FC931724

Overview
NameFC931724
Unique NameFC931724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:144..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7B4_ARATH (Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3)

HSP 1 Score: 366.311 bits (939), Expect = 9.344e-101
Identity = 178/235 (75.74%), Postives = 198/235 (84.26%), Query Frame = 1
Query:   10 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA*RKIT 714
            M  A  EYEFLSEIGL+    G +V GKW+A+GP VS++NPANNQ IA VVEASLEDYE+G+KAC EA+KIWM++ APKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWKG            KLV+EV E+N LPGAIFT+ CGGAEIG+A  K T
Sbjct:    1 MGSANNEYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKACEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDT 235          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_MALDO (Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 366.311 bits (939), Expect = 9.344e-101
Identity = 170/235 (72.34%), Postives = 200/235 (85.11%), Query Frame = 1
Query:   10 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA*RKIT 714
            M FAK+E+EFLS IGL+PE PG F+NGKWKA GP +S+++P+NNQ+IA V E S+E+YEEG+++C++A+K W  LPAPKRGE+VRQIGDALREKL HLG+L+S+EMGKIL EGIGEVQEVI MCDFAVGLSRQLNGS+IPSERP+HMM E WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWKG            KL++EV E+N LP AIFT+FCGGAEIG+A  K T
Sbjct:    1 MGFAKKEHEFLSAIGLAPENPGGFINGKWKASGPVISTVSPSNNQEIAKVTEVSMEEYEEGLRSCNDAAKTWKSLPAPKRGEIVRQIGDALREKLQHLGKLVSLEMGKILAEGIGEVQEVIYMCDFAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLVTIAVTKLIAEVLEKNNLPAAIFTAFCGGAEIGEAIAKDT 235          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_BRANA (Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3)

HSP 1 Score: 354.369 bits (908), Expect = 3.674e-97
Identity = 178/238 (74.79%), Postives = 196/238 (82.35%), Query Frame = 1
Query:   10 MEFAKQEYEFLSEIGLSPE-TPGCFVNGKWKAHGPTVSSINPANNQ--KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA*RKIT 714
            M  A +EYEFLSEIGLS     G +V GKW  +GP VS++NPANNQ   IA VVEASLEDYE G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWKG            KLV+EV E+N LPGAIFT+ CGGAEIG+A  K T
Sbjct:    1 MGSASKEYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLEDYEIGLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNHLPGAIFTAMCGGAEIGEAIAKDT 238          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_PEA (Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3)

HSP 1 Score: 332.798 bits (852), Expect = 1.145e-90
Identity = 159/226 (70.35%), Postives = 184/226 (81.42%), Query Frame = 1
Query:   37 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA*RKIT 714
            FL EIGL     G F+NG+WKA+GPTV S+NP+ NQ IA+V EA+L+DYEEG++A SEA+K W  +PAPKRGE+VRQIGDALR KL  LGRL+++EMGKIL EGIGEVQE+IDMCD++VGLSRQLNGS+IPSERP HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV GN VVWKG            KL++EVFERN LPGAIFT+ CGGA+IG A  K T
Sbjct:   10 FLKEIGLGATNIGSFINGQWKANGPTVHSVNPSTNQVIASVTEATLDDYEEGLRASSEAAKTWRTVPAPKRGEIVRQIGDALRAKLDPLGRLVALEMGKILAEGIGEVQEIIDMCDYSVGLSRQLNGSIIPSERPEHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVGGNTVVWKGAPTTPLITVAVTKLIAEVFERNNLPGAIFTALCGGADIGHAIAKDT 235          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_BOVIN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Bos taurus GN=ALDH7A1 PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 2.932e-70
Identity = 124/224 (55.36%), Postives = 162/224 (72.32%), Query Frame = 1
Query:   28 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA 699
            +Y +L E+GL  E  G + NG W   G  +++  PANN+ IA V +AS+ DYEE ++   EA  IW ++PAPKRGEVVRQIGDALREK+  LG L+S+EMGKIL EG+GEVQE +D+CD+AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN  IA++CGN  +WKG            K++++V E NKLPGAI +  CGGA+IG A
Sbjct:   10 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAREAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDYAVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTA 232          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_HUMAN (Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=4)

HSP 1 Score: 264.618 bits (675), Expect = 3.829e-70
Identity = 124/224 (55.36%), Postives = 162/224 (72.32%), Query Frame = 1
Query:   28 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA 699
            +Y +L E+GL  E  G + NG W   G  +++  PANN+ IA V +AS+ DYEE +K   EA KIW ++PAPKRGE+VRQIGDALREK+  LG L+S+EMGKIL EG+GEVQE +D+CD+AVGLSR + G ++PSER  H ++E WNP+G+VG+ITAFNFP AV GWN  IA++CGN  +WKG            K++++V E NKLPGAI +  CGGA+IG A
Sbjct:   10 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTA 232          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_MOUSE (Alpha-aminoadipic semialdehyde dehydrogenase OS=Mus musculus GN=Aldh7a1 PE=2 SV=3)

HSP 1 Score: 253.832 bits (647), Expect = 6.759e-67
Identity = 119/222 (53.60%), Postives = 157/222 (70.72%), Query Frame = 1
Query:   28 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            +Y +L ++GL  +  G + NG W   G  +++  PANN+ IA V +ASL+DYEE +    +A  IW ++PAPKRGE+VR+IGDA REK+  LGRL+S+EMGKIL EGIGEVQE +D+CD+A GLSR + G  +PSERP H ++E WNPLG+VG+ITAFNFP AV GWN  IAL+ GN  +WKG            K++++V E N LPGAI +  CGGA+IG
Sbjct:   10 QYAWLQDLGLREDNEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASLKDYEETIGKAKKAWNIWADIPAPKRGEIVRKIGDAFREKIQLLGRLVSLEMGKILVEGIGEVQEYVDVCDYAAGLSRMIGGPTLPSERPGHALIEMWNPLGLVGIITAFNFPVAVFGWNNAIALITGNVCLWKGAPTTSLVSVAVTKIIAQVLEDNLLPGAICSLVCGGADIG 230          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_CAEEL (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.355e-64
Identity = 119/224 (53.12%), Postives = 149/224 (66.52%), Query Frame = 1
Query:   28 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA 699
            +Y FL E+GL+    G F +GKW A G  V S  PANN  IA V   +++DYE  +    +A   W E+PAP+RGE+VRQIGD LR +L +LG+L+S+EMGKI  EG+GEVQE +D+CD+A GLSR L G + PSERP H +LE WNPLGVVGVI+AFNFPCAV GWN  +ALV GN VVWK             KLV EV   N +  A+ +  CG  ++GQA
Sbjct:   28 KYGFLKELGLTENNAGVF-HGKWAASGQVVQSFAPANNSPIANVQNGNVQDYEIAISEAKKAYNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDICDYATGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALVTGNSVVWKPAPSTPLTAIAVTKLVEEVLVANNVNPALCSLVCGEGDVGQA 250          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL7A1_DICDI (Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 9.453e-61
Identity = 112/224 (50.00%), Postives = 149/224 (66.52%), Query Frame = 1
Query:   28 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            EY FL+E+G+  E      NGKW   G  +  +NP NN+ IATV  A+ E+YE  ++A   A   W   PAP+RGE+VR IG A+REK+  L +L+S+EMGKI  E  GEVQE ID+CD+A GLSR +NG V+PSERPNH+++ETWNPLG+VG+ITAFNFPCAVLGWNA I+++CGN  +WKG            K++ +V   N +  A+     G G  +G+
Sbjct:    6 EYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNNKVIATVRGAAPEEYETCIQAMLAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCDYATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQLWKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGE 229          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22
Identity = 71/210 (33.81%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            F+NG+W     G  V   NPA+ N  +  V  ++ ED E  + A +EA   W +L   +RG+ + +  D + ++L  +    + EMGK LPE  GE    I +  +  G   +  G VIPS   + +M  T  PLGVVGVI+ +NFP A+  W    ALV GN VV K             K+++  FE   LP  +     G G+ +GQ
Sbjct:   13 FINGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTLPEAKGETARGIAILRYYAGEGMRKTGDVIPSTDKDALMFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIK---PATETAVTCAKIIA-CFEEAGLPAGVINLVTGPGSVVGQ 218          
The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 332
Match NameE-valueIdentityDescription
AL7B4_ARATH9.344e-10175.74Aldehyde dehydrogenase family 7 member B4 OS=Arabi... [more]
AL7A1_MALDO9.344e-10172.34Aldehyde dehydrogenase family 7 member A1 OS=Malus... [more]
AL7A1_BRANA3.674e-9774.79Aldehyde dehydrogenase family 7 member A1 OS=Brass... [more]
AL7A1_PEA1.145e-9070.35Aldehyde dehydrogenase family 7 member A1 OS=Pisum... [more]
AL7A1_BOVIN2.932e-7055.36Alpha-aminoadipic semialdehyde dehydrogenase OS=Bo... [more]
AL7A1_HUMAN3.829e-7055.36Alpha-aminoadipic semialdehyde dehydrogenase OS=Ho... [more]
AL7A1_MOUSE6.759e-6753.60Alpha-aminoadipic semialdehyde dehydrogenase OS=Mu... [more]
AL7A1_CAEEL5.355e-6453.13Putative aldehyde dehydrogenase family 7 member A1... [more]
AL7A1_DICDI9.453e-6150.00Putative aldehyde dehydrogenase family 7 member A1... [more]
ALDH1_BACSU1.334e-2233.81Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34108C07EF PostHarvP1 Citrus clementina cDNA clone C34108C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bp
GTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGAT
CGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGG
CACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATT
GCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGC
TTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAG
GGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAAAAACTGCATCAT
CTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAAT
TGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAA
GCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGTCCCAATCATATG
ATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATT
TAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCT
GCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACTCCTTTGATCACC
ATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAGGAACAAGTTACC
TGGTGCAATTTTTACCTCTTTTTGTGGTGGGGCTGAGATAGGTCAAGCAT
AGCGAAAGATCACGTATTCTCTGGTT
back to top