FC931697

Overview
NameFC931697
Unique NameFC931697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSB8_DICDI (Oxysterol-binding protein 8 OS=Dictyostelium discoideum GN=osbH PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.522e-15
Identity = 50/132 (37.88%), Postives = 64/132 (48.48%), Query Frame = 1
Query:   91 RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMS-YQPCDSEGEPLPCTELKEVWTVSDAP 483
            ++KF GNS +V   G      K+           T  HN+I G  W+D  GD+V+ N TTG K VL F   GW GAGRY V G + D     +  +TGKWNES+  +Q  D+       T L   W  S  P
Sbjct:  164 KSKFYGNSSEVEIDGTNHFFNKKTNHHYTWNHLVTCCHNIIIGSLWLDHYGDLVIENHTTGSKAVLKFAKSGWLGAGRYGVTGEIVDCEGDVRYRITGKWNESIQLFQVMDNGSSSTTSTCL---WEASKEP 292          
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSB11_DICDI (Oxysterol-binding protein 11 OS=Dictyostelium discoideum GN=osbK PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15
Identity = 36/101 (35.64%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   94 TKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNE 396
            TKF GNS+DV+  G+  + L   G       P    HN+IFG+ WI+  GD+++ N  TG+K ++ FQ  GWF   + +V G + D+    ++ + GKW++
Sbjct:  219 TKFWGNSLDVFSHGQNHLYLNSTGEHFTWKVPSAICHNIIFGKMWIEHYGDLIVENHNTGEKAIINFQKSGWFEGTQRKVQGEILDSKGNARVHINGKWDK 319          
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSBL2_MOUSE (Oxysterol-binding protein-related protein 2 OS=Mus musculus GN=Osbpl2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 1
Query:   91 RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM 402
            + KF G S++  P G   + L +         P   VHN+I G+ WI+  G + + N  TGDK +L+F+PCG FG   + V+GY+ D   +   +M GKW E +
Sbjct:  203 KLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVILGQLWIEQYGIVEIVNHRTGDKCILHFKPCGLFGKELHRVEGYIQDKNRKKLFIMYGKWTECL 306          
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSBL1_RAT (Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus GN=Osbpl1a PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1
Query:   91 RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM 402
            + KF G S++  P G   + L           P   VHN+I G+ WI+  G++ + N  TGDK VL F+PCG FG   ++V+GY+ D +++    + GKW E +
Sbjct:  676 KLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECL 779          
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSBL1_HUMAN (Oxysterol-binding protein-related protein 1 OS=Homo sapiens GN=OSBPL1A PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1
Query:   91 RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM 402
            + KF G S++  P G   + L           P   VHN+I G+ WI+  G++ + N  TGDK VL F+PCG FG   ++V+GY+ D +++    + GKW E +
Sbjct:  676 KLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECL 779          
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSBL1_MOUSE (Oxysterol-binding protein-related protein 1 OS=Mus musculus GN=Osbpl1a PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1
Query:   91 RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM 402
            + KF G S++  P G   + L           P   VHN+I G+ WI+  G++ + N  TGDK VL F+PCG FG   ++V+GY+ D +++    + GKW E +
Sbjct:  676 KLKFWGKSVEAEPKGTITLELLDHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECL 779          
BLAST of FC931697 vs. ExPASy Swiss-Prot
Match: OSBL2_HUMAN (Oxysterol-binding protein-related protein 2 OS=Homo sapiens GN=OSBPL2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 1
Query:   91 RTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM 402
            + KF G S++  P G   + L +         P   VHN+I G+ WI+  G + + N  TG K VL+F+PCG FG   ++V+G++ D  ++   ++ GKW E +
Sbjct:  203 KLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKWTECL 306          
The following BLAST results are available for this feature:
BLAST of FC931697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
OSB8_DICDI1.522e-1537.88Oxysterol-binding protein 8 OS=Dictyostelium disco... [more]
OSB11_DICDI1.988e-1535.64Oxysterol-binding protein 11 OS=Dictyostelium disc... [more]
OSBL2_MOUSE5.785e-1535.58Oxysterol-binding protein-related protein 2 OS=Mus... [more]
OSBL1_RAT9.868e-1535.58Oxysterol-binding protein-related protein 1 OS=Rat... [more]
OSBL1_HUMAN9.868e-1535.58Oxysterol-binding protein-related protein 1 OS=Hom... [more]
OSBL1_MOUSE1.683e-1435.58Oxysterol-binding protein-related protein 1 OS=Mus... [more]
OSBL2_HUMAN1.091e-1333.65Oxysterol-binding protein-related protein 2 OS=Hom... [more]
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Properties
Property NameValue
Genbank descriptionC34108A04EF PostHarvP1 Citrus clementina cDNA clone C34108A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931697 ID=FC931697; Name=FC931697; organism=Citrus clementina; type=EST; length=488bp
ATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAA
CAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACAAAAT
TTTTAGGAAACTCGATTGATGTTTATCCAGTTGGAAGGACACGTGTGACA
CTTAAAAGAGATGGGGTGGTTCTCGATTTGGTGCCCCCTCCCACAAAGGT
TCACAATTTAATTTTTGGACGAACTTGGATTGATTCACCGGGGGATATGG
TCATGACTAACTTGACCACGGGCGACAAAGTTGTGTTATATTTTCAACCA
TGTGGATGGTTTGGAGCTGGTCGCTATGAAGTGGATGGATATGTATATGA
TGCTGCTGAACAACCCAAGATATTGATGACTGGGAAATGGAATGAATCAA
TGAGTTACCAGCCCTGCGACTCAGAGGGGGAGCCACTTCCATGCACCGAA
TTGAAGGAAGTTTGGACAGTGTCAGATGCTCCTGCTGA
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