FC931610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 58/120 (48.33%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 345 EVSTSMSCKRDRSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSE 704 E S + K E+ + R EIE SPSR DGID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF R+SHA +DR K EETPRPL DV+ S E Sbjct: 13 ESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYE 132
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24 Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 408 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSE 704 + SR EIE SPSR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRF++R+SHA +DR K EETPRPL DV+ S E Sbjct: 37 YFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYE 135
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24 Identity = 61/110 (55.45%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 381 SKLEDDE--PVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSE 704 S L DDE P F SR+EIER SPSR+DGID ET LR SYC F++ LG RL++PQ TI TA+ CHRFF+R+SHA +DR K EETP L DV+ AS E Sbjct: 21 SNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYE 130
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24 Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 345 EVSTSMSCKRDRSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSE 704 E S + K ++ + R EIE SPSR D ID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF+R+SHA +DR K EETPRPL DV+ S E Sbjct: 13 ESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYE 132
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23 Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 408 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSE 704 + SR EIE S SR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRFF+R+SHA +DR K EETPRPL DV+ S E Sbjct: 38 YFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYE 136
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT13_ARATH (Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.897e-21 Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 408 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSE 704 + SR+EIERFSPSRKDGID ++E+ LR SYC F+Q LG++L + Q TI AMV+CHRF++R+SHA +D K+E+ P L+ V+ AS E Sbjct: 35 YFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYE 133
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT11_ORYSJ (Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 3 Query: 408 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSET 707 +++RDE+ER SPSR+DG+ A +E LR +YC+FI+++GLRL+LPQ TI TA +LCHRF++R+SHA ++ K E+TP PL V+ + ET Sbjct: 10 YVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYLRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYET 109
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT12_ORYSJ (Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18 Identity = 43/100 (43.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 408 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRASSET 707 + +R+E+E+FSPSRKDGI + E+ +R YC+FI+++G+RL+LPQ TI TA++ CHRF++ +S A + K E+TP PL+ V+R + T Sbjct: 19 YFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGT 118
BLAST of FC931610 vs. ExPASy Swiss-Prot
Match: CCT11_ARATH (Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 408 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRXXXXXXXXXXXXKSEETPRPLNDVLRAS 698 + +R+ IE+ SPSR DGI+ ET R+SY +F+Q LG RL PQ TI TA+VLC RFF R+S +D K E +PRP DV+ S Sbjct: 8 YNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVS 104 The following BLAST results are available for this feature:
BLAST of FC931610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931610 ID=FC931610; Name=FC931610; organism=Citrus clementina; type=EST; length=723bpback to top |