FC931657

Overview
NameFC931657
Unique NameFC931657
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10777 contig Ccv1_Contig10777:760..1446. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRC_PEA (Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 7.872e-107
Identity = 186/227 (81.94%), Postives = 210/227 (92.51%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVD 686
            PKRAV+LGGGYIAVEFASIWRGMG +V+L+FRKELPLRGFDDEMRAVVARNLEGRGINLHPRT + +LIK+E+G+KVITDHGEE++ADVVLFATGR+PN+KRLNL+ VGVE D+ GA+ VDE SRTN+PSIWAVGDVTNR+NLTPVALME   FAKT FGGQ  KPDY D+P AVFCIPPLSVVGLSEEQA+EQ KGD+L+FTS+FNPM+NTISGRQEKTVMKLVVD
Sbjct:  202 PKRAVILGGGYIAVEFASIWRGMGSSVNLVFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTNLAQLIKTEDGIKVITDHGEELIADVVLFATGRSPNSKRLNLEKVGVEFDKAGAIVVDEYSRTNIPSIWAVGDVTNRLNLTPVALMEASLFAKTVFGGQASKPDYNDIPYAVFCIPPLSVVGLSEEQAVEQTKGDVLIFTSTFNPMKNTISGRQEKTVMKLVVD 428          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRC_BRARP (Glutathione reductase, cytosolic OS=Brassica rapa subsp. pekinensis GN=GR1 PE=2 SV=2)

HSP 1 Score: 380.948 bits (977), Expect = 3.307e-105
Identity = 183/227 (80.62%), Postives = 207/227 (91.19%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVD 686
            PKRA+VLGGGYIAVEFASIWRGMG TVDL FRKELPLRGFDDEMRA+VARNLEGRGINLHP+T++ ELIK+++G+KVI+ HGEE VADVVLFATGR PNTKRLNL+AVGVE+DQ GAVKVDE SRTN+PSIWAVGD TNR+NLTPVALME  CFA T FGG+P K DY +V CAVFCIPPL+VVGLSEE+A+E+  GDILVFTS FNPM+NTISGRQEK++MKL+VD
Sbjct:  206 PKRAIVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRALVARNLEGRGINLHPQTSLAELIKTDDGIKVISSHGEEFVADVVLFATGRIPNTKRLNLEAVGVELDQAGAVKVDEYSRTNIPSIWAVGDATNRINLTPVALMEATCFANTVFGGKPAKADYTNVACAVFCIPPLAVVGLSEEEAVEKATGDILVFTSGFNPMKNTISGRQEKSLMKLIVD 432          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRC_ARATH (Glutathione reductase, cytosolic OS=Arabidopsis thaliana GN=At3g24170 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.320e-105
Identity = 181/227 (79.74%), Postives = 207/227 (91.19%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVD 686
            PKRA+VLGGGYIAVEFASIWRGMG TVDL FRKELPLRGFDDEMRA+VARNLEGRG+NLHP+T++ +L K+++G+KVI+ HGEE VADVVLFATGR+PNTKRLNL+AVGVE+DQ GAVKVDE SRTN+PSIWAVGD TNR+NLTPVALME  CFA T FGG+P K +Y +V CAVFCIPPL+VVGLSEE+A+EQ  GDILVFTS FNPM+NTISGRQEKT+MKL+VD
Sbjct:  203 PKRAIVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRALVARNLEGRGVNLHPQTSLTQLTKTDQGIKVISSHGEEFVADVVLFATGRSPNTKRLNLEAVGVELDQAGAVKVDEYSRTNIPSIWAVGDATNRINLTPVALMEATCFANTAFGGKPTKAEYSNVACAVFCIPPLAVVGLSEEEAVEQATGDILVFTSGFNPMKNTISGRQEKTLMKLIVD 429          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRP_SPIOL (Glutathione reductase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 1.257e-104
Identity = 185/227 (81.50%), Postives = 206/227 (90.75%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVD 686
            PKR V+LGGGYI+VEFASIWRGMG  V+L FRKELPLRGFDDEMRA VARNLEGRG+N+HPRTT+ EL+K++ GV   TDHGEEI ADVVLFATGR+PNTKRLNL+A+GVE+D+TGAVKVDE SRT+VPSIWA+GDVTNRMNLTPVALMEG CFAKT FGGQ  KPDY ++ CAVF IPPL+VVGLSEEQAIEQ  GDILVFTSSFNPM+NTISGRQEKT+MKLVVD
Sbjct:  193 PKRVVILGGGYISVEFASIWRGMGADVNLCFRKELPLRGFDDEMRAAVARNLEGRGVNVHPRTTLTELVKTDGGVVARTDHGEEIEADVVLFATGRSPNTKRLNLEALGVELDRTGAVKVDEYSRTSVPSIWAIGDVTNRMNLTPVALMEGTCFAKTVFGGQNSKPDYSNIACAVFSIPPLAVVGLSEEQAIEQASGDILVFTSSFNPMKNTISGRQEKTIMKLVVD 419          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRC_ORYSJ (Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica GN=GRC2 PE=2 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 2.897e-101
Identity = 177/228 (77.63%), Postives = 203/228 (89.04%), Query Frame = 3
Query:    3 VPKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVD 686
            +PKRAV+LGGGYIAVEFASIW+GMG  VDL +RKELPLRGFDDEMR VVA NLEGRGI LHP T + EL K+ +G+KV+TD GEEI+ADVVLFATGR PN++RLNL+A GVEVD  GA+KVD+ SRT+VP+IWAVGDVTNR+NLTPVALME  CF+KT FGGQP KPDYRDVPCAVF IPPLSVVGLSE+QA+E+ K D+LV+TSSFNPM+N+IS RQEKTVMKLVVD
Sbjct:  199 LPKRAVILGGGYIAVEFASIWKGMGAHVDLFYRKELPLRGFDDEMRTVVASNLEGRGIRLHPGTNLSELSKTADGIKVVTDKGEEIIADVVLFATGRTPNSQRLNLEAAGVEVDNIGAIKVDDYSRTSVPNIWAVGDVTNRINLTPVALMEATCFSKTVFGGQPTKPDYRDVPCAVFSIPPLSVVGLSEQQALEEAKSDVLVYTSSFNPMKNSISKRQEKTVMKLVVD 426          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRP_PEA (Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum GN=GR PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.362e-58
Identity = 116/227 (51.10%), Postives = 162/227 (71.37%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVV 683
            P++  ++GGGYIA+EFA I+ G+   V +  R++  LRGFD+E+R  VA N+  RGI  H   +   + K+ +G + + T+ G E     ++FATGR+PNTK L L++VGV+V + G+++VDE S+T+VPSIWA+GD TNR+NLTPVALMEG+  AKT F  +P KPDYR +P AVF  PP+  VGL+EEQA EQ  GDI VFT++F PM+ T+SG  ++  MKL+V
Sbjct:  246 PQKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVAENMALRGIEFHTEESPVAITKAADGSLSLKTNKGTEEGFSHIMFATGRSPNTKDLGLESVGVKVAKDGSIEVDEYSQTSVPSIWAIGDATNRVNLTPVALMEGVALAKTLFQNEPTKPDYRAIPSAVFSQPPIGGVGLTEEQAAEQ-YGDIDVFTANFRPMKATLSGLPDRVFMKLIV 471          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.778e-58
Identity = 117/227 (51.54%), Postives = 159/227 (70.04%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVV 683
            PK+  ++GGGYIA+EFA I+ G+   V +  R++  LRGFD+++R  V   +  RGI  H   + + +IK+ +G   + T  G       V+FATGR PNTK L L+ VGV++ + GA++VDE S+T+VPSIWAVGDVT+R+NLTPVALMEG   AKT F  +P KPDYR VPCAVF  PP+  VGL+EEQAIEQ  GD+ V+TS+F P++ T+SG  ++  MKL+V
Sbjct:  260 PKKIAIVGGGYIALEFAGIFNGLNCEVHVFIRQKKVLRGFDEDVRDFVGEQMSLRGIEFHTEESPEAIIKAGDGSFSLKTSKGTVEGFSHVMFATGRKPNTKNLGLENVGVKMAKNGAIEVDEYSQTSVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQNEPTKPDYRAVPCAVFSQPPIGTVGLTEEQAIEQ-YGDVDVYTSNFRPLKATLSGLPDRVFMKLIV 485          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.966e-57
Identity = 114/227 (50.22%), Postives = 158/227 (69.60%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVV 683
            P +  ++GGGYIA+EFA I+ G+   V +  R++  LRGFD+E+R  V   +  RGI  H   + + ++KS +G + + T  G       ++FATGR PNTK L L+ VGV++ + GA++VDE SRT+VPSIWAVGDVT+R+NLTPVALMEG   AKT F  +P KPDYR+VP AVF  PP+  VGL EEQAI++  GD+ V+T++F P++ TISG  ++  MKL+V
Sbjct:  252 PNKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVGEQMSLRGIEFHTEESPQAIVKSADGSLSLKTSRGTVEGFSHIMFATGRRPNTKNLGLETVGVKMTKNGAIEVDEYSRTSVPSIWAVGDVTDRINLTPVALMEGGALAKTIFAHEPTKPDYRNVPAAVFSQPPIGQVGLMEEQAIKE-FGDVDVYTANFRPLKATISGLPDRVFMKLIV 477          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHRP_SOYBN (Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.558e-54
Identity = 112/227 (49.34%), Postives = 155/227 (68.28%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG-VKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVV 683
            P +  ++GGGYIA+EFA I+ G+   V +  R++  LRGFD+E+R  V   +  RGI  H   + + + KS +G   + T+ G       ++FATGR PNT+ L L++VGV++ + GA++VDE S+T+V SIWAVGDVTNR+NLTPVALMEG    KT F   P KPDYR VP AVF  PP+  VGL+EEQA++Q  GDI +FT++F P++ T+SG  ++  MKLVV
Sbjct:  238 PVKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVEEQMSVRGIEFHTEESPQAITKSADGSFSLKTNKGTVDGFSHIMFATGRRPNTQNLGLESVGVKLAKDGAIEVDEYSQTSVYSIWAVGDVTNRINLTPVALMEGGALVKTLFQDNPTKPDYRAVPSAVFSQPPIGQVGLTEEQAVQQ-YGDIDIFTANFRPLKATLSGLPDRVFMKLVV 463          
BLAST of FC931657 vs. ExPASy Swiss-Prot
Match: GSHR_BURCE (Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.846e-48
Identity = 106/227 (46.70%), Postives = 144/227 (63.44%), Query Frame = 3
Query:    6 PKRAVVLGGGYIAVEFASIWRGMGPTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGMCFAKTGFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVD 686
            P R  ++GGGYIA EFA I+ G+G  V  L R    LRGFDDE+R  +   L+  GI+L     +  + +    + V    G+ +  D V+ ATGR PNT  L L+ V V +DQ GA+KVDE SRT+ P I+AVGDVTNR+NLTPVA+ EG  FA T FGG+    ++ +VP AVF  P  + VGLSE QA ++   ++ ++ S+F PMR  +SGR EK ++KLVV+
Sbjct:  167 PPRIAIIGGGYIACEFAGIFNGLGRHVVQLHRGSQVLRGFDDELREHLGDELKKSGIDLRLGVDVVAVERQRGALSVQLTTGDAMEVDAVMAATGRLPNTWGLGLETVDVGLDQNGAIKVDEYSRTSSPGIYAVGDVTNRLNLTPVAIHEGHAFADTVFGGKALPTEHENVPFAVFSQPQAASVGLSEAQARDR-YSNVEIYGSAFRPMRAALSGRDEKALVKLVVN 392          
The following BLAST results are available for this feature:
BLAST of FC931657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
GSHRC_PEA7.872e-10781.94Glutathione reductase, cytosolic OS=Pisum sativum ... [more]
GSHRC_BRARP3.307e-10580.62Glutathione reductase, cytosolic OS=Brassica rapa ... [more]
GSHRC_ARATH4.320e-10579.74Glutathione reductase, cytosolic OS=Arabidopsis th... [more]
GSHRP_SPIOL1.257e-10481.50Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRC_ORYSJ2.897e-10177.63Glutathione reductase, cytosolic OS=Oryza sativa s... [more]
GSHRP_PEA1.362e-5851.10Glutathione reductase, chloroplastic/mitochondrial... [more]
GSHRP_ARATH1.778e-5851.54Glutathione reductase, chloroplastic OS=Arabidopsi... [more]
GSHRP_TOBAC1.966e-5750.22Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRP_SOYBN1.558e-5449.34Glutathione reductase, chloroplastic OS=Glycine ma... [more]
GSHR_BURCE2.846e-4846.70Glutathione reductase OS=Burkholderia cepacia GN=g... [more]

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Properties
Property NameValue
Genbank descriptionC34107E12EF PostHarvP1 Citrus clementina cDNA clone C34107E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931657 ID=FC931657; Name=FC931657; organism=Citrus clementina; type=EST; length=687bp
GAGTTCCCAAGCGTGCTGTGGTGCTTGGTGGAGGGTACATTGCTGTTGAG
TTTGCTTCCATATGGCGAGGGATGGGTCCTACTGTGGATCTATTATTTAG
AAAGGAACTTCCATTAAGAGGGTTTGATGATGAAATGCGGGCAGTAGTTG
CCAGAAATCTGGAAGGGAGGGGAATTAATTTGCACCCGAGGACTACCATA
AAGGAGTTGATTAAGTCAGAGGAGGGTGTAAAAGTTATTACAGATCATGG
TGAAGAGATTGTTGCAGATGTTGTACTCTTTGCCACTGGCAGGGCACCTA
ATACAAAAAGGTTGAATTTGAAAGCTGTTGGTGTGGAAGTTGATCAAACA
GGAGCTGTGAAGGTGGACGAGAACTCACGCACAAACGTACCTAGTATATG
GGCTGTTGGTGATGTAACTAATCGAATGAATCTTACCCCTGTCGCCTTGA
TGGAGGGAATGTGCTTTGCAAAAACTGGTTTTGGTGGACAACCCTGCAAA
CCAGACTACAGGGATGTACCCTGTGCTGTATTTTGCATACCTCCTCTCTC
TGTAGTGGGTCTCAGTGAGGAGCAGGCCATAGAGCAAGGAAAGGGTGATA
TCCTTGTTTTCACATCAAGCTTCAATCCCATGAGGAACACTATCTCTGGA
CGGCAAGAGAAGACAGTAATGAAGCTAGTGGTGGATG
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