FC931727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 1.904e-55 Identity = 113/228 (49.56%), Postives = 149/228 (65.35%), Query Frame = 2 Query: 35 FNKMFSNSSISPPSTLTQE-----TPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD-MKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDI-AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 FN S ST+T+ + IS + C++ Q KQ+HSQ+I G+ NPT Q KL F CS G + YA K+ KIP P V +WN MIKG+S++D GV +YL+MLK V PD++TFPFLL G RD A+ GK+LHCHV+KFG S+++VQNAL+ Y LCG +DMARG+FD K+DV +WN M SGY R+K+++E+ +L EMER V PTSVT Sbjct: 11 FNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238 HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 60/217 (27.65%), Postives = 101/217 (46.54%), Query Frame = 2 Query: 140 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVD-------------------------------MARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 K++H +K GL +N VQN LV S G M A V + + VF WN MI GY+R+ ++ + + ++M ++ V P + T +L ++ + K +H +V + + S+ ++NAL++ Y CGE+D +AR FD D ++W M GY R F+E+ ++F EM+ G++P T Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMY-SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFT 370 HSP 3 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 43/158 (27.22%), Postives = 72/158 (45.57%), Query Frame = 2 Query: 224 EKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 E+G++K A ++P W MI GY R + ++ +M + + PD +T +L ++E G+ + ++ K + V V NALI Y CG + A+ +F + D TW AM G Q E K+F +M+ + P +T Sbjct: 314 ERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 66/197 (33.50%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 95 PLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFC--CSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 679 P++S +E C S+ +L Q+H IK ++ N ++L+ FC C E ++ YA V I PSV++WN+MI+GYS + ++ Y +ML+ PD +TFP++LK + ++FG +H V+K GF+ +++V L+ Y CGEV+ +F+ + +VV W ++ SG+ +F + + F EM+ GV Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV 204 HSP 2 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 230 GDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG-VLPTSVT 697 GD++ A + +P ++ WN++I GYS+ + + M+LDML + PD TF +++ + G+ +H +V K GF + AL++ Y G+ + A+ F+ K D + W + G +E +F M+ KG P +T Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421 HSP 3 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 50/194 (25.77%), Postives = 88/194 (45.36%), Query Frame = 2 Query: 146 IHSQTIKLGLLTNPTVQNKLVTF--CCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDS--------SVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 +H +K G N V L+ CC G++ Y +V IP+ +V W ++I G+ + + + + +M + V+ + LL R + GK H + GFD +V + +LI Y CG++ AR +FD + +V+WN++ +GY + +E +F +M G+ P VT Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCC---GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 77/216 (35.65%), Postives = 120/216 (55.56%), Query Frame = 2 Query: 56 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCC-SEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDML-KSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 S+ + P+T + + IS IE C S+ QLKQ H I+ G ++P +KL S ++YA KV +IP+P+ F WNT+I+ Y+ + +LDM+ +S P+ YTFPFL+K ++ G+ LH +K S VFV N+LI Y CG++D A +F + DVV+WN+M +G+ + D+ +LF +ME + V + VT Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234 HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 49/195 (25.13%), Postives = 94/195 (48.21%), Query Frame = 2 Query: 98 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682 LI S+ + +H +K + ++ V N L+ C GD+ ACKV I V WN+MI G+ + S + ++ M DV+ + T +L + +EFG+++ ++ + + ++ + NA++ Y CG ++ A+ +FD + D VTW M GY + ++ R++ M +K ++ Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI-HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330 HSP 3 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 51/207 (24.64%), Postives = 97/207 (46.86%), Query Frame = 2 Query: 80 LTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDM-LKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 LT ++ C S+ K++ + +T T+ L + SE D + A +VL +P+ + WN +I Y + ++++ ++ L+ +++ + T L + A+E G+ +H ++ K G + V +ALI Y CG+++ +R +F+ K DV W+AM G +E +F +M+ V P VT Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM---LDGYAISE--DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.271e-31 Identity = 72/205 (35.12%), Postives = 117/205 (57.07%), Query Frame = 2 Query: 95 PLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCC-SEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKS---DVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 PL+S +E C+ + LKQI +Q I GL+ +P ++L+ FC SE + Y+ K+L+ I P++F WN I+G+S ++ K L+Y ML+ + RPD++T+P L K G + HVLK + V NA I + CG+++ AR +FD S D+V+WN + +GYK++ + ++ ++ ME +GV P VT Sbjct: 55 PLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259 HSP 2 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 230 GDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682 GDM+ A KV + P + WN +I GY +I + + +Y M V+PD+ T L+ + + GKE + +V + G ++ + NAL+ + CG++ AR IFD K +V+W M SGY R D +RKLF +ME K V+ Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31 Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = 2 Query: 47 FSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKG--DMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682 F SS PP + P +S + C+++ L+ IH+Q IK+GL +KL+ FC + YA V + I P++ +WNTM +G++ + + +Y+ M+ + P++YTFPF+LK + A + G+++H HVLK G D ++V +LIS Y G ++ A +FD S DVV++ A+ GY + +KLF E+ K V+ Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232 HSP 2 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 2 Query: 221 SEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 + +G ++ A K+ +IP V WN MI GY+ ++K + ++ DM+K++VRPD T ++ + ++E G+++H + GF S++ + NALI Y CGE++ A G+F+ DV++WN + GY + + E LF EM R G P VT Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369 HSP 3 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 52/208 (25.00%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 89 ETPLISPIETCESMHQL---KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLK--FGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 E+ +++ + C + +Q+H G +N + N L+ S+ G+++ AC + ++P V WNT+I GY+ ++ +K +L++ +ML+S P++ T +L A++ G+ +H ++ K G ++ ++ +LI Y CG+++ A +F+ + +WNAM G+ + D + LF M + G+ P +T Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY-SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.057e-30 Identity = 67/190 (35.26%), Postives = 108/190 (56.84%), Query Frame = 2 Query: 119 CESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKS--DVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEM-ERKGV 679 C +M +LKQIH+ IK GL+++ ++++ FCC+ DM YA V +I + F+WNT+I+G+SR + + +++DML S V+P T+P + K + R G++LH V+K G + F++N ++ Y CG + A IF DVV WN+M G+ + D+ + LF EM +R GV Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224 HSP 2 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 52/184 (28.26%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 146 IHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 I + I LG++ V + ++ G + A + ++P+ + WN+MI G+ R K+ + M+ +M + DV+PD +T LL A E G+ +H ++++ F+ + V ALI YC CG ++ +F+ + K + WN+M G + LF E+ER G+ P SV+ Sbjct: 178 IEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29 Identity = 72/209 (34.45%), Postives = 116/209 (55.50%), Query Frame = 2 Query: 77 TLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSE--KGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 T+ + P++ I C S+ +L QI + IK + + + KL+ FC + M YA + + P + ++N+M +GYSR + +++++L+ + PDNYTFP LLK A+E G++LHC +K G D +V+V LI+ Y C +VD AR +FD + VV +NAM +GY R + +E LF EM+ K + P +T Sbjct: 26 TVNTQNPILL-ISKCNSLRELMQIQAYAIK-SHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232 HSP 2 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 53/200 (26.50%), Postives = 93/200 (46.50%), Query Frame = 2 Query: 98 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 L+ +++ + +Q+H ++KLGL N V L+ +E D+ A V +I P V +N MI GY+R + + ++ +M ++P+ T +L +++ GK +H + K F V V ALI + CG +D A IF+ D W+AM Y + +++ +F M + V P +T Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY-TECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 74/216 (34.26%), Postives = 121/216 (56.02%), Query Frame = 2 Query: 44 MFSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFD--VSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLP 685 +++NS I S S I++ QLKQIH++ + LGL + + KL+ S GD+ +A +V +PRP +F WN +I+GYSR + ++ +LMY +M + V PD++TFP LLK + ++ G+ +H V + GFD+ VFVQN LI+ Y C + AR +F+ + +V+W A+ S Y + + E ++F +M + V P Sbjct: 12 LYTNSGIHSDSFYA------SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220 HSP 2 Score: 103.99 bits (258), Expect = 8.075e-22 Identity = 63/203 (31.03%), Postives = 104/203 (51.23%), Query Frame = 2 Query: 98 LISPIETCESMHQLKQ---IHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 L+S + + LKQ IH+ +K+GL P + L T ++ G + A + K+ P++ LWN MI GY++ + + M+ +M+ DVRPD + + + ++E + ++ +V + + VF+ +ALI + CG V+ AR +FD + DVV W+AM GY + E L+ MER GV P VT Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY-AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426 HSP 3 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 57/223 (25.56%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 44 MFSNSSISPPSTLTQETPLISPIETCESMHQLKQ---IHSQTIKLGLLTNPTVQNKLVTFC--CSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 M+SN ++ S + P + ++ C + L+ +H+Q +LG + VQN L+ C G + + L +P ++ W ++ Y++ + ++ M K DV+PD +L FT ++ G+ +H V+K G + + +L + Y CG+V A+ +FD +++ WNAM SGY + E +F EM K V P +++ Sbjct: 106 MYSNMQLARVSPDSFTFPHL--LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL-PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28 Identity = 65/196 (33.16%), Postives = 105/196 (53.57%), Query Frame = 2 Query: 101 ISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD--MKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682 +S ++ C +LKQIH++ +K GL+ + K ++FC S + YA V RP FLWN MI+G+S D + +L+Y ML S + YTFP LLK + A E ++H + K G+++ V+ N+LI++Y + G +A +FD + D V+WN++ GY + + D LF +M K + Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213 HSP 2 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 2 Query: 230 GDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 G M A + RK+ + W TMI GY + D +K + ++ +M SDV PDN + L + A+E GK +H ++ K + LI Y CGE++ A +F K V W A+ SGY E F EM++ G+ P +T Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28 Identity = 69/196 (35.20%), Postives = 115/196 (58.67%), Query Frame = 2 Query: 125 SMHQLKQIHSQTIKLGL-LTNPTVQNKLVTFCCS--EKGDMKYACKVLRKIPRP-SVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSD-VRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697 S+ +L+QIH+ +I+ G+ +++ + L+ + S M YA KV KI +P +VF+WNT+I+GY+ I + + +Y +M S V PD +T+PFL+K T V G+ +H V++ GF S ++VQN+L+ Y CG+V A +FD + D+V WN++ +G+ + +E L+ EM KG+ P T Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224 HSP 2 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 61/215 (28.37%), Postives = 103/215 (47.91%), Query Frame = 2 Query: 56 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEME-RKGVLPTSVT 697 S + P T T LI + T + + IHS I+ G + VQN L+ + GD+ A KV K+P + WN++I G++ + + +Y +M ++PD +T LL + A+ GK +H +++K G ++ N L+ Y CG V+ A+ +FD + V+W ++ G E +LF ME +G+LP +T Sbjct: 114 SGLVEPDTHTYPF-LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN-CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326 The following BLAST results are available for this feature:
BLAST of FC931727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931727 ID=FC931727; Name=FC931727; organism=Citrus clementina; type=EST; length=699bpback to top |