FC931646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: NCKX6_RAT (Sodium/potassium/calcium exchanger 6 OS=Rattus norvegicus GN=Slc24a6 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24 Identity = 62/192 (32.29%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 86 KISKAWEFPVTTILKLTIPETDP----LEWNRFYSSANIILCPLLLLYACSSFLPFDHPIAFLLPNTHFPLWFIVXXXXXXXXXXXXIV--ETEAPKTEQMPVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQ 643 K+ K + PV +L LT+P DP W R + +++ PL+L+ S + + I LLP +W +V +E P+ + + F+ S WI+ A E++N L ++G + L + +LGLT+LAWGNS+GD +D +A+ G+P MA + CF G +FN+LVG+G ++Q Sbjct: 325 KLLKVAKLPVEFLLLLTVPVVDPDKDDRNWKRPLNCLQLVISPLVLVLTLQSGVYGIYEIGGLLP-----VWAVVVIVGTALASVTFFATSNSEPPRLHWL-FAFLGFLTSALWINAAATEVVNILRSLGVVFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFSACFGGIIFNILVGVGLGCLLQ 510
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: CCX4_ARATH (Cation/calcium exchanger 4 OS=Arabidopsis thaliana GN=CCX4 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24 Identity = 67/195 (34.36%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 71 AQVCGKISKAWEFPVTTILKLTIPETDPLEWNRFYSSANIILCPLLLLYACSSFLPFDHPIAFLLPNTHFPLWFIVXXXXXXXXXXXXIVETEAPKTEQM---PVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPA--MAMAGCFAGPMFNMLVGLGSALVM 640 + +C KI+ E P+T +LTIP + W++ Y+ A++ L P+LL + SS D + + + + + TE + Q+ P V+ F+MS+ W +A EL+ L G I + +ILGLTVLAWGNS+GDLV+++A++ G +A++GC+AGPMFN LVGLG ++ + Sbjct: 384 SSLCSKITSLLETPLTVPRRLTIPLIEEDSWSKTYAVASVSLAPVLLSFLWSS--QDDTSLQARI------VAYFIGIAIGSTLGYLAFKNTEPDRPPQIYLIPWVLGGFIMSIVWFYMIANELVALLVTFGGIYGINPSILGLTVLAWGNSMGDLVSNIALSMNGGDGVQIALSGCYAGPMFNTLVGLGMSMFL 570
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: NCKX6_MOUSE (Sodium/potassium/calcium exchanger 6 OS=Mus musculus GN=Slc24a6 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 62/192 (32.29%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 86 KISKAWEFPVTTILKLTIPETDP----LEWNRFYSSANIILCPLLLLYACSSFLPFDHPIAFLLPNTHFPLWFIVXXXXXXXXXXXXIVET--EAPKTEQMPVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQ 643 ++ K + PV +L LT+P DP W R + +++ PL+L+ S + + I LLP +W +V + E P+ + + F+ S WI+ A E++N L ++G I L + +LGLT+LAWGNS+GD +D +A+ G+P MA + CF G +FN+LVG+G ++Q Sbjct: 325 RVLKVVKLPVEFLLLLTVPVVDPDKDDRNWKRPLNCLQLVISPLVLVLTLQSGVYGIYEIGGLLP-----VWAVVVIVGTALASVTFFATSNREPPRLHWL-FAFLGFLTSALWINAAATEVVNILRSLGVIFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFSACFGGIIFNILVGVGLGCLLQ 510
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: NCKX6_HUMAN (Sodium/potassium/calcium exchanger 6 OS=Homo sapiens GN=SLC24A6 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 59/191 (30.89%), Postives = 100/191 (52.36%), Query Frame = 2 Query: 86 KISKAWEFPVTTILKLTIPETDP----LEWNRFYSSANIILCPLLLLYACSSFLPFDHPIAFLLPNTHFPLWFIVXXXXXXXXXXXXIVETEA-PKTEQMPVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQ 643 K K ++ PV +L LT+P DP W R + ++++ PL+++ S + I L+P +W +V +++ P + F+ S WI+ A E++N L ++G + L + +LGLT+LAWGNS+GD +D +A+ G+P MA + CF G +FN+LVG+G ++Q Sbjct: 325 KALKVFKLPVEFLLLLTVPVVDPDKDDQNWKRPLNCLHLVISPLVVVLTLQSGTYGVYEIGGLVP-----VWVVVVIAGTALASVTFFATSDSQPPRLHWLFAFLGFLTSALWINAAATEVVNILRSLGVVFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFSACFGGIIFNILVGVGLGCLLQ 510
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: CCX3_ARATH (Cation/calcium exchanger 3 OS=Arabidopsis thaliana GN=CCX3 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 63/188 (33.51%), Postives = 99/188 (52.66%), Query Frame = 2 Query: 80 CGKISKAWEFPVTTILKLTIPETDPLEWNRFYSSANIILCPLLLLYACSSFLPFDHPIAFLLPNTHFPLWFIVXXXXXXXXXXXXIVETEAPKTEQMPVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPA--MAMAGCFAGPMFNMLVGLGSALV 637 C K + E P+T +LTIP + W++ Y+ A++ L P+LL SS ++ + + +V P+ +P V+ F+MS+ W +A EL+ L G I + +IL LTVLAWGNS+GDLV+++A+ G +A++GC+AGPMFN LVGLG +++ Sbjct: 386 CTKFTSLLEIPLTIPRRLTIPSVEEDTWSKTYAVASVSLAPVLLASLWSS----QDDVSLQACGVAY-FFSVVIGSTLGFLAYKNTEPDHPPRRFLIPWVLGGFIMSIVWFYMIANELVALLVTFGEIYGINPSILALTVLAWGNSMGDLVSNIALTMNGGDGVQIALSGCYAGPMFNTLVGLGMSML 568
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: NCX7_CAEEL (Putative sodium/calcium exchanger 7 OS=Caenorhabditis elegans GN=ncx-7 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 57/171 (33.33%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 122 ILKLTIPETDPLEWNRFYSSANIILCPLLLLYACSSFLPFDHPIAFLLPNTHFPLWFIVXXXXXXXXXXXXIVETEA---PKTEQMPVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLG 625 + KLTIP + + W++ + + CP LL++ FL P + P ++ +V TE PK + F+MS+ WI ++ E++N + +G + + +LGLT+LAW NS+GDL+ADV+V K G+P MAMA GP+FN+L+G G Sbjct: 435 LFKLTIPLNE-MSWSKPLTLLHAFTCPAFLLFSIQFFLE--------TPFSGSPGLWVYGLAVSIVLAILIMVFTELSVQPKYYKEIYSYSGFIMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVVKQGYPRMAMAAAIGGPLFNLLMGFG 596
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: NCX6_CAEEL (Putative sodium/calcium exchanger 6 OS=Caenorhabditis elegans GN=ncx-6 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 122 ILKLTIPETDPLEWNRFYSSANIILCPLLLLYACS--SFLPFDHPIAFLLPNTHFPLWF---IVXXXXXXXXXXXXIVETEAPKTEQMPVVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLG 625 + KLTIP ++ W++ + ++CP+ LL+ S PF PN+ LW I+ + E P + + + F+MS+ WI ++ E++N + +G + + +LGLT+LAW NS+GDL+ADV+VAK G+P MAMA G +FN+L+G G Sbjct: 353 LFKLTIPHSEQ-PWSKPITLLQCLICPVFLLFCIQVCSISPF--------PNSP-GLWMYGLILSVLLTAAVLFFTELHKEPPFYKSL-ISYAGFLMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMAMAAAIGGQLFNLLIGFG 514
BLAST of FC931646 vs. ExPASy Swiss-Prot
Match: YDL6_SCHPO (Putative cation exchanger C3A12.06c OS=Schizosaccharomyces pombe GN=SPAC3A12.06c PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 374 VVIIAFVMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLG 625 V I FV+ + WIST+A E++ L A+G I L +ILGLTV A GNS+ DL+AD+ +A++G P MAM G F GP N+L+G+G Sbjct: 584 VSFIGFVLGIIWISTIANEVVGILRALGVIFNLNESILGLTVFAAGNSLSDLIADIMIARSGFPEMAMGGVFGGPTLNILIGIG 667 The following BLAST results are available for this feature:
BLAST of FC931646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931646 ID=FC931646; Name=FC931646; organism=Citrus clementina; type=EST; length=697bpback to top |