FC931695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931695 vs. ExPASy Swiss-Prot
Match: SSRA_ARATH (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana GN=At2g21160 PE=2 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 3.972e-59 Identity = 117/194 (60.31%), Postives = 146/194 (75.26%), Query Frame = 1 Query: 163 QVARCQSDSETGVAETEGGDLGIVGEDAQDFG-------DGTFSPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSARATFPYIFAVSKFLQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALLVLFWVWIH 723 QVARCQSD+E + + +VGE+ D D S PGV+TVC+FPKNSA++V AGEETELLVG+KN+G++ V V+ I+ASVHLP+DH LLVQNLT NNA++P S +ATFPYIFAVS++LQPG FDLVG I+Y+V+ PYQS FYNGTIEVVESGG +S ESVFL+TLGI LL+L +W + Sbjct: 20 QVARCQSDAEDHSSLVDD----VVGENTDDAVEEDDHDLDMNLSSFPGVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESGGLLSGESVFLLTLGIGLLLLLGLWAY 209
BLAST of FC931695 vs. ExPASy Swiss-Prot
Match: SSRA_DICDI (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum GN=ssr1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16 Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 271 SPAPGVDTVCIFPKNSARVVAAGEETELLVGMKNDGESSVNVIAIQASVHLPFDHSLLVQNLTGQAFNNATVPVSARATFPYIFAVSKFLQPGTFDLVGSIVYEVDQHPYQSTFYNGTIEVVESGGFISIESVFLVTLGIALL 699 +P V IFP N + AAG E+LVG N+ + ++N+ I AS++ P D S+ +QN T F A V AT Y F S++L+P F L+ S+ Y+ + TF+N TI + E ++S FL+ LG+ + Sbjct: 34 TPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYTRGDFGIA-VEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTINITEKETSFDMDSFFLILLGLGFV 175 The following BLAST results are available for this feature:
BLAST of FC931695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931695 ID=FC931695; Name=FC931695; organism=Citrus clementina; type=EST; length=727bpback to top |