FC931649
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.956e-20 Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 298 RARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFRDG--PLVVFHRTVDDRXXXXXXXXXXXXXXXXXHVWLNVXVSLLIGV 687 RA+ TTQS+ +T RPWR++LD+ A++ P EA HLK N+S FR NYA+ VLAI+FL L++HP+SM LYF RD +V+ + VDD+ V NV VSL+IG+ Sbjct: 35 RAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGL 166
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 289 FLTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFRDGPLVVFHRTVDDRXXXXXXXXXXXXXXXXXHVWLNVXVSLL 678 +++RA+ +S +TRRPW+ + D ++T P +A +K NL FR NYA+ VL ILFLSLL+HP S+ LYF RD PLVVF +DDR H N+ SLL Sbjct: 21 YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLL 150
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 292 LTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFRDGPLVVFHRTVDDR 594 L+RA+ ++ +TRR WR + D H++ P V +A +K NL+ FR+NYA++VL ++F SL+WHP S+ LYF RD P+ +F +DDR Sbjct: 22 LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDR 122
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 292 LTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFRDGPLVVFHRTVDDRXXXXXXXXXXXXXXXXXHVWLNVXVSLLIG 684 ++RA+ + +TRR WR + D+H+ P V + +K NL+ FR NYA+++L ++F SL+WHP S+ LYF RD PL VF +DDR + N+ +L+ G Sbjct: 22 ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAG 152
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 292 LTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFRDGPLVVFHRTVDDRXXXXXXXXXXXXXXXXXHVWLNVXVSLLIGV 687 +T ++T QS+ RPW LD+ A + PSS+ +AT + +NL+ FR+NY++I+ +L L+L+ P+++ LYF R+ PL +F T+DD VWL ++ GV Sbjct: 6 ITGIKETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGV 137
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 46/104 (44.23%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 289 FLTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFR--DGPLVVFHRTVDDR 594 FL+R + + S RRPW +L+D AI+RP S+ +A ++RNL F+VNY IV +L LSLL HP S+ LY FR D PLVV RT DR Sbjct: 32 FLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDR 135
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 289 FLTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFR--DGPLVVFHRTVDDR 594 F+ + +T ++ S RRPW +L D A+++P S+ +A + +++N S F+VNY + AI+ SL+ HP S+ LY FR D P+V+F RT DR Sbjct: 39 FINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDR 142
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 39/123 (31.71%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 316 QSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFRDGPLVVFHRTVDDRXXXXXXXXXXXXXXXXXHVWLNVXVSLLIG 684 +S +TRRPW+Q+LD+ + P + ++ N F+ NY ++VL +FLSL+W+P S+ LYF RD PL VF R +D R LN+ V+++ G Sbjct: 30 RSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAG 152
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 289 FLTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFR--DGPLVVFHRTVDDR 594 F +R + + S RRPW +L+D ++ RP S+ +A +++NL+ F+VNY IV +L SL HP+S+ LY FR D PLVVF RT DR Sbjct: 29 FFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDR 132
BLAST of FC931649 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 289 FLTRARDTTQSVFSTRRPWRQLLDIHAITRPSSVGEATIHLKRNLSSFRVNYAMIVLAILFLSLLWHPVSMXXXXXXXXXXXXLYFFR--DGPLVVFHRTVDDR 594 FL+R + + S RRPW +L+D + RP S+ ++ +++NL+ F+VNY+ IV +L SLL HP S+ LY FR D PLV+F R+ DR Sbjct: 31 FLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDR 134 The following BLAST results are available for this feature:
BLAST of FC931649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931649 ID=FC931649; Name=FC931649; organism=Citrus clementina; type=EST; length=692bpback to top |