FC931717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19 Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 245 PRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMNQQLGGHRIATVLMYLSHVEKGGETVFP 637 PR + +SD E + + DLAK +L ++ V D E+GK ++ R S +LS +D +V+ I RI T L E +Q+ +Y G +YEPHFDF R D + G+RIAT L Y+S V GG TVFP Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18 Identity = 54/150 (36.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 209 FDPSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR---DKMNQQLG-GHRIATVLMYLSHVEKGGETVFPNSE 646 + P +V +NP A ++K +SD+E + +LAK KL ++ V D+ +GK + + R S +L + + ++V ++ RI T L E E +QI +Y G Y+PHFD + K + LG G+RIATVL Y+S GG TVF ++ Sbjct: 316 YAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAK 465
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 242 NPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFRDKMNQQL--GGHRIATVLMYLSHVEKGGETVFPN 640 +P Y +SDEE + + LAK KL ++ V D ++G + R S +L + D +VA + R+ T L + E +Q+ +Y G +YEPHFDF R + L G+R+AT L Y+S VE GG TVFP+ Sbjct: 336 SPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPD 470
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18 Identity = 53/135 (39.26%), Postives = 74/135 (54.81%), Query Frame = 2 Query: 245 PRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMNQQLGGHRIATVLMYLSHVEKGGETVFP 637 PR + +SDEE + + +LAK +L ++ V D E+GK + R S +LS + +V+ I RI T L E +Q+ +Y G +YEPHFDF R D + G+RIAT L Y+S V GG TVFP Sbjct: 317 PRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 451
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 2 Query: 242 NPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMNQQLGGHRIATVLMYLSHVEKGGETVFPN 640 +P Y +SDEE + + ++AK KL ++ V D ++G + R S +L + D +VA + R+ T L + E +Q+ +Y G +YEPHFDF R D + G+R+AT L Y+S VE GG TVFP+ Sbjct: 337 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPD 473
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 2 Query: 242 NPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFRDKMN---QQLG-GHRIATVLMYLSHVEKGGETVFPN 640 +P Y +SDEE + + ++AK KL ++ V D ++G + R S +L + D +VA + R+ T L + E +Q+ +Y G +YEPHFDF R+ + LG G+R+AT L Y+S VE GG TVFP+ Sbjct: 335 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPD 471
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 215 PSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFRDKMNQQL----GGHRIATVLMYLSHVEKGGETVF 634 P +V L ++P A ++K + D E + + +LA KL+++ V ++++G+ + R S +L D ++ + RI +T L E +Q+ +Y G Y+PHFDF R + G+RIATVL Y+S E+GG TVF Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF 458
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA3_RAT (Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16 Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 215 PSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFL--PPENGEAMQILHYEHGQKYEPHFDFF---RDKMNQQLGGHRIATVLMYLSHVEKGGETVF 634 P+R + P +Y F+SDEE + +LA+ L++S+VA E K + E R S +L D ++ +++ RIAA T L P E +Q+++Y G YEPHFD + + G+R AT+++YLS VE GG T F Sbjct: 336 PARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF 478
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 245 PRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFLPPENGEAMQILHYEHGQKYEPHFDFFR----DKMNQQLGGHRIATVLMYLSHVEKGGETVFP 637 PR + +SD E + + DLAK +L ++ +++ +G R S +LS +D +V+ I RI T L E +Q+ +Y G +YEPHFDF R D + G+RIAT L Y+S V GG TVFP Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC931717 vs. ExPASy Swiss-Prot
Match: P4HA3_MOUSE (Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 215 PSRVTQLSWNPRAFIYKGFLSDEECDHLIDLAKDKLEKSMVADNESGKSIASEVRTSSGMFLSKAQDEIVASIEARIAAWTFL--PPENGEAMQILHYEHGQKYEPHFDFF---RDKMNQQLGGHRIATVLMYLSHVEKGGETVF 634 P+R + P +Y F+SDEE + +LA+ L++S+VA E K + E R S +L D ++ +++ RIAA T L P E +Q+++Y G YEPHFD + + G+R+AT ++YLS VE GG T F Sbjct: 334 PARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF 476 The following BLAST results are available for this feature:
BLAST of FC931717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931717 ID=FC931717; Name=FC931717; organism=Citrus clementina; type=EST; length=723bpback to top |