FC931624

Overview
NameFC931624
Unique NameFC931624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931624 vs. ExPASy Swiss-Prot
Match: SUF_DROME (Protein suppressor of forked OS=Drosophila melanogaster GN=su(f) PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 64/216 (29.63%), Postives = 93/216 (43.06%), Query Frame = 2 
Query:    2 PEESIEVWKRFTQFEQMYGDLDSTLKVEQRRKEALSRTGE-EGASALEDSLQDVVSRYSFMDLWPCSSKDLDHLVRQEWLVKNINKKVDKSALSNGPGIVDKGPSGLTSNSTTSATVIYPDTSQMVIYDPR--QKPGIXXXXXXXXXXXXXXXXXXXXXXVATGGGGIMNPFDEMLKAASPAIFAFLANLP---AVEGPTPNVDIVLSICLQSDIP 631
            P +S+EVW RF +FE   GDL S +KVE+RR        E EG    +     +V RY F+DL+PC+S +L  +   E  V  I  KV   A S   G V+       ++S  +  +  PD SQM+ + PR    PG                           GG    P         PA+ A  A LP   +  GP  +V+++  I ++ ++P
Sbjct:  511 PHKSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFENLKEYEGKETAQ-----LVDRYKFLDLYPCTSTELKSIGYAE-NVGIILNKVGGGAQSQNTGEVE-------TDSEATPPLPRPDFSQMIPFKPRPCAHPGAH----------------------PLAGGVFPQP---------PALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLP 682
The following BLAST results are available for this feature:
BLAST of FC931624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUF_DROME4.683e-1229.63Protein suppressor of forked OS=Drosophila melanog... [more]
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Properties
Property NameValue
Genbank descriptionC34107C02EF PostHarvP1 Citrus clementina cDNA clone C34107C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931624 ID=FC931624; Name=FC931624; organism=Citrus clementina; type=EST; length=723bp
ACCTGAGGAATCCATTGAGGTATGGAAAAGGTTCACCCAATTTGAGCAAA
TGTATGGAGATTTGGATAGCACGCTGAAGGTTGAACAAAGAAGGAAAGAA
GCTCTTTCTAGAACTGGTGAAGAAGGAGCATCTGCACTAGAGGATTCATT
GCAAGATGTTGTGTCCCGTTATAGTTTCATGGATCTTTGGCCCTGCTCCT
CTAAGGACCTGGATCATTTGGTCCGACAAGAGTGGCTTGTCAAAAACATC
AACAAGAAAGTTGATAAATCAGCTCTCTCTAATGGACCTGGGATTGTAGA
TAAGGGTCCTTCTGGCCTGACAAGCAATTCAACTACATCTGCAACAGTCA
TATACCCAGATACATCTCAGATGGTTATTTATGATCCAAGGCAAAAACCT
GGCATTGGAATTTCTCCTAGCACAACAGCAACTGGAGCCTCTTCTGCACT
TAACGCCTTGTCTAATCCCATTGTTGCAACAGGGGGTGGTGGAATAATGA
ACCCGTTTGACGAGATGTTGAAAGCAGCATCACCTGCAATATTTGCATTT
TTAGCAAACTTGCCTGCTGTGGAAGGTCCAACACCAAATGTGGATATCGT
ATTATCAATTTGTTTGCAGAGTGACATACCGACGGGACAGATGGGGAAAT
CACCGACGACTTACCCAACTCCAAATACCACAGGCGCTGCTCGTAGTGCA
AGCGGCATTTCTGGGTCAAACAA
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