +L D    P+LS FGL +
Sbjct:  163 GIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDL-KVIYRDFKSSNVLLDDQFCPKLSDFGLAR 241          

HSP 2 Score: 53.9138 bits (128), Expect = 8.291e-17
Identity = 35/128 (27.34%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSG-------KHIPPSHALDLIR-----GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQT 591
            EY++TG +  +S VYSFG +L ++++G       K +     LD ++      + F M++D  L  ++       L +LA  CL+   +ERP  + +V  L  + +E++   Y     P  T +TK++
Sbjct:  265 EYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKIIEESDSEDY-----PMATTTTKES 387          
BLAST of FC931598 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.067e-16
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 1
Query:  244 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------------LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 540
            EYL  G+   +S VYSFG L+L+++SGK     H  D   GKN              L L+DS LE ++ +++    + +A  C+Q +P +RPN  +++  LT       VP
Sbjct:  493 EYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDE-SGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSITLPVP 603          

HSP 2 Score: 50.0618 bits (118), Expect = 1.067e-16
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 2
Query:    2 EGEERLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAHALDYC--SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 244
            EGEE++LV EF+PN++L + LF   +   + WA R ++ +  A  + Y    S  + ++ DL    IL D +  P+++ FG+ +
Sbjct:  386 EGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMAR 469          
The following BLAST results are available for this feature:
BLAST of FC931598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
Y5126_ARATH1.610e-5773.65Probable serine/threonine-protein kinase At5g41260... [more]
SSP_ARATH2.571e-5747.65Probable inactive receptor-like kinase SSP OS=Arab... [more]
Y4523_ARATH1.460e-5067.33Probable serine/threonine-protein kinase At4g35230... [more]
APK1A_ARATH6.487e-2145.88Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH1.859e-2030.07Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2B_ARATH3.140e-2045.12Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CX32_ARATH1.717e-1739.02Probable serine/threonine-protein kinase Cx32, chl... [more]
NAK_ARATH2.907e-1740.00Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y5707_ARATH8.291e-1736.25Probable receptor-like protein kinase At5g47070 OS... [more]
CRK33_ARATH1.067e-1633.04Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC34106H09EF PostHarvP1 Citrus clementina cDNA clone C34106H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931598 ID=FC931598; Name=FC931598; organism=Citrus clementina; type=EST; length=710bp
TGAAGGCGAGGAGAGATTGCTTGTGGCCGAGTTTATGCCAAATGAGACTC
TCTCTAAACATCTTTTCCATTGGGAAAACCAACCCATGAAATGGGCAATG
AGGGTGAGAGTGGCTCTGTATCTCGCACACGCTCTGGATTATTGCAGCAG
TAAAGGGAGGGCATTATATCATGACCTTAATACTTATAGGATTTTATTTG
ATCAGGATGGTAATCCCAGGCTCTCCTGCTTTGGCCTTATGAAGAATACT
TGAGAACAGGAAGGGTTATCCCAGAAAGTGTTGTTTACAGCTTTGGCACC
CTGTTGCTTGATCTTCTCAGTGGCAAACACATACCCCCAAGTCATGCTCT
TGACCTCATACGTGGGAAAAATTTTCTGATGTTGATGGACTCATGTTTGG
AGGGTCATTTCTCAAATGATGATGGAACTGAACTAGTTCGGTTAGCTTCA
CGATGTTTACAGTATGAACCCCGTGAAAGGCCAAATGCAAAGTCTCTTGT
AGCTTCTCTCACTCCTCTTCAGAAGGAAGCTGAGGTTCCATCGTACACTT
TGATGGGTATTCCGCATGGAACTGCATCCACCAAGCAAACGATTACACTT
ACTCCTCTGGGTGAAGCTTGTTCGAGACTTGACCTTACTGCAATTCATGA
AATATTGGAGAAGGTTGGATACAAGNATGATGAGGGAATTGCAATGAGCT
TTCTTTCCAA
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