FC931628

Overview
NameFC931628
Unique NameFC931628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931628 vs. ExPASy Swiss-Prot
Match: MFAP1_CHICK (Microfibrillar-associated protein 1 OS=Gallus gallus GN=MFAP1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.550e-35
Identity = 90/213 (42.25%), Postives = 115/213 (53.99%), Query Frame = 3
Query:   90 LKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXVETKKILVEEVRKDEEIQKNLEMEANIADVDTDDEVNEAEGYEAWKVREIARIKRDRXXXXXXXXXXXXXXXVRNMTXXXXXXXXXXNPKLAPPP--KQKWRFMQKYYHKGAFFQSXXXXXXXXVRTDEIYHRDFSAPTGEDKMDKTILPKVMQVKHFGRSGRTKWTHLCHEDT 722
            LKPVF+ K +R T+                           T KI+ EE +K  E+++N    A +  +DTDDE N+ E YEAWKVRE+ RIKRDR               +RN+T          N K+      K K++F+QKYYH+GAFF             +E+Y RDFSAPT ED  +KTILPKVMQVK+FGRSGRTK+THL  +DT
Sbjct:  202 LKPVFIRKKDRITVQEREAEALKQKELEQEAKRLAEERRKYTLKIVEEEAKK--ELEENKRSLAALDALDTDDE-NDEEEYEAWKVRELKRIKRDREEREAMEKEKAEIERMRNLTEEERRAELRANGKVVTNKAVKGKYKFLQKYYHRGAFFMD---------EDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDT 402          
BLAST of FC931628 vs. ExPASy Swiss-Prot
Match: MFAP1_HUMAN (Microfibrillar-associated protein 1 OS=Homo sapiens GN=MFAP1 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.754e-34
Identity = 89/213 (41.78%), Postives = 115/213 (53.99%), Query Frame = 3
Query:   90 LKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXVETKKILVEEVRKDEEIQKNLEMEANIADVDTDDEVNEAEGYEAWKVREIARIKRDRXXXXXXXXXXXXXXXVRNMTXXXXXXXXXXNPKLAPPP--KQKWRFMQKYYHKGAFFQSXXXXXXXXVRTDEIYHRDFSAPTGEDKMDKTILPKVMQVKHFGRSGRTKWTHLCHEDT 722
            LKPVF+ K +R T+                           T KI+ EE +K  E+++N    A +  ++TDDE N+ E YEAWKVRE+ RIKRDR               +RN+T          N K+      K K++F+QKYYH+GAFF             +E+Y RDFSAPT ED  +KTILPKVMQVK+FGRSGRTK+THL  +DT
Sbjct:  199 LKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKK--ELEENKRSLAALDALNTDDE-NDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMD---------EDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDT 399          
BLAST of FC931628 vs. ExPASy Swiss-Prot
Match: MFAP1_BOVIN (Microfibrillar-associated protein 1 OS=Bos taurus GN=MFAP1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.754e-34
Identity = 89/213 (41.78%), Postives = 115/213 (53.99%), Query Frame = 3
Query:   90 LKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXVETKKILVEEVRKDEEIQKNLEMEANIADVDTDDEVNEAEGYEAWKVREIARIKRDRXXXXXXXXXXXXXXXVRNMTXXXXXXXXXXNPKLAPPP--KQKWRFMQKYYHKGAFFQSXXXXXXXXVRTDEIYHRDFSAPTGEDKMDKTILPKVMQVKHFGRSGRTKWTHLCHEDT 722
            LKPVF+ K +R T+                           T KI+ EE +K  E+++N    A +  ++TDDE N+ E YEAWKVRE+ RIKRDR               +RN+T          N K+      K K++F+QKYYH+GAFF             +E+Y RDFSAPT ED  +KTILPKVMQVK+FGRSGRTK+THL  +DT
Sbjct:  199 LKPVFIRKKDRVTVQEREAEALKQKELEQEAKHMAEERRKYTLKIVEEETKK--ELEENKRSLAALDALNTDDE-NDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMD---------EDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDT 399          
BLAST of FC931628 vs. ExPASy Swiss-Prot
Match: MFAP1_MOUSE (Microfibrillar-associated protein 1 OS=Mus musculus GN=Mfap1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 88/213 (41.31%), Postives = 115/213 (53.99%), Query Frame = 3
Query:   90 LKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXVETKKILVEEVRKDEEIQKNLEMEANIADVDTDDEVNEAEGYEAWKVREIARIKRDRXXXXXXXXXXXXXXXVRNMTXXXXXXXXXXNPKLAPPP--KQKWRFMQKYYHKGAFFQSXXXXXXXXVRTDEIYHRDFSAPTGEDKMDKTILPKVMQVKHFGRSGRTKWTHLCHEDT 722
            LKPVF+ K +R T+                           T KI+ EE +K  E+++N    A +  ++TDDE N+ E YEAWKVRE+ RIKR+R               +RN+T          N K+      K K++F+QKYYH+GAFF             +E+Y RDFSAPT ED  +KTILPKVMQVK+FGRSGRTK+THL  +DT
Sbjct:  199 LKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKK--ELEENKRSLAALDALNTDDE-NDEEEYEAWKVRELKRIKREREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMD---------EDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDT 399          
BLAST of FC931628 vs. ExPASy Swiss-Prot
Match: MFAP1_DICDI (Protein MFAP1 homolog OS=Dictyostelium discoideum GN=mfap1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.733e-20
Identity = 63/214 (29.44%), Postives = 100/214 (46.73%), Query Frame = 3
Query:   87 MLKPVFVPKSERDTIXXXXXXXXXXXXXXXXXXXXXXXXXVETKKILVEEVRKDEEIQKNLEMEANIADVDTDDEVNEAEGYEAWKVREIARIKRDRXXXXXXXXXXXXXXXVRNMTXXXXXXXXXXNPK--LAPPPKQKWRFMQKYYHKGAFFQSXXXXXXXXVRTDEIYHRDFSAPTGEDKMDKTILPKVMQVKHFGRSGRTKWTHLCHEDT 722
            + +P F+ K +R TI                         +E  + L +E+ +D + Q+  E+E    +   DDE  +      W  RE+ R++ +                 R MT            +  +    K++ +F+Q+ YH+GAFFQ            + I ++DFSAPTGEDK ++ +LPKVMQVK+FG++GRTK+THL  +DT
Sbjct:  213 IFRPTFIKKDDRGTIKTDEQWEKEEQEQQAQLEREKEQRKIEAHRKLKDELDRDRKEQEAKELEQKEEEEYDDDEDQDGSKKLLWIQRELERVRLEIHTRLLAEFEKKEFARRRAMTDDQILKEDPSRSRTNIDNSQKKQLKFLQRDYHRGAFFQDD----------EYIKNKDFSAPTGEDKFNRELLPKVMQVKNFGKAGRTKYTHLKDQDT 416          
BLAST of FC931628 vs. ExPASy Swiss-Prot
Match: YLK3_SCHPO (Uncharacterized protein C1782.03 OS=Schizosaccharomyces pombe GN=SPAC1782.03 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.794e-17
Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 3
Query:  207 VETKKILVEEVRKDEEIQKNLEMEANIADVDTDDEVNEAEGYEAWKVREIARIKRDRXXXXXXXXXXXXXXXVRNMTXXXXXXXXXXNPKLAPPPKQK--WRFMQKYYHKGAFFQSXXXXXXXXVRTDEIYHRDFSAPTGEDKMDKTILPKVMQVKH--FGRSGRTKWTHLCHEDT 722
            V ++KIL E ++++  +++       + D+D  D ++    YE WK+R + R KRD+                R M           + + +   K+K   +F+QKYYHKGAF+Q+           D +  RD+S  T  + ++K +LPK MQ++   F ++G+T+WTHL +EDT
Sbjct:  153 VTSQKILEETIKRELLLKETKNNNELLNDIDDTDGIDPQSEYELWKLRHLLRKKRDKEKSLELEREKMAIEERRLMNSEEREAQDLKDAEASRRGKKKSSMQFLQKYYHKGAFYQN----------EDIVSKRDYSEATEGEVLNKDLLPKPMQIRGDLFAKAGQTRWTHLANEDT 318          
The following BLAST results are available for this feature:
BLAST of FC931628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MFAP1_CHICK5.550e-3542.25Microfibrillar-associated protein 1 OS=Gallus gall... [more]
MFAP1_HUMAN2.754e-3441.78Microfibrillar-associated protein 1 OS=Homo sapien... [more]
MFAP1_BOVIN2.754e-3441.78Microfibrillar-associated protein 1 OS=Bos taurus ... [more]
MFAP1_MOUSE8.014e-3441.31Microfibrillar-associated protein 1 OS=Mus musculu... [more]
MFAP1_DICDI1.733e-2029.44Protein MFAP1 homolog OS=Dictyostelium discoideum ... [more]
YLK3_SCHPO1.794e-1730.11Uncharacterized protein C1782.03 OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionC34107C06EF PostHarvP1 Citrus clementina cDNA clone C34107C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931628 ID=FC931628; Name=FC931628; organism=Citrus clementina; type=EST; length=753bp
AGGAAGAGGAGGAGGCAGTAGAAGAAGAGGAGGAAGAGGAATCTGAGTAT
GAGACTGACTCAGAAGAAGAACAAATGGGTATTGCAATGTTGAAGCCTGT
GTTTGTGCCAAAGTCGGAAAGAGATACCATAGCGGAGCGTGAGCGGCTTG
AGGCTGAAGAACAGGCACTCGAAGAATTGGCCAAGAGGAAATTGGAGGAG
AGGAAAGTGGAAACAAAGAAGATACTGGTTGAGGAGGTCCGCAAAGATGA
AGAAATTCAGAAGAATTTGGAAATGGAAGCTAATATTGCTGATGTTGATA
CTGATGATGAAGTTAATGAGGCAGAGGGGTATGAGGCTTGGAAGGTGAGA
GAGATTGCGAGGATCAAGAGGGACCGGGAGGCCAAGGAGGCAATGTTGAA
GGAGAAAGAAGAAATTGAGAAGGTGAGAAACATGACAGAGGAAGAGAGAA
GGGAGTGGGAGAGAAGGAACCCGAAACTTGCTCCACCACCAAAGCAGAAG
TGGAGGTTTATGCAGAAATATTACCACAAGGGTGCTTTCTTTCAATCAGA
TGCAGCTGATACTGCTGCAACTGTTAGAACTGACGAGATTTACCACCGCG
ATTTCTCTGCCCCCACTGGAGAAGATAAGATGGACAAGACCATATTGCCC
AAGGTCATGCAGGTCAAGCACTTTGGTCGTAGCGGGAGGACCAAATGGAC
CCATCTTTGTCATGAGGATACACTGATTGGAAACATCCGTGGACGTACAT
GAT
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