FC931662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL2_ASHGO (60S ribosomal protein L2 OS=Ashbya gossypii GN=RPL2 PE=4 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 4.138e-93 Identity = 162/227 (71.37%), Postives = 191/227 (84.14%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIRNQRKG GSIFT++TRL + A+ RTLD+AE HGY RGVVK+I+HDAGRGAPLAKV FR PYK+K+ ETFIANEG++TGQFIYAGKNA+L VGNILPL S+PEGT+++NVEE+ GDRGAL RTSGNYV VIGHNP++ KTR++LPSGAKK++ + ARG++G++AGGGR DKPLLKAGRA HK+ VKRNSWPKTRGVAMNPVD STISR Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREETFIANEGVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERPGDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLLKAGRAFHKYKVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 1.019e-91 Identity = 160/227 (70.48%), Postives = 189/227 (83.26%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIRNQRKG GSIFT++TRL + A+ RTLD+AE HGY RGVVK+I+HDAGRGAPLAKV FR PYK+K+ E FIANEG++TGQFIYAGK A+L VGN+LPL S+PEGT+++NVEEK GDRGAL R SGNYV +IGHNP++ KTRV+LPSGAKK+I + ARG++G++AGGGRTDKPLLKAGRA HK+ +KRNSWPKTRGVAMNPVD STISR Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLLKAGRAFHKYKLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL2_YEAST (60S ribosomal protein L2 OS=Saccharomyces cerevisiae GN=RPL2A PE=1 SV=3) HSP 1 Score: 332.028 bits (850), Expect = 1.922e-90 Identity = 157/227 (69.16%), Postives = 188/227 (82.82%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIRNQRKG GSIFT++TRL + A+ RTLD+AE HGY RG+VK+I+HD+GRGAPLAKV FR PYK+++ E FIANEG++TGQFIYAGK A+L VGN+LPL S+PEGT+++NVEEK GDRGAL R SGNYV +IGHNP++ KTRV+LPSGAKKVI + ARG++G++AGGGR DKPLLKAGRA HK+ +KRNSWPKTRGVAMNPVD STISR Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 322.783 bits (826), Expect = 1.166e-87 Identity = 156/208 (75.00%), Postives = 179/208 (86.06%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVD 662 MGRVIR QRK G IF A+TRL K AQ RTLDFAE HGY RGVV++IIHD GRGAPLAKV FR+PY ++ ETF+A EGMYTGQF+Y GKNAALTVGN+LP+ MPEGT+I+NVEEKAGDRGALGR+SGNYV ++GH+ + GKTRVKLPSGAKKV+ ++ARG+VGIVAGGGR DKPLLKAGRA HK+ VKRN WP+TRGVAMNPVD Sbjct: 1 MGRVIRAQRKS-GGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVD 207
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.076e-80 Identity = 143/227 (63.00%), Postives = 171/227 (75.33%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIR QRKG GS+F ++T+ K + R+LD+AE HGY +GVVK+IIHD GRGAPLA V FR PYKFK E FIA EG+YTGQF+Y GK A L VGN++P+ +MPEGT++ N+EEK GDRG L R SGN+ TVIGHNP+ +TRVKLPSGAKKV+ ++ RGMVGIVAGGGR DKP+LKAGRA HK+ VKRN WP RGVAMNPV+ ST+ R Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.076e-80 Identity = 143/227 (63.00%), Postives = 171/227 (75.33%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIR QRKG GS+F ++T+ K + R+LD+AE HGY +GVVK+IIHD GRGAPLA V FR PYKFK E FIA EG+YTGQF+Y GK A L VGN++P+ +MPEGT++ N+EEK GDRG L R SGN+ TVIGHNP+ +TRVKLPSGAKKV+ ++ RGMVGIVAGGGR DKP+LKAGRA HK+ VKRN WP RGVAMNPV+ ST+ R Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 4.018e-80 Identity = 145/227 (63.88%), Postives = 170/227 (74.89%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIR QRKG GS+F A+ + K A+ R+LDFAE GY RGVVK+IIHD GRGAPLA V FR PY++K+ E FIA EGM+TGQF+Y G+ A L +GN++PL+ MPEGT+I N+EEK GDRG L RTSGNY TVI HN + KTRVKLPSGAKKV+ + R MVGIVAGGGR DKP+LKAGRA HK+ VKRNSWPK RGVAMNPV+ ST+ R Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 295.049 bits (754), Expect = 2.604e-79 Identity = 140/227 (61.67%), Postives = 169/227 (74.45%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIR QRKG GS+F A+T+ K + R LD+AE HGY +GVVK+IIHD GRGAPLA V FR PY+F++ + FIA EGMYTGQF+Y G+ A L +GN+LP+ MPEGT++ N+EEK GDRG L RTSGNY +VI HNP+ +TRVKLPSGAKKV+ + R M+GIVAGGGR DKP+LKAGRA HK+ VKRN WPK RGVAMNPV+ ST+ R Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.604e-79 Identity = 142/227 (62.56%), Postives = 167/227 (73.57%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIR QRKG GS+FTA+T+ K + R LD+AE HGY +G VK+IIHD GRGAPLA V FR PYKF + + FIA EGMYTGQF+Y GK A L +GN+LP+ MPEGT++ N+EEK GDRG L RTSGNY +VI HNP+ +TRVKLPSGAKKV+ + R MVGIVAGGGR DKP+LKAGRA K+ VKRN WPK RGVAMNPV+ ST+ R Sbjct: 1 MGRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAVVHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
BLAST of FC931662 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 294.664 bits (753), Expect = 3.401e-79 Identity = 141/227 (62.11%), Postives = 168/227 (74.01%), Query Frame = 3 Query: 39 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDXXXXXXXXXXXXXXSTISR 719 MGRVIR QRKG GS+F A+ + K A+ R +DFAE HGY +G+VK+IIHD GRGAPLAKV FR PY+FK TE F+A EG++TGQF+Y GK A L +GN+LP+ +MPEGT++ VEEK GDRG L R SGNY TVI HNPE KTRVKLPSG+KKVI + R +VG+VAGGGR DKP+LKAGRA HK+ KRN WP+ RGVAMNPV+ STI R Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRR 227 The following BLAST results are available for this feature:
BLAST of FC931662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931662 ID=FC931662; Name=FC931662; organism=Citrus clementina; type=EST; length=723bpback to top |