FC931707

Overview
NameFC931707
Unique NameFC931707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15377 contig Ccv1_Contig15377:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22
Identity = 57/89 (64.04%), Postives = 60/89 (67.42%), Query Frame = 2
Query:   86 MAPREKASGPAKVNGN--SNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 346
            MA + K S      GN  +NG VKEVH+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                G KAKTNFPLPSEN
Sbjct:    1 MAVKNKVSNGDLKGGNVKTNG-VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSEN 88          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.492e-21
Identity = 53/96 (55.21%), Postives = 59/96 (61.46%), Query Frame = 2
Query:   86 MAPREKASGPAKVNGNSNG-------IVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSENVT 352
            MAPR+       V+    G       + KEVHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT                G+KAKTNFPLP E+ T
Sbjct:    1 MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTT 96          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21
Identity = 54/89 (60.67%), Postives = 59/89 (66.29%), Query Frame = 2
Query:   86 MAPREKASGPAKVNGN--SNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 346
            MA + K S      GN  ++G VKEVH+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                G KAKTNFP P+EN
Sbjct:    1 MAVKNKVSNGNLKGGNVKTDG-VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPSPTEN 88          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.622e-18
Identity = 47/80 (58.75%), Postives = 52/80 (65.00%), Query Frame = 2
Query:  104 ASGPAKVNGNSNGI--VKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLP 337
            A+ PA V G  NG    KE+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+                G KAKTNFPLP
Sbjct:    7 AAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLP 86          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.164e-18
Identity = 45/73 (61.64%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  113 PAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            PA  N   N   KE+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT                GAKAKTNFP
Sbjct:   10 PATTNQTHNN-AKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  137 NGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 346
            NG VKE+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+                G KAKTNFP+ S +
Sbjct:   20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSS 89          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.219e-17
Identity = 42/68 (61.76%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  134 SNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLP 337
            S    +EVH+RGVRKRPWGRYAAEIRDP KK+RVWLGTFDT                G KAKTNFP P
Sbjct:    3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSP 70          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 46/82 (56.10%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   86 MAPREKASGPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            MAP  K +      GN       V +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT                GAKAKTNFP
Sbjct:    1 MAPTVKTAAVKTNEGNG------VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.285e-15
Identity = 43/75 (57.33%), Postives = 49/75 (65.33%), Query Frame = 2
Query:  110 GPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 334
            GPA +   + G VKE  +RGVRKRPWGR+AAEIRDP KKSRVWLGTFD+                G KAKTNFP+
Sbjct:   11 GPA-LPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPI 84          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 39/72 (54.17%), Postives = 44/72 (61.11%), Query Frame = 2
Query:  113 PAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNF 328
            P     + +   KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDT                G KAKTNF
Sbjct:   15 PTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86          
The following BLAST results are available for this feature:
BLAST of FC931707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ERF4_NICSY1.418e-2264.04Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF80_ARATH3.492e-2155.21Ethylene-responsive transcription factor 9 OS=Arab... [more]
ERF4_TOBAC5.957e-2160.67Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF3_TOBAC1.622e-1858.75Ethylene-responsive transcription factor 3 OS=Nico... [more]
ERF78_ARATH6.164e-1861.64Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF82_ARATH2.342e-1760.00Ethylene-responsive transcription factor 3 OS=Arab... [more]
ERF81_ARATH5.219e-1761.76Ethylene-responsive transcription factor 12 OS=Ara... [more]
ERF76_ARATH3.383e-1656.10Ethylene-responsive transcription factor 11 OS=Ara... [more]
ERF83_ARATH1.285e-1557.33Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF79_ARATH2.864e-1554.17Ethylene-responsive transcription factor 8 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionC34108B02EF PostHarvP1 Citrus clementina cDNA clone C34108B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931707 ID=FC931707; Name=FC931707; organism=Citrus clementina; type=EST; length=751bp
GGTCCCCACTTCCTTTTATGTTTTGTCACTCGCTCAAAACAACAAACACT
ACCCACTTGAAATAAAAATATATTACGGAAATAATATGGCGCCGAGAGAG
AAGGCGTCGGGACCTGCAAAAGTTAACGGAAACAGTAACGGTATTGTTAA
AGAGGTGCATTTTAGGGGCGTTAGAAAGAGGCCGTGGGGTCGATATGCAG
CCGAGATTAGGGATCCCGGCAAGAAGAGCCGTGTTTGGCTTGGAACCTTC
GACACCGCTGAAGAAGCCGCTCGGGCCTACGACGCTGCCGCTAGAGAATT
TCGCGGCGCCAAGGCTAAAACTAACTTCCCCTTGCCTTCTGAAAATGTAA
CCAACAAAATTAGTCACAACAATATCAACATCAACAATAATAACCAGAGC
CCCAGCCAAAGTAGTACCATAGAGTCTTCAAGCCGCGAGCCGGCTCTGAT
GATCGATTCGTCGCCGTTAGATCTCAATCTTGGTCCGGCTTGCGCCGGCG
GTGGTGCCGGTGGAGGATTTAACGCCACCGTTCGGTTTCCCTTCCAGCCT
GTGGGGGGTGCTTTCGGTGCGGCGAACCAGGTGTTTTATTTTGATCCGGT
AGCTGCGATGAAGAGTCAGCAGTATCAACGGCTCAGATTCGACCATCACC
GGAATTATAATTTTCATGCGGCGGCGGTGACGGCGGTCGGTGACGGAAGT
GTGCAGAGCGACTCTGAATCATCATCCATTGTCGATTTGAACCATCACGA
T
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