FC931606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 1.760e-96 Identity = 170/206 (82.52%), Postives = 186/206 (90.29%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDEPI 710 S+IA+KTWELEN+I+++++P S SD IF+YD+ +QT+FQQEKPW NDPHYFKRVKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAYEYMV+YSQTNK AGRLEN VGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTRTVSAGKVEIGAFRTY +GY PPDEP+ Sbjct: 6 STIARKTWELENSILTVDSPD-------STSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGYKPPDEPV 204
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2) HSP 1 Score: 337.806 bits (865), Expect = 3.434e-92 Identity = 166/206 (80.58%), Postives = 185/206 (89.81%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDEPI 710 S+IA+KTWELENNI+ +E PT+S ASD+IF YD+ +Q K QQEKPW +DP+YFKRV ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAYEYMV+YSQT+K AGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG+ D+ + Sbjct: 6 SAIARKTWELENNILPVE--PTDS-----ASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHV 204
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.553e-79 Identity = 141/204 (69.12%), Postives = 162/204 (79.41%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 SS+AQKTWEL NN+ +++ D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GY PPDE Sbjct: 6 SSVAQKTWELSNNMQEVQS-----------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDE 198
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.553e-79 Identity = 141/204 (69.12%), Postives = 162/204 (79.41%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 SS+AQKTWEL NN+ +++ D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GY PPDE Sbjct: 4 SSVAQKTWELSNNMQEVQS-----------IDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDE 196
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3) HSP 1 Score: 292.738 bits (748), Expect = 1.267e-78 Identity = 141/204 (69.12%), Postives = 160/204 (78.43%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GY PPDE Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDE 198
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4) HSP 1 Score: 292.738 bits (748), Expect = 1.267e-78 Identity = 141/204 (69.12%), Postives = 160/204 (78.43%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GY PPDE Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDE 198
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.161e-78 Identity = 141/204 (69.12%), Postives = 160/204 (78.43%), Query Frame = 3 Query: 93 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 SSIA KTWEL +NS + + D I+ YD+ Q + KPW D HYFK K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +GAFRTYP+GY PPDE Sbjct: 4 SSIAMKTWEL-----------SNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDE 196
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 8.212e-78 Identity = 140/206 (67.96%), Postives = 162/206 (78.64%), Query Frame = 3 Query: 87 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 MDS AQKTWELENNI ++ + D IF YD Q + KPW DPH+FK +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA AYEYM Y + K+ GR+E+AVGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP RTVSAGKV +GAFRTYP+GY PP+E Sbjct: 1 MDSDAAQKTWELENNIQTLPS-----------CDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNE 195
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.815e-75 Identity = 133/201 (66.17%), Postives = 159/201 (79.10%), Query Frame = 3 Query: 102 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 A KT+ELENNI +++ D +F YD +F Q KPW DPHYFK VKISA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYMV+Y + KQ GRLENA+GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVSAGKVEIGAFRTYP+GY PP+E Sbjct: 9 ALKTFELENNIQTID------------HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTYPQGYKPPNE 197
BLAST of FC931606 vs. ExPASy Swiss-Prot
Match: CSN5_CAEEL (COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans GN=csn-5 PE=1 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 5.156e-72 Identity = 126/208 (60.58%), Postives = 156/208 (75.00%), Query Frame = 3 Query: 81 VSMDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYXPPDE 704 V SS+ Q+ WE ENN+ ++ D+IF Y+ Q + + KPW DPHYFK++KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AYEYM YS+ GR E VGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP RT+SAGKV+IGAFRTYPEGY PPD+ Sbjct: 6 VKPSSSVPQRNWEKENNVQNV--------------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEGYRPPDD 199 The following BLAST results are available for this feature:
BLAST of FC931606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931606 ID=FC931606; Name=FC931606; organism=Citrus clementina; type=EST; length=712bpback to top |