FC931726

Overview
NameFC931726
Unique NameFC931726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10327 contig Ccv1_Contig10327:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931726 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.035e-26
Identity = 66/148 (44.59%), Postives = 92/148 (62.16%), Query Frame = 3
Query:  285 MISSIKATVPTATINGSDSIFRKRLLSPTQRS---LFLPPLQVDSSSKSEFSLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQP------IEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSLCPWLAG 701
            M+ S+K T     ++    +FR+   S   RS   L  P  ++    ++  ++S+PLH+S+      +R +  +++C+AYEA++S+P          E KS AA+K+KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTS     AG
Sbjct:    1 MVLSVKQT-----LSPKIGLFRRNPSSSLGRSPVSLSFPSTELPK--RTVLAVSKPLHLSS-----SLRAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAG 136          

HSP 2 Score: 25.0238 bits (53), Expect = 3.035e-26
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  680 TLSLACGSLMMLI 718
            TLSLA GSLMMLI
Sbjct:  130 TLSLAAGSLMMLI 142          
BLAST of FC931726 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.510e-25
Identity = 66/139 (47.48%), Postives = 88/139 (63.31%), Query Frame = 3
Query:  285 MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLS-----RPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIER--EEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTS 680
            M+SSIK +  + +   S S+ R     PT+   F P L + +     F+ +     +PLHIS+ S F      K  +K +AYEA++S+P++   E     +AQK+KIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTS
Sbjct:    1 MLSSIKPSSSSFSTAISGSVRRS---IPTKLK-FSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF------KREVKVEAYEADRSRPLDINIELPDEQSAQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTS 129          

HSP 2 Score: 28.1054 bits (61), Expect = 5.510e-25
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  680 TLSLACGSLMMLI 718
            TLSLACGSLMML+
Sbjct:  130 TLSLACGSLMMLV 142          
The following BLAST results are available for this feature:
BLAST of FC931726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT1_ARATH3.035e-2644.59Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
GPT2_ARATH5.510e-2547.48Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
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Properties
Property NameValue
Genbank descriptionC34108C09EF PostHarvP1 Citrus clementina cDNA clone C34108C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931726 ID=FC931726; Name=FC931726; organism=Citrus clementina; type=EST; length=718bp
GGAAAGAAAAAAAAAAAAACTTTAATGCGTACAAATCACATGATCGCTTC
ATCGTGATTTTGGACTGAGGTTTCAGAGTAAAAATTCAATTTTTATTTAG
TAGATTTCGAAGCGAAATCTCTTCTTGTTCTTGTCTTCTCCAACGGAGAG
AAAAAAAAAAAACCACTAAAAAATTAAAATAATAAACAATCATTTTTTTT
ATATAAAAATCCCGTCTTTCTTCTCATCATTGTGAAAGTTTTGGTTTTGG
TTTTTGGTCTTGTGATCTTTTGCGAATTGTCAAAATGATTTCTTCTATCA
AAGCCACTGTACCAACAGCAACGATCAATGGGTCGGATTCAATTTTTCGA
AAGAGATTGCTTTCACCAACACAGCGATCTCTGTTTCTGCCACCATTACA
AGTGGACAGCAGTTCCAAATCTGAGTTTTCATTGTCTAGGCCTCTGCATA
TCTCGAACGTTTCATGCTTCGAGCCTGTGAGAGTTCAGAAATCCCTGATA
AAATGCAAGGCTTATGAGGCGGAACAGTCTCAGCCGATTGAAAGGGAAGA
AGCGAAATCAGCGGCGGCGCAGAAGGTCAAGATCGGTATATATTTTGCGA
CTTGGTGGGCTTTGAATGTTGTGTTTAATATATACAACAAGAAAGTCTTG
AATGCGTATCCCTATCCTTGGCTGACTTCACTCTGTCCCTGGCTTGCGGG
TCGTTGATGATGCTGATT
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