FC931733

Overview
NameFC931733
Unique NameFC931733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11279 contig Ccv1_Contig11279:876..1547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 8.306e-114
Identity = 205/223 (91.93%), Postives = 217/223 (97.31%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            VTVPAYFNDSQRTATKDAGRIAGL+VLRIINEPTAASLAYGFE+KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR+VDWLA +FKRDEGIDLLKDKQALQRLTETAE+AKMELSSL+QTNISLPFITATADGPKHI+TTLTR KFEELCSDLLDRL+TPVE SLRDAKLS KD+DEVILVGGSTRIPAVQELVKK+ G++ NVTVNP
Sbjct:  206 VTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLSQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLRTPVENSLRDAKLSIKDIDEVILVGGSTRIPAVQELVKKLIGKDPNVTVNP 428
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: HSP7S_SPIOL (Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia oleracea GN=CHSP70 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.850e-113
Identity = 209/223 (93.72%), Postives = 215/223 (96.41%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            VTVPAYFNDSQRTATKDAGRIAGL+VLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAS+FKRDEGIDLLKDKQALQRLTETAE+AKMELSSLTQ NISLPFITATADGPKHI+TTLTR KFEEL SDLLDRL+TPVE SLRDAKLSF DLDEVILVGGSTRIPAV ELVKKMTG+  NVTVNP
Sbjct:   86 VTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASSFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELWSDLLDRLRTPVENSLRDAKLSFSDLDEVILVGGSTRIPAVIELVKKMTGKAPNVTVNP 308
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.521e-99
Identity = 177/223 (79.37%), Postives = 204/223 (91.48%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAG++V+RIINEPTAASLAYGF+KK+NETILVFDLGGGTFDVSVLEVGDGVFEVL+TSGDTHLGGDDFDK+IVD+LA  F++DEGIDL KDKQALQRLTE AE+AK+ELSS+TQ  I+LPFITAT DGPKH+D TLTR KFEELC+DL+DR + PVE +LRDAKL  +++DEV+LVGGSTRIPAVQ+LVK + GRE N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGIEVMRIINEPTAASLAYGFDKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAEQFRKDEGIDLRKDKQALQRLTEAAEKAKIELSSVTQAEINLPFITATQDGPKHLDMTLTRAKFEELCADLIDRCRIPVEQALRDAKLKKENIDEVVLVGGSTRIPAVQQLVKNLLGREPNQTVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CYAME (Chaperone protein dnaK OS=Cyanidioschyzon merolae GN=dnaK PE=3 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.141e-97
Identity = 173/223 (77.58%), Postives = 203/223 (91.03%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASLAYG +KK+NE ILVFDLGGGTFDVS+LE+GDGVFEVL+TSGDTHLGGDDFDK+IVDWL  N+KR EGIDL KDKQALQRLTE AE+AK+ELS++TQT+I+LPFITATADGPKH+D TLTR +FE+L SDL++R + PVE +L DAKLS +D+DEV+LVGGSTRIPAVQ+LVK + G++ N +VNP
Sbjct:  140 ITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLAYGLDKKSNEKILVFDLGGGTFDVSILEIGDGVFEVLATSGDTHLGGDDFDKKIVDWLIDNWKRIEGIDLSKDKQALQRLTEAAEKAKIELSNVTQTDINLPFITATADGPKHLDQTLTRAQFEQLTSDLIERCRKPVEQALTDAKLSKQDIDEVVLVGGSTRIPAVQQLVKDLLGKQPNQSVNP 362
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.141e-97
Identity = 173/223 (77.58%), Postives = 201/223 (90.13%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK NETILVFDLGGGTFDVS+LEVGDGVFEVL+TSGDTHLGGDDFDK+IVD+LA +F+  EGIDL KD+QALQRLTE AE+AK+ELSS+ QT I+LPFITAT DGPKH+D TLTR KFEELCSDL+DR + PVE +L+DAKLS   +DEV+LVGGSTRIPA+QELVK++ G++ N +VNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKANETILVFDLGGGTFDVSILEVGDGVFEVLATSGDTHLGGDDFDKKIVDYLAESFRAQEGIDLRKDRQALQRLTEAAEKAKIELSSVMQTEINLPFITATQDGPKHLDMTLTRAKFEELCSDLIDRCRVPVEQALKDAKLSKDQIDEVVLVGGSTRIPAIQELVKRLLGKDPNQSVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNE7 (Chaperone protein dnaK2 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK2 PE=3 SV=2)

HSP 1 Score: 352.829 bits (904), Expect = 9.226e-97
Identity = 172/223 (77.13%), Postives = 202/223 (90.58%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVL+TSGDTHLGGDDFDK+IVD+LA  F+++EGIDL KDKQALQRLTE AE+AK+ELSS TQT I+LPFITAT DGPKH+D TLTR KFEEL SDL+DR + PVE +++DAKL+  ++DE++LVGGSTRIPAVQ +VK+MTG+E N +VNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAGEFQKNEGIDLRKDKQALQRLTEAAEKAKIELSSATQTEINLPFITATQDGPKHLDLTLTRAKFEELASDLIDRCRIPVEQAIKDAKLALSEIDEIVLVGGSTRIPAVQAIVKQMTGKEPNQSVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNP6 (Chaperone protein dnaK 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 4.579e-96
Identity = 171/223 (76.68%), Postives = 201/223 (90.13%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            + VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVL+TSGDTHLGGDDFDK+IVD+LA  F+++EGIDL KDKQALQRLTE AE+AK+ELSS TQT I+LPFITAT DGPKH+D TLTR KFEEL SDL+DR + PVE +++DAKL+  ++DE++LVGGSTRIPAVQ +VK+MTG+E N +VNP
Sbjct:  139 IPVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAGEFQKNEGIDLRKDKQALQRLTEAAEKAKIELSSATQTEINLPFITATQDGPKHLDLTLTRAKFEELASDLIDRCRIPVEQAIKDAKLALSEIDEIVLVGGSTRIPAVQAIVKQMTGKEPNQSVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 2.968e-95
Identity = 169/223 (75.78%), Postives = 200/223 (89.69%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAG++VLRIINEPTAASLAYG +KK+NETILVFDLGGGTFDVS+LEVG+GVFEVL+TSGDTHLGGDDFDK+IVD+LA  F++ EGIDL KDKQALQRLTE AE+AK+ELS ++QT I+LPFITAT DGPKH+DTTL+R KFEE+CSDL+DR   PVE ++RDAK+    LDE++LVGGSTRIPAVQE+VKK+ G++ N  VNP
Sbjct:  140 ITVPAYFNDSQRQATKDAGKIAGIEVLRIINEPTAASLAYGLDKKDNETILVFDLGGGTFDVSILEVGEGVFEVLATSGDTHLGGDDFDKKIVDFLAGEFQKAEGIDLRKDKQALQRLTEAAEKAKIELSGVSQTEINLPFITATQDGPKHLDTTLSRAKFEEICSDLIDRCGIPVENAIRDAKIDKSALDEIVLVGGSTRIPAVQEVVKKILGKDPNQGVNP 362
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PORYE (Chaperone protein dnaK OS=Porphyra yezoensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 5.063e-95
Identity = 167/223 (74.89%), Postives = 201/223 (90.13%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK++EGIDL KD+QALQRLTE AE+AK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS+L+D+   PV  +L+DAKL    +DEV+LVGGSTRIPA+Q++VK++ G++ N +VNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQNEGIDLGKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRGKFEELCSNLIDKCSIPVNNALKDAKLEASSIDEVVLVGGSTRIPAIQQMVKRLIGKDPNQSVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PORHA (Chaperone protein dnaK OS=Porphyra haitanensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 8.635e-95
Identity = 166/223 (74.44%), Postives = 200/223 (89.69%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAA L+YG +K+NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK++EGIDL KD+QALQRLTE AE+AK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS+L+D+   PV  +L+DAKL    +DEV+LVGGSTRIPA+Q++VK++ G++ N +VNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAPLSYGLDKQNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQNEGIDLAKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRGKFEELCSNLIDKCSIPVNNALKDAKLEASSIDEVVLVGGSTRIPAIQQMVKRLIGKDPNQSVNP 361
The following BLAST results are available for this feature:
BLAST of FC931733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7S_PEA8.306e-11491.93Stromal 70 kDa heat shock-related protein, chlorop... [more]
HSP7S_SPIOL1.850e-11393.72Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK2_ANASP1.521e-9979.37Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK_CYAME4.141e-9777.58Chaperone protein dnaK OS=Cyanidioschyzon merolae ... [more]
DNAK2_THEEB4.141e-9777.58Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK2_SYNE79.226e-9777.13Chaperone protein dnaK2 OS=Synechococcus elongatus... [more]
DNAK2_SYNP64.579e-9676.68Chaperone protein dnaK 2 OS=Synechococcus sp. (str... [more]
DNAK2_SYNY32.968e-9575.78Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_PORYE5.063e-9574.89Chaperone protein dnaK OS=Porphyra yezoensis GN=dn... [more]
DNAK_PORHA8.635e-9574.44Chaperone protein dnaK OS=Porphyra haitanensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34108D05EF PostHarvP1 Citrus clementina cDNA clone C34108D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931733 ID=FC931733; Name=FC931733; organism=Citrus clementina; type=EST; length=672bp
GGTCACAGTGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGG
ATGCTGGTCGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCT
ACTGCTGCTTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCAT
CCTAGTGTTTGACCTTGGTGGTGGTACTTTTGATGTTTCAGTCCTTGAGG
TCGGTGATGGAGTGTTTGAAGTGCTCTCCACCTCAGGCGATACGCATTTG
GGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTTCAAACTT
CAAGAGAGATGAAGGCATAGATCTTTTGAAGGACAAACAAGCTCTTCAGC
GTCTAACTGAGACGGCTGAGGAGGCTAAGATGGAGCTGTCATCTTTGACT
CAAACAAACATCAGCTTGCCTTTCATTACTGCTACTGCAGATGGGCCGAA
GCATATTGACACCACCCTTACGAGGGTTAAGTTTGAGGAATTGTGTTCAG
ACCTACTGGACAGGCTCAAGACGCCTGTTGAAACTTCTTTGCGGGATGCA
AAACTTTCCTTCAAGGATCTTGATGAGGTTATTCTTGTTGGTGGATCAAC
ACGTATTCCAGCTGTTCAGGAGCTGGTGAAGAAGATGACTGGAAGGGAAA
CCAATGTTACAGTCAATCCTGA
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