FC931625

Overview
NameFC931625
Unique NameFC931625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931625 vs. ExPASy Swiss-Prot
Match: BCAL3_ARATH (Branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=At5g57850 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.908e-24
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 1 
Query:  451 ERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRII 663
            ER+K  +  Q    QFLAMYSS+  GITTDPAAMV+P+DDHMVHRGHGVFDTA I +GYLYELDQHLDRI+
Sbjct:   64 ERLKLARGGQ----QFLAMYSSVVDGITTDPAAMVLPLDDHMVHRGHGVFDTALIINGYLYELDQHLDRIL 130

HSP 2 Score: 23.0978 bits (48), Expect = 6.908e-24
Identity = 20/53 (37.74%), Postives = 26/53 (49.06%), Query Frame = 2 
Query:  203 NLPVFSRNLCYSRTGSFGEMRFIRSCGRTEALI---DSSAQLSDVPLLSCSEV 352
            NL   S+  C  R G     RF R   R   ++   DSS+Q  +VP+LS  EV
Sbjct:   14 NLRSLSQVPCPLRHG----FRFPRRLTRRRTILMCSDSSSQSWNVPVLSSYEV 62
The following BLAST results are available for this feature:
BLAST of FC931625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BCAL3_ARATH6.908e-2473.24Branched-chain-amino-acid aminotransferase-like pr... [more]
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Properties
Property NameValue
Genbank descriptionC34107C03EF PostHarvP1 Citrus clementina cDNA clone C34107C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931625 ID=FC931625; Name=FC931625; organism=Citrus clementina; type=EST; length=700bp
GTTTTTTAATTTCGGAATCTTTCGAGTCACTACATTATTATGGATAACAC
AAAATATACAATTTAACATGACTCATAGAACGATTGCTTGAATCTTCATC
TATCTCAGCGTTCTTCTTTCAGCTCCCGATCCCATGGCTTCTCTCGCAAA
AACCATCTCTCAAAACCAACCTGTTCCCACTAAACTCACTCATCATGTCA
ATAACTTGCCTGTATTTTCTCGAAATCTTTGCTATTCAAGAACTGGGTCG
TTCGGAGAAATGAGATTCATTAGAAGTTGTGGCCGAACTGAAGCATTGAT
TGATTCAAGTGCTCAATTATCTGATGTTCCACTTCTATCTTGCTCAGAGG
TTTATTTTCTTTTTGAATAGTCAATTTTGTATGCTTTAATTAGTGCTCTA
TATGTAAGTGCTTCTGAAGTGCCGCTATATGTATGTTTGTTAAGGCCATT
GAAAGAATAAAGTCAACCCAAGCAAACCAGAAAAGCAAGCAGCAATTTTT
AGCCATGTACTCGAGCATTTTTGGAGGAATAACAACAGATCCAGCTGCTA
TGGTGATTCCTATGGACGATCATATGGTCCACAGAGGGCATGGTGTTTTT
GATACTGCTGCAATATGTGATGGATACCTCTATGAATTAGACCAACACCT
TGATCGTATTATAGGTCAGCATCCATGGCCAAATTCAACTTCCTTTTGAT
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