FC931660

Overview
NameFC931660
Unique NameFC931660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.034e-68
Identity = 134/220 (60.91%), Postives = 164/220 (74.55%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N A L+ALRGSNI+LLLGVPN +L                  R+YAN VKF+YIAVGNEV P    +  +  FL+PAM+NI+ AI  AGL  +IKVSTAIDT VLG+  PPS G+F+ +    L P+IRFLV +Q+PLLVNLYPY +Y GNT+DIRLD+ALFT+  V VQDG FGYRNLFDA+LD VYAALEKAGGGSL++V+SE+GWP+A GTA ++DN
Sbjct:   75 NPAALEALRGSNIKLLLGVPNENLQYIALSQANANAWVQNNVRNYAN-VKFKYIAVGNEVKP----SDSFAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDYALFTAPSVVVQDGNFGYRNLFDAMLDGVYAALEKAGGGSLKVVISETGWPSAAGTATTIDN 289          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 255.758 bits (652), Expect = 1.493e-67
Identity = 132/220 (60.00%), Postives = 163/220 (74.09%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            NQA LQALRGSNIE++LGVPNSDL                  R++   VKFRYIAVGNEVSP+ G T+    +LLPAM+NIRNAI +AGL N IKVS+++D  ++G++ PPS+G+FR DVR F+DP+I F+    +PLLVN+YPY SY GN RDI L +ALFT+  V VQDG  GYRNLFDA+ DAVYAAL +AGGGS+ IVVSESGWP+AG  AA+ +N
Sbjct:   68 NQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTG-TSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGSLGYRNLFDAMSDAVYAALSRAGGGSIEIVVSESGWPSAGAFAATTNN 286          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.493e-67
Identity = 140/221 (63.35%), Postives = 163/221 (73.76%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAG-GTAASVDN 661
            +Q TL+ALRGSNIEL+LGVPN DL                  R+Y N VKFRYIAVGNEVSPLN E ++YVP LL AM+NI+ AI  AGLGNQIKVSTAI+T +  D SPPS G F+ DVR+F++P+I FLV N+APLLVNLYPY + I N  DI+L++ALFTS  V V D   GYRNLFDAILDA Y+ALEKA G SL IVVSESGWP+AG G   S+DN
Sbjct:   61 DQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVRNYGN-VKFRYIAVGNEVSPLN-ENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLVNLYPYFA-IANNADIKLEYALFTSSEVVVNDNGRGYRNLFDAILDATYSALEKASGSSLEIVVSESGWPSAGAGQLTSIDN 278          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.397e-65
Identity = 129/217 (59.45%), Postives = 159/217 (73.27%), Query Frame = 2
Query:   14 LQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVR-RFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            L+ALRGSNIELLL +PN +L                  ++YAN V+FRY++VGNEV P +     +  FL+PA++NI+ AI  AGLGNQ+KVSTAIDT  L ++ PPSKG+F+ D R  +LD VIRFLV+N APL+VN+Y Y +Y  N +DI LD+ALF S  V VQDG  GYRNLFDA +DAVYAALEKAGGGSL IVVSESGWP++GGTA S+DN
Sbjct:   73 LEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEVKPEHS----FAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALFRSPSVVVQDGSLGYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWPSSGGTATSLDN 285          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 6.936e-65
Identity = 126/220 (57.27%), Postives = 160/220 (72.73%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N  TLQAL+GS IEL+L VPN+ L                   +YA+ VKFRYIAVGNEV P  G   QY  ++LPAM+N+++AI +AGL  QIKVSTA  + VLG + PPS G+F  D   F++P+I FL +N +PLL N+YPY SY G+T++IRLD+ALFT+  V VQDG + Y+NLFDA+LDA+YAALEKAGG +L+IVVSESGWP+ GGTAA+VDN
Sbjct:    7 NSDTLQALKGSGIELILDVPNTSLQSLASDASAASTWVQNNVVNYASDVKFRYIAVGNEVLP-TGSNAQYAQYVLPAMKNVQSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSDASSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTASGVVVQDGSYQYQNLFDALLDALYAALEKAGGSNLKIVVSESGWPSEGGTAATVDN 225          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.002e-63
Identity = 128/220 (58.18%), Postives = 158/220 (71.82%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N+A L+ALRGSNIEL+LGVPNSDL                  R + + V FRYIAVGNE+SP+N  T     F+LPAM+NI +AI +AGL +QIKVSTAID  ++G++ PPS G FR DVR +LDP+I FL   ++PLL N+YPY +Y  N RDI L +ALFTS  V V DGQ GY+NLFDA LDA+Y+ALE+A GGSL +VVSESGWP+AG  AA+ DN
Sbjct:   73 NRAVLEALRGSNIELILGVPNSDLQSLTNPSNAKSWVQKNV-RGFWSSVLFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLDPIIGFLSSIRSPLLANIYPYFTYAYNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSESGWPSAGAFAATFDN 291          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.036e-60
Identity = 120/220 (54.55%), Postives = 154/220 (70.00%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   LQAL+GSNIE++LG+PNSD+                  +D+   VK +YIAVGNE+SP+ G T+    FL PAM NI  AI  AGLGN IKVST++D  ++G++ PPS+G+FR D R F+DP++ FL D +APLLVN+YPY SY GN   I L ++LFT+  V VQDG   YRNLFDA+LD+VYAALE++GG S+ IVVSESGWP+AG   A+ DN
Sbjct:   70 NHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDN 288          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 120/220 (54.55%), Postives = 153/220 (69.55%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   LQAL+GSNIE++LG+PNSD+                  +D+   VK +YIAVGNE+SP+ G T+    FL PAM NI  AI  AGLGN IKVST++D  ++G++ PPS+G+FR D R F DP++ FL D +APLLVN+YPY SY GN   I L ++LFT+  V VQDG   YRNLFDA+LD+VYAALE++GG S+ IVVSESGWP+AG   A+ DN
Sbjct:   70 NHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDN 288          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 120/220 (54.55%), Postives = 153/220 (69.55%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   LQAL+GSNIE++LG+PNSD+                  +D+   VK +YIAVGNE+SP+ G T+    FL PAM NI  AI  AGLGN IKVST++D  ++G++ PPS+G+FR D R F DP++ FL D +APLLVN+YPY SY GN   I L ++LFT+  V VQDG   YRNLFDA+LD+VYAALE++GG S+ IVVSESGWP+AG   A+ DN
Sbjct:   71 NHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDN 289          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.938e-60
Identity = 119/220 (54.09%), Postives = 153/220 (69.55%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   L ALRGSNIE++LG+PN D+                  RD+   VK +YIAVGNE+SP+ G T+   PF +PA+ NI  AI  AGLGN IKVST++D  ++G++ PPS+G+FR DVR F DP++ FL D +APLLVN+YPY SY GN   I L +ALFT+  V VQDG   YRNLFDA+LD+VYAA+++ GGGS+ IVVSESGWP+AG   A+ +N
Sbjct:   62 NHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTG-TSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMDRTGGGSVGIVVSESGWPSAGAFGATHEN 280          
The following BLAST results are available for this feature:
BLAST of FC931660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13B_PRUPE1.034e-6860.91Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
GUB_NICPL1.493e-6760.00Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E13H_TOBAC1.493e-6763.35Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13A_SOYBN1.397e-6559.45Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13B_VITVI6.936e-6557.27Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13B_HEVBR1.002e-6358.18Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_NICPL1.036e-6054.55Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13F_TOBAC1.768e-6054.55Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC1.768e-6054.55Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_SOLLC3.938e-6054.09Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]

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Properties
Property NameValue
Genbank descriptionC34107F03EF PostHarvP1 Citrus clementina cDNA clone C34107F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931660 ID=FC931660; Name=FC931660; organism=Citrus clementina; type=EST; length=662bp
GAATCAAGCAACTCTCCAAGCCCTTAGAGGCTCAAACATCGAGCTCCTCC
TCGGTGTGCCCAACTCTGACCTTCAAAACGTCGCCGCAAGCCAGGCCAAC
GCTAACTCATGGGTCCAGAACAACGTCAGAGACTACGCCAACGGCGTCAA
GTTTCGCTACATCGCCGTGGGAAACGAAGTCAGCCCCTTGAATGGCGAAA
CAACCCAGTACGTGCCTTTCCTCCTCCCCGCCATGCAAAATATTCGCAAC
GCGATCTTAGCAGCCGGCCTTGGGAACCAAATCAAAGTTTCCACGGCAAT
CGACACCCGGGTTCTTGGAGACGCGTCCCCTCCTTCGAAGGGCACTTTCA
GGCCCGACGTCCGAAGATTTCTTGATCCTGTTATTAGGTTCTTAGTTGAC
AACCAGGCTCCTTTGTTAGTTAATTTGTATCCGTATATTAGTTATATTGG
CAACACTAGGGACATTCGTCTTGATTTTGCACTCTTTACTTCTGATGTTG
TGAGAGTGCAAGATGGGCAGTTTGGTTACAGGAATCTTTTTGATGCGATT
TTGGATGCTGTATACGCGGCGTTAGAGAAGGCCGGAGGGGGTTCCTTGAG
GATTGTGGTGTCGGAGAGCGGTTGGCCGACGGCGGGAGGGACGGCGGCGA
GCGTTGATAATG
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