FC931670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 7.061e-82 Identity = 153/213 (71.83%), Postives = 172/213 (80.75%), Query Frame = 1 Query: 64 MGGKSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 MGGKSA K YF+KL+ LL +Y +IFIV VDNVSSQQMHEIR +LRGEAVVLMGKNTMVRRALK FV + PE+ERLLP V+GNVGF+FT GDLK ++KIL DVW+PAGNTGMEPGKT+FFQALGVPTKIARGTIEI +DLKLVEAG KVG SEATLLN+LNISPFTYGM I QVY+ G F +DVLDI++EQLL AF Sbjct: 1 MGGKSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPEYERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAF 213
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 6.609e-80 Identity = 150/213 (70.42%), Postives = 170/213 (79.81%), Query Frame = 1 Query: 64 MGGKSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 MGGKSA K YF+KL+ LL EY +IFIV VDNVSSQQMHEIR ALR + VVLMGKNTMVRRALK F+ ++PE+ERLLP V+GNVGF+FT GDLK ++KIL DVW+PAGNTGMEPGKT+FFQALGVPTKIARGTIEI +DLKLVEAG KVG SEATLLN+LNISPFTYGM I QVY+ G F + VLDI++EQLL AF Sbjct: 1 MGGKSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFLVDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGIAQVYDQGNTFPSSVLDISEEQLLKAF 213
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.973e-72 Identity = 134/213 (62.91%), Postives = 165/213 (77.46%), Query Frame = 1 Query: 64 MGGKSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 MGG K YF KLR L EY ++F+VGVDNVSSQQMHE+R LRG AVVLMGKNTMVRRA++GF+++ P++E+LLP V+G VGF+FT L K I+ +D+WV A NTGMEPGKT+FFQALGVPTKIARGTIEIVSD+K+V+AGNKVG SEA+LLNLLNISPFT+G+T+ QVY+NGQ F + +LDITDE+L++ F Sbjct: 1 MGGIREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDITDEELVSHF 213
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.064e-65 Identity = 119/204 (58.33%), Postives = 152/204 (74.51%), Query Frame = 1 Query: 82 TKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLL 693 +K YFEKLR+L +Y+++F+V +DNVSSQQMH +R LRG A ++MGKNTM+RRA++G + + PE ERLLP VRGNVGF+FT DLK +E I+ DV+VPAGNTGMEPGKT+FFQALG+PTKI RGTIEI SD+ LV KVG SEATLLN+LNISPFTYGM + +Y+ G FS ++LD+++E L+ Sbjct: 7 SKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTYGMDVLTIYDQGNVFSPEILDVSEEDLI 210
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.361e-61 Identity = 116/210 (55.24%), Postives = 155/210 (73.81%), Query Frame = 1 Query: 73 KSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 ++ K+ YF K+ LLN+Y FIVG DNV S+QM IR++LRG+A+VLMGKNTM+R+A++G + NP E+LLPH+RGNVGF+FTK DL ++ +L +V VPA NTG+ P KT+FFQALG+ TKI+RGTIEI+SD++L+ G+KVGASEATLLN+LNISPF+YG+ I QVY+NG +S +VLDIT++ L F Sbjct: 6 RATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRF 215
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.361e-61 Identity = 115/210 (54.76%), Postives = 157/210 (74.76%), Query Frame = 1 Query: 73 KSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 ++ K+ YF K+ LL++Y F+VG DNV S+QM +IRM+LRG+AVVLMGKNTM+R+A++G + NP E+LLPH+RGNVGF+FTK DL ++ +L DV VPA NTG+ P KT+FFQALG+ TKI+RGTIEI+SD++L++ G+KVGASEATLLN+LNISPF++G+ I QV++NG ++ +VLDIT+E L F Sbjct: 6 RATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRF 215
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_RANSY (60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61 Identity = 116/210 (55.24%), Postives = 157/210 (74.76%), Query Frame = 1 Query: 73 KSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 ++ K+ YF K+ LL++Y FIVG DNV S+QM +IRM+LRG+AVVLMGKNTM+R+A++G + N E+LLPH++GNVGF+FTK DL ++ +L DV VPA NTG+ P KT+FFQALG+ TKI+RGTIEI+SD++L++ G+KVGASEATLLN+LNISPF++G+ I QVY+NG +S +VLDIT++ L A F Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSIYSPEVLDITEDALRARF 215
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61 Identity = 115/210 (54.76%), Postives = 158/210 (75.24%), Query Frame = 1 Query: 73 KSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 ++ K+ YF K+ LL++Y FIVG DNV S+QM +IRM+LRG+AVVLMGKNTM+R+A++G + NP E+LLPH+RGNVGF+FTK DL ++ +L +V VPA NTG+ P KT+FFQALG+ TKI+RGTIEI+SD++L++ G+KVGASEATLLN+LNISPF++G+ I QV++NG ++ +VLDIT+E L + F Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRF 215
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61 Identity = 115/210 (54.76%), Postives = 158/210 (75.24%), Query Frame = 1 Query: 73 KSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 ++ K+ YF K+ LL++Y FIVG DNV S+QM +IRM+LRG+AVVLMGKNTM+R+A++G + NP E+LLPH+RGNVGF+FTK DL ++ +L +V VPA NTG+ P KT+FFQALG+ TKI+RGTIEI+SD++L++ G+KVGASEATLLN+LNISPF++G+ I QV++NG ++ +VLDIT+E L + F Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRF 215
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 5.261e-61 Identity = 115/210 (54.76%), Postives = 158/210 (75.24%), Query Frame = 1 Query: 73 KSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLAAF 702 ++ K+ YF K+ LL++Y FIVG DNV S+QM +IRM+LRG+AVVLMGKNTM+R+A++G + NP E+LLPH+RGNVGF+FTK DL ++ +L +V VPA NTG+ P KT+FFQALG+ TKI+RGTIEI+SD++L++ G+KVGASEATLLN+LNISPF++G+ I QV++NG ++ +VLDIT+E L + F Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRF 215 The following BLAST results are available for this feature:
BLAST of FC931670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931670 ID=FC931670; Name=FC931670; organism=Citrus clementina; type=EST; length=703bpback to top |