FC931727

Overview
NameFC931727
Unique NameFC931727
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.904e-55
Identity = 113/228 (49.56%), Postives = 149/228 (65.35%), Query Frame = 2
Query:   35 FNKMFSNSSISPPSTLTQE-----TPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD-MKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDI-AVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            FN   S       ST+T+      +  IS +  C++  Q KQ+HSQ+I  G+  NPT Q KL  F CS  G  + YA K+  KIP P V +WN MIKG+S++D    GV +YL+MLK  V PD++TFPFLL G  RD  A+  GK+LHCHV+KFG  S+++VQNAL+  Y LCG +DMARG+FD   K+DV +WN M SGY R+K+++E+ +L  EMER  V PTSVT
Sbjct:   11 FNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238          

HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17
Identity = 60/217 (27.65%), Postives = 101/217 (46.54%), Query Frame = 2
Query:  140 KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVD-------------------------------MARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            K++H   +K GL +N  VQN LV    S  G M  A  V  +  +  VF WN MI GY+R+  ++  + + ++M ++ V P + T   +L   ++    +  K +H +V +   + S+ ++NAL++ Y  CGE+D                               +AR  FD     D ++W  M  GY R   F+E+ ++F EM+  G++P   T
Sbjct:  155 KKLHCHVVKFGLGSNLYVQNALVKMY-SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFT 370          

HSP 3 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 43/158 (27.22%), Postives = 72/158 (45.57%), Query Frame = 2
Query:  224 EKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            E+G++K A     ++P      W  MI GY R       + ++ +M  + + PD +T   +L       ++E G+ +  ++ K    + V V NALI  Y  CG  + A+ +F    + D  TW AM  G     Q  E  K+F +M+   + P  +T
Sbjct:  314 ERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 66/197 (33.50%), Postives = 113/197 (57.36%), Query Frame = 2
Query:   95 PLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFC--CSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGV 679
            P++S +E C S+ +L Q+H   IK  ++ N    ++L+ FC  C E  ++ YA  V   I  PSV++WN+MI+GYS   +    ++ Y +ML+    PD +TFP++LK  +    ++FG  +H  V+K GF+ +++V   L+  Y  CGEV+    +F+   + +VV W ++ SG+    +F +  + F EM+  GV
Sbjct:    8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV 204          

HSP 2 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 2
Query:  230 GDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKG-VLPTSVT 697
            GD++ A  +   +P  ++  WN++I GYS+    +  + M+LDML   + PD  TF  +++        + G+ +H +V K GF     +  AL++ Y   G+ + A+  F+   K D + W  +  G       +E   +F  M+ KG   P  +T
Sbjct:  265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421          

HSP 3 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 50/194 (25.77%), Postives = 88/194 (45.36%), Query Frame = 2
Query:  146 IHSQTIKLGLLTNPTVQNKLVTF--CCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDS--------SVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            +H   +K G   N  V   L+    CC   G++ Y  +V   IP+ +V  W ++I G+   +   + +  + +M  + V+ +      LL    R   +  GK  H  +   GFD         +V +  +LI  Y  CG++  AR +FD   +  +V+WN++ +GY +    +E   +F +M   G+ P  VT
Sbjct:  129 VHGFVVKTGFEVNMYVSTCLLHMYMCC---GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 77/216 (35.65%), Postives = 120/216 (55.56%), Query Frame = 2
Query:   56 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCC-SEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDML-KSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            S+ + P+T  + +  IS IE C S+ QLKQ H   I+ G  ++P   +KL      S    ++YA KV  +IP+P+ F WNT+I+ Y+        +  +LDM+ +S   P+ YTFPFL+K      ++  G+ LH   +K    S VFV N+LI  Y  CG++D A  +F    + DVV+WN+M +G+ +    D+  +LF +ME + V  + VT
Sbjct:   19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234          

HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17
Identity = 49/195 (25.13%), Postives = 94/195 (48.21%), Query Frame = 2
Query:   98 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682
            LI       S+   + +H   +K  + ++  V N L+  C    GD+  ACKV   I    V  WN+MI G+ +  S    + ++  M   DV+  + T   +L    +   +EFG+++  ++ +   + ++ + NA++  Y  CG ++ A+ +FD   + D VTW  M  GY   + ++  R++   M +K ++
Sbjct:  137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI-HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330          

HSP 3 Score: 75.0998 bits (183), Expect = 4.017e-13
Identity = 51/207 (24.64%), Postives = 97/207 (46.86%), Query Frame = 2
Query:   80 LTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDM-LKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            LT    ++     C S+   K++     +   +T  T+   L  +  SE  D + A +VL  +P+  +  WN +I  Y +       ++++ ++ L+ +++ +  T    L    +  A+E G+ +H ++ K G   +  V +ALI  Y  CG+++ +R +F+   K DV  W+AM  G       +E   +F +M+   V P  VT
Sbjct:  267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM---LDGYAISE--DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.271e-31
Identity = 72/205 (35.12%), Postives = 117/205 (57.07%), Query Frame = 2
Query:   95 PLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCC-SEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKS---DVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            PL+S +E C+ +  LKQI +Q I  GL+ +P   ++L+ FC  SE   + Y+ K+L+ I  P++F WN  I+G+S  ++ K   L+Y  ML+    + RPD++T+P L K          G  +  HVLK   +    V NA I  +  CG+++ AR +FD S   D+V+WN + +GYK++ + ++   ++  ME +GV P  VT
Sbjct:   55 PLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259          

HSP 2 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 2
Query:  230 GDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682
            GDM+ A KV  + P   +  WN +I GY +I   +  + +Y  M    V+PD+ T   L+   +    +  GKE + +V + G   ++ + NAL+  +  CG++  AR IFD   K  +V+W  M SGY R    D +RKLF +ME K V+
Sbjct:  205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31
Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   47 FSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKG--DMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682
            F  SS  PP    +  P +S +  C+++  L+ IH+Q IK+GL       +KL+ FC        + YA  V + I  P++ +WNTM +G++      + + +Y+ M+   + P++YTFPF+LK   +  A + G+++H HVLK G D  ++V  +LIS Y   G ++ A  +FD S   DVV++ A+  GY      +  +KLF E+  K V+
Sbjct:   19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232          

HSP 2 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  221 SEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            + +G ++ A K+  +IP   V  WN MI GY+   ++K  + ++ DM+K++VRPD  T   ++    +  ++E G+++H  +   GF S++ + NALI  Y  CGE++ A G+F+     DV++WN +  GY  +  + E   LF EM R G  P  VT
Sbjct:  211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369          

HSP 3 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 52/208 (25.00%), Postives = 107/208 (51.44%), Query Frame = 2
Query:   89 ETPLISPIETCESMHQL---KQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLK--FGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            E+ +++ +  C     +   +Q+H      G  +N  + N L+    S+ G+++ AC +  ++P   V  WNT+I GY+ ++ +K  +L++ +ML+S   P++ T   +L       A++ G+ +H ++ K   G  ++  ++ +LI  Y  CG+++ A  +F+      + +WNAM  G+    + D +  LF  M + G+ P  +T
Sbjct:  266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY-SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.057e-30
Identity = 67/190 (35.26%), Postives = 108/190 (56.84%), Query Frame = 2
Query:  119 CESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKS--DVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEM-ERKGV 679
            C +M +LKQIH+  IK GL+++    ++++ FCC+   DM YA  V  +I   + F+WNT+I+G+SR    +  + +++DML S   V+P   T+P + K + R      G++LH  V+K G +   F++N ++  Y  CG +  A  IF      DVV WN+M  G+ +    D+ + LF EM +R GV
Sbjct:   35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224          

HSP 2 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 52/184 (28.26%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  146 IHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            I +  I LG++    V    +    ++ G +  A  +  ++P+ +   WN+MI G+ R    K+ + M+ +M + DV+PD +T   LL       A E G+ +H ++++  F+ +  V  ALI  YC CG ++    +F+ + K  +  WN+M  G       +    LF E+ER G+ P SV+
Sbjct:  178 IEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29
Identity = 72/209 (34.45%), Postives = 116/209 (55.50%), Query Frame = 2
Query:   77 TLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSE--KGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            T+  + P++  I  C S+ +L QI +  IK   + + +   KL+ FC     +  M YA  +   +  P + ++N+M +GYSR  +      +++++L+  + PDNYTFP LLK      A+E G++LHC  +K G D +V+V   LI+ Y  C +VD AR +FD   +  VV +NAM +GY R  + +E   LF EM+ K + P  +T
Sbjct:   26 TVNTQNPILL-ISKCNSLRELMQIQAYAIK-SHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232          

HSP 2 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 53/200 (26.50%), Postives = 93/200 (46.50%), Query Frame = 2
Query:   98 LISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            L+      +++ + +Q+H  ++KLGL  N  V   L+    +E  D+  A  V  +I  P V  +N MI GY+R +     + ++ +M    ++P+  T   +L       +++ GK +H +  K  F   V V  ALI  +  CG +D A  IF+     D   W+AM   Y    + +++  +F  M  + V P  +T
Sbjct:  135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY-TECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29
Identity = 74/216 (34.26%), Postives = 121/216 (56.02%), Query Frame = 2
Query:   44 MFSNSSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFD--VSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLP 685
            +++NS I   S         S I++     QLKQIH++ + LGL  +  +  KL+    S  GD+ +A +V   +PRP +F WN +I+GYSR +  ++ +LMY +M  + V PD++TFP LLK  +    ++ G+ +H  V + GFD+ VFVQN LI+ Y  C  +  AR +F+     +  +V+W A+ S Y +  +  E  ++F +M +  V P
Sbjct:   12 LYTNSGIHSDSFYA------SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220          

HSP 2 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 63/203 (31.03%), Postives = 104/203 (51.23%), Query Frame = 2
Query:   98 LISPIETCESMHQLKQ---IHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            L+S +     +  LKQ   IH+  +K+GL   P +   L T   ++ G +  A  +  K+  P++ LWN MI GY++    +  + M+ +M+  DVRPD  +    +    +  ++E  + ++ +V +  +   VF+ +ALI  +  CG V+ AR +FD +   DVV W+AM  GY    +  E   L+  MER GV P  VT
Sbjct:  225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY-AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426          

HSP 3 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 57/223 (25.56%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   44 MFSNSSISPPSTLTQETPLISPIETCESMHQLKQ---IHSQTIKLGLLTNPTVQNKLVTFC--CSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            M+SN  ++  S  +   P +  ++ C  +  L+    +H+Q  +LG   +  VQN L+     C   G  +   + L  +P  ++  W  ++  Y++       + ++  M K DV+PD      +L  FT    ++ G+ +H  V+K G +    +  +L + Y  CG+V  A+ +FD     +++ WNAM SGY +     E   +F EM  K V P +++
Sbjct:  106 MYSNMQLARVSPDSFTFPHL--LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL-PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28
Identity = 65/196 (33.16%), Postives = 105/196 (53.57%), Query Frame = 2
Query:  101 ISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGD--MKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVL 682
            +S ++ C    +LKQIH++ +K GL+ +     K ++FC S      + YA  V     RP  FLWN MI+G+S  D  +  +L+Y  ML S    + YTFP LLK  +   A E   ++H  + K G+++ V+  N+LI++Y + G   +A  +FD   + D V+WN++  GY +  + D    LF +M  K  +
Sbjct:   18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213          

HSP 2 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 2
Query:  230 GDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            G M  A  + RK+   +   W TMI GY + D +K  + ++ +M  SDV PDN +    L    +  A+E GK +H ++ K        +   LI  Y  CGE++ A  +F    K  V  W A+ SGY       E    F EM++ G+ P  +T
Sbjct:  195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350          
BLAST of FC931727 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28
Identity = 69/196 (35.20%), Postives = 115/196 (58.67%), Query Frame = 2
Query:  125 SMHQLKQIHSQTIKLGL-LTNPTVQNKLVTFCCS--EKGDMKYACKVLRKIPRP-SVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSD-VRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEMERKGVLPTSVT 697
            S+ +L+QIH+ +I+ G+ +++  +   L+ +  S      M YA KV  KI +P +VF+WNT+I+GY+ I +  +   +Y +M  S  V PD +T+PFL+K  T    V  G+ +H  V++ GF S ++VQN+L+  Y  CG+V  A  +FD   + D+V WN++ +G+    + +E   L+ EM  KG+ P   T
Sbjct:   29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224          

HSP 2 Score: 94.7449 bits (234), Expect = 4.899e-19
Identity = 61/215 (28.37%), Postives = 103/215 (47.91%), Query Frame = 2
Query:   56 SSISPPSTLTQETPLISPIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYACKVLRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFLLKGFTRDIAVEFGKELHCHVLKFGFDSSVFVQNALISTYCLCGEVDMARGIFDVSYKDDVVTWNAMFSGYKRVKQFDETRKLFGEME-RKGVLPTSVT 697
            S +  P T T    LI  + T   +   + IHS  I+ G  +   VQN L+    +  GD+  A KV  K+P   +  WN++I G++     +  + +Y +M    ++PD +T   LL    +  A+  GK +H +++K G   ++   N L+  Y  CG V+ A+ +FD     + V+W ++  G        E  +LF  ME  +G+LP  +T
Sbjct:  114 SGLVEPDTHTYPF-LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN-CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326          
The following BLAST results are available for this feature:
BLAST of FC931727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 209
Match NameE-valueIdentityDescription
PP235_ARATH1.904e-5549.56Putative pentatricopeptide repeat-containing prote... [more]
PP214_ARATH8.608e-3233.50Putative pentatricopeptide repeat-containing prote... [more]
PP175_ARATH1.124e-3135.65Pentatricopeptide repeat-containing protein At2g29... [more]
PP169_ARATH3.271e-3135.12Pentatricopeptide repeat-containing protein At2g22... [more]
PPR21_ARATH7.287e-3133.18Pentatricopeptide repeat-containing protein At1g08... [more]
PP200_ARATH8.057e-3035.26Pentatricopeptide repeat-containing protein At2g42... [more]
PP145_ARATH3.061e-2934.45Pentatricopeptide repeat-containing protein At2g02... [more]
PP224_ARATH8.908e-2934.26Pentatricopeptide repeat-containing protein At3g12... [more]
PP449_ARATH7.541e-2833.16Pentatricopeptide repeat-containing protein At5g66... [more]
PP330_ARATH7.541e-2835.20Pentatricopeptide repeat-containing protein At4g21... [more]

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Properties
Property NameValue
Genbank descriptionC34108C10EF PostHarvP1 Citrus clementina cDNA clone C34108C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931727 ID=FC931727; Name=FC931727; organism=Citrus clementina; type=EST; length=699bp
GAGAACTCACGTTCTCAAGAAAACCCCAATAATATTCAACAAAATGTTTT
CTAATTCTTCTATATCACCACCATCTACACTCACCCAAGAAACCCCACTC
ATCTCTCCGATTGAAACCTGCGAATCCATGCACCAACTTAAGCAAATCCA
CTCTCAAACTATCAAACTTGGACTTTTAACAAACCCCACTGTACAAAACA
AACTCGTTACCTTTTGTTGTAGTGAAAAAGGTGACATGAAGTATGCGTGT
AAAGTGCTCAGGAAAATTCCCCGACCAAGTGTGTTTCTTTGGAACACTAT
GATCAAGGGTTATTCTAGGATTGATTCTCATAAAAACGGAGTTTTGATGT
ATTTGGATATGTTGAAGAGTGATGTCAGGCCTGATAACTATACATTTCCG
TTCTTGTTGAAGGGTTTTACGCGTGACATTGCTGTGGAGTTTGGTAAGGA
GTTGCATTGTCATGTGCTGAAATTTGGGTTTGATTCTAGTGTGTTTGTGC
AAAATGCGTTGATTAGTACGTATTGTTTGTGTGGGGAAGTTGACATGGCT
CGTGGGATATTTGATGTGAGTTATAAAGATGATGTGGTTACTTGGAATGC
GATGTTTTCCGGGTATAAGAGAGTGAAGCAATTTGATGAAACTAGGAAGC
TTTTTGGTGAGATGGAGAGGAAAGGAGTGTTGCCCACTTCAGTTACCAT
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