FC931634

Overview
NameFC931634
Unique NameFC931634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  304 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLPCLV 564
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG L  G+ P L+
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRG-LAKGWAPTLI 123          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  304 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLPCLV 564
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG L  G+ P L+
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRG-LAKGWAPTLI 122          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 47/80 (58.75%), Postives = 54/80 (67.50%), Query Frame = 1
Query:  316 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLP 555
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG L  G+ P
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRG-LAKGWAP 124          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 45/86 (52.33%), Postives = 55/86 (63.95%), Query Frame = 1
Query:  307 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLPCLV 564
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG L  G+ P  +
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRG-LAKGWAPTFI 128          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17
Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = 1
Query:  307 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLP 555
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG L  G+ P
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRG-LAKGWAP 125          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.251e-17
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  334 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQG 522
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEG 68          

HSP 2 Score: 32.3426 bits (72), Expect = 2.251e-17
Identity = 21/60 (35.00%), Postives = 26/60 (43.33%), Query Frame = 3
Query:  540 GWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADXALC 719
            G+  T +GYS QGA             S    P         +YL  SA+AEF+AD  LC
Sbjct:   75 GFGATFVGYSLQGAGKYGGYEYFKHLYSSWLSPGVT------VYLMASATAEFLADIMLC 128          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 1
Query:  322 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLPCLV 564
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R  L  G+ P L+
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARA-LVKGWAPTLL 106          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 5.243e-16
Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query:  358 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFL 537
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G L
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLL 65          

HSP 2 Score: 46.595 bits (109), Expect = 5.243e-16
Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 3
Query:  519 GNQGLLRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADXALC 719
            G  GLL+G  PT +GY+ QG              +D  G E A +++  I+LA SA+AE IAD ALC
Sbjct:   60 GPSGLLQGLGPTAVGYALQGFLKFGFYEVFKKTYADAVG-EKADQFRIPIWLAASATAEVIADIALC 125          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  349 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLPCLV 564
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG L  G+ P  +
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRG-LAKGWAPTFI 112          
BLAST of FC931634 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query:  328 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFLGDGYLPCLV 564
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG L  G +P L+
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRG-LYTGGMPTLI 86          
The following BLAST results are available for this feature:
BLAST of FC931634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MPCP_MOUSE1.041e-1955.17Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT1.359e-1955.17Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_PONAB5.166e-1958.75Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_BOVIN5.711e-1852.33Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_HUMAN1.272e-1753.01Phosphate carrier protein, mitochondrial OS=Homo s... [more]
PIC2_YEAST2.251e-1749.21Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MPCP_CAEEL4.835e-1749.38Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MCFN_DICDI5.243e-1643.33Mitochondrial substrate carrier family protein N O... [more]
MPCP_CHOFU6.981e-1652.78Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO3.465e-1545.00Probable mitochondrial phosphate carrier protein O... [more]
back to top
Properties
Property NameValue
Genbank descriptionC34107D01EF PostHarvP1 Citrus clementina cDNA clone C34107D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931634 ID=FC931634; Name=FC931634; organism=Citrus clementina; type=EST; length=720bp
GAATAAAAGCGGAATTGCTTTGCCCGGGTTCTAACAAATTGGAAGCGAGA
GACAGGAGGAGGAGAAGAGAAAGAGAAAATTAGAAGAATTCTCTCTGTCT
CGCTCTTTTTCTCTATAATTCAATCAAGCTTTTTACTCTCAAAATCAAAT
TTCAAAAATTCCGAAATGGCCCTCACAGAATCTTATAGGAAAAACTCTCT
GATACCAAGCTACCTCTACTCCTCCCAAACATCCTTCCCGTCCACGGCGG
CTTTCAATGGAGCGGCAGCAGCCGCCACGTCGCCGGCTACTCCATCCACG
GCGAGGAGGAGCTTCGTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGA
GATGTACTCCCCTGCATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCA
GCTGCGGTCTCACTCACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGC
AATATGCAGATTGATCCTGTTAAGTATAAAAGCATATCATCTGGTTTTGG
AGTTTTGCTCAAGGAACAGGGAATCAGGGGCTTCTTAGGGGATGGGTACC
TACCTTGCTTGGTTACAGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACG
AGTTCTTCAAGAAGTACTACTCTGACATTGCTGGTCCAGAGTATGCTGCT
AAGTACAAGACTTTAATCTACCTTGCTGGCTCTGCTTCTGCTGAGTTCAT
TGCTGATGNTGCTCTTTGCC
back to top