FC931679

Overview
NameFC931679
Unique NameFC931679
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15371 contig Ccv1_Contig15371:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 434.491 bits (1116), Expect = 2.477e-121
Identity = 191/225 (84.89%), Postives = 216/225 (96.00%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            G+TQFTPHYITWYCPEAF LSKQCKSQCINHGRYCAPD EQDF++GYDGKDVVVQNLRQAC ++V N++ KPW+WWDYVTDFAIRCPMKEKKYTKECA+ +IKSLG+DLKKVD+C+GDPEADV+N VLK EQ++QIGKGSRGDVTILPTLV+NNRQYRGKL+KGAVLKA+C+GFQE+TEPAICL+ED+ETNECLENNGGCWQDKAANITAC+DTFRGR+CECP V
Sbjct:  223 GHTQFTPHYITWYCPEAFTLSKQCKSQCINHGRYCAPDPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWVWWDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIGDPEADVENPVLKAEQESQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENNGGCWQDKAANITACRDTFRGRLCECPTV 447
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 2.399e-116
Identity = 183/225 (81.33%), Postives = 204/225 (90.67%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            GYTQFTPHYITWYCP AF LSKQCKSQCINHGRYCAPD EQDF+ GYDGKDVVV+NLRQ C FKVA E+ K W+WWDYVTDF IRCPMKEKKY KECA  VIKSLG+D++K+D+C+GDP AD +N +LK EQDAQIGKG+RGDVTILPTLV+NNRQYRGKL+KGAVLKAIC+GF+ETT+PA+CLS D+ETNECL NNGGCWQDK ANI ACKDTFRGRVCECP+V
Sbjct:  223 GYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFNTGYDGKDVVVENLRQLCVFKVAKETEKSWVWWDYVTDFQIRCPMKEKKYNKECANSVIKSLGLDVEKIDKCMGDPNADTENSILKEEQDAQIGKGTRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKTANIAACKDTFRGRVCECPLV 447
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.133e-116
Identity = 184/225 (81.78%), Postives = 207/225 (92.00%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            G+TQF PHYITWYCP AF LS+QCKSQCIN GRYCAPD EQDFS GYDGKDVVV+NLRQ C +KVANE+ KPW+WWDYVTDF IRCPMKEKKY KECA+ VIKSLG+D KK+D+C+GDP+AD+DN VLK EQDAQ+GKGSRGDVTILPTLV+NNRQYRGKL+K AVLKA+C+GF+ETTEPAICLS D+E+NECL+NNGGCWQDK+ANITACKDTFRGRVCECP V
Sbjct:  228 GFTQFRPHYITWYCPHAFTLSRQCKSQCINKGRYCAPDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKECADSVIKSLGIDSKKLDKCMGDPDADLDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTFRGRVCECPTV 452
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 413.305 bits (1061), Expect = 5.909e-115
Identity = 181/225 (80.44%), Postives = 207/225 (92.00%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            G+TQF PHYITWYCP AF LS+QCKSQCIN GRYCAPD EQDFS GYDGKDVVV+NLRQ C +KVANE+ KPW+WWDYVTDF IRCPMKEKKY K+CAE VIKSLG+D +K+D+C+GDP+AD+DN VLK EQDAQ+GKG+RGDVTILPTLV+NNRQYRGKL+K AVLKA+C+GF+E+TEPAICLS D+ETNECL+NNGGCWQDK+ANITACKDTFRG+VC CPIV
Sbjct:  228 GFTQFRPHYITWYCPHAFTLSRQCKSQCINKGRYCAPDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKDCAESVIKSLGIDSRKIDKCMGDPDADLDNPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQYRGKLEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTFRGKVCVCPIV 452
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 1.719e-114
Identity = 179/225 (79.56%), Postives = 209/225 (92.89%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            GYT+FTPHYITWYCPEAF+ S+QCK+QCIN GRYCAPD EQDFSRGY+GKDV++QNLRQACFF+V NES KPWLWWDYVTDFAIRCPMKE+KY K+CA+QVI+SLGVD+KK+D+C+GD +A+ +N VLK EQ AQ+GKGSRGDVTILPT+VINNRQYRGKL + AVLKA+C+GF+ETTEP ICL+EDIETNECL+NNGGCW+DK  NITAC+DTFRGRVC+CPIV
Sbjct:  227 GYTRFTPHYITWYCPEAFLASRQCKTQCINGGRYCAPDPEQDFSRGYNGKDVIIQNLRQACFFRVTNESGKPWLWWDYVTDFAIRCPMKEEKYNKKCADQVIQSLGVDVKKIDKCIGDIDANAENPVLKEEQVAQVGKGSRGDVTILPTIVINNRQYRGKLQRSAVLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTFRGRVCQCPIV 451
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 373.244 bits (957), Expect = 6.777e-103
Identity = 164/225 (72.89%), Postives = 194/225 (86.22%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            GYT FTPHYITW+CP  FI S  CKSQCINHGRYCAPD E +F  GY+GKDVV++NLRQ C  +VANES +PW+WWDYVTDF  RC MKEKKY+ +CAE VIKSL + ++K+ +C+GDPEAD +NQVL+TEQ +QIG+G+RGDVTILPTLVINN QYRG+L++ AVLKAICAGF ET+EPAICL+  +ETNECLENNGGCWQD  ANITAC+DTFRGR+CECP+V
Sbjct:  226 GYTAFTPHYITWFCPFQFINSPHCKSQCINHGRYCAPDPEDNFREGYEGKDVVLENLRQLCVHRVANESSRPWVWWDYVTDFHSRCSMKEKKYSIDCAESVIKSLNLPIEKIKKCIGDPEADTENQVLRTEQVSQIGRGNRGDVTILPTLVINNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTFRGRLCECPVV 450
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 373.244 bits (957), Expect = 6.777e-103
Identity = 160/225 (71.11%), Postives = 194/225 (86.22%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            GY+ FTPHYITW+CP+ ++ S QCKSQCIN GRYCAPD EQDF  GYDGKD+V +NLRQ C  KVA E+ + W+WWDYVTDF IRC MKEKKY+KECAE+V++SLG+ L K+ +C+GDP+A+V+N+VLK EQ  Q+G+G RGDVTILPTL++NN QYRGKL++ AVLKAIC+GF+E TEP ICLS DIETNECLE NGGCW+DK +N+TACKDTFRGRVCECP+V
Sbjct:  225 GYSLFTPHYITWFCPKDYVSSNQCKSQCINQGRYCAPDPEQDFGDGYDGKDIVFENLRQLCVHKVAKENNRSWVWWDYVTDFHIRCSMKEKKYSKECAERVVESLGLPLDKIKKCIGDPDANVENEVLKAEQALQVGQGDRGDVTILPTLIVNNAQYRGKLERNAVLKAICSGFKERTEPGICLSGDIETNECLEANGGCWEDKKSNVTACKDTFRGRVCECPVV 449
[Close]
BLAST of FC931679 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 8.023e-96
Identity = 151/225 (67.11%), Postives = 189/225 (84.00%), Query Frame = 3 
Query:    6 GYTQFTPHYITWYCPEAFILSKQCKSQCINHGRYCAPDSEQDFSRGYDGKDVVVQNLRQACFFKVANESRKPWLWWDYVTDFAIRCPMKEKKYTKECAEQVIKSLGVDLKKVDECVGDPEADVDNQVLKTEQDAQIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIV 680
            GYT F PHYI+W CP+  +LSKQC++QCIN GRYCA D++Q+F  GY+GKDVV +NLRQ C  KVA E    W+WWDYVTDF IRC MKEKKY++ECAE +++SLG+ L+K+ +C+GDP+ADV+N+VLK E+  Q+G+ +RG VTI PTL+INN QYRGKL++ AVLKAIC+GF+E TEP+ICL+ DIETNECL  NGGCWQDK +N+TACKDTFRGRVCECP+V
Sbjct:  224 GYTLFRPHYISWVCPKELLLSKQCRTQCINQGRYCALDTKQEFEDGYNGKDVVYENLRQLCVHKVAKEKNTSWVWWDYVTDFNIRCSMKEKKYSRECAETIVESLGLSLEKIKKCIGDPDADVENEVLKAEEAFQLGQENRGIVTIFPTLMINNAQYRGKLERTAVLKAICSGFKERTEPSICLNSDIETNECLIENGGCWQDKRSNVTACKDTFRGRVCECPVV 448
The following BLAST results are available for this feature:
BLAST of FC931679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH2.477e-12184.89Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR1_PEA2.399e-11681.33Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR3_ARATH3.133e-11681.78Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR4_ARATH5.909e-11580.44Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR2_ARATH1.719e-11479.56Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR7_ARATH6.777e-10372.89Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR6_ARATH6.777e-10371.11Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR5_ARATH8.023e-9667.11Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC34107G10EF PostHarvP1 Citrus clementina cDNA clone C34107G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931679 ID=FC931679; Name=FC931679; organism=Citrus clementina; type=EST; length=681bp
AGAGGGGTTACACTCAGTTCACCCCACACTATATAACTTGGTATTGTCCG
GAAGCATTTATTCTTAGCAAACAATGCAAGTCCCAGTGCATCAACCATGG
TAGGTACTGTGCGCCAGATTCTGAGCAGGACTTTAGCCGAGGGTATGATG
GAAAGGATGTTGTGGTTCAAAATTTACGTCAAGCTTGCTTCTTTAAAGTG
GCCAATGAAAGCAGAAAGCCATGGCTTTGGTGGGACTATGTGACTGACTT
TGCAATCCGTTGCCCAATGAAAGAGAAGAAGTACACCAAGGAGTGTGCAG
AGCAAGTTATCAAATCTCTTGGTGTTGACCTCAAGAAGGTAGATGAATGT
GTTGGAGATCCTGAGGCAGATGTGGACAATCAAGTTCTTAAAACCGAACA
AGATGCACAGATTGGAAAAGGCTCCCGTGGAGATGTTACTATACTGCCAA
CACTTGTTATTAACAATAGACAGTATAGAGGTAAGTTGGACAAGGGAGCA
GTTCTCAAGGCTATTTGTGCAGGTTTTCAGGAGACTACAGAGCCAGCCAT
ATGCTTAAGTGAAGATATTGAAACTAATGAATGCTTAGAAAACAATGGTG
GGTGCTGGCAGGACAAAGCCGCTAACATAACAGCATGCAAGGATACTTTC
CGAGGAAGAGTGTGCGAATGTCCTATAGTAC
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