FC931741

Overview
NameFC931741
Unique NameFC931741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length440
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15384 contig Ccv1_Contig15384:1..440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_SPIOL (Ribose-phosphate pyrophosphokinase 1 OS=Spinacia oleracea GN=PRS1 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 6.337e-75
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQLQESVRGCDV+LVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGA+RVLACDLHSGQSMGYFDIPVDHVY QPVILDYLASKT  S+DLVVVSPDVGGVARARAF
Sbjct:   58 ADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAF 203
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_ARATH (Ribose-phosphate pyrophosphokinase 1 OS=Arabidopsis thaliana GN=PRS1 PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 1.844e-74
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQLQESVRGCDVYLVQPTC P NENLMELLIM+DACRRASAK +TAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASK+  S DLVVVSPDVGGVARARAF
Sbjct:  125 ADGEIYVQLQESVRGCDVYLVQPTCTPTNENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKSIPSEDLVVVSPDVGGVARARAF 270
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS2_ARATH (Ribose-phosphate pyrophosphokinase 2 OS=Arabidopsis thaliana GN=PRS2 PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 4.108e-74
Identity = 136/146 (93.15%), Postives = 141/146 (96.58%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQL+ESVRGCDV+LVQPTC P NENLMELLIM+DACRRASAK +TAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASK+ SS DLVVVSPDVGGVARARAF
Sbjct:  122 ADGEIYVQLKESVRGCDVFLVQPTCTPTNENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKSISSEDLVVVSPDVGGVARARAF 267
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS5_ARATH (Ribose-phosphate pyrophosphokinase 5 OS=Arabidopsis thaliana GN=PRS5 PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 7.007e-74
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQLQESVRGCDV+LVQPTCPPANENLMELL+MIDACRRASAK ITAVIPYFGYARADRKTQGRESIAAKLVANLIT++GADRVLACDLHSGQSMGYFDIPVDHVY QPVILDYLASK  SS DLVVVSPDVGGVARARAF
Sbjct:  110 ADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKTITAVIPYFGYARADRKTQGRESIAAKLVANLITQSGADRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKAISSEDLVVVSPDVGGVARARAF 255
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS2_SPIOL (Ribose-phosphate pyrophosphokinase 2, chloroplastic OS=Spinacia oleracea GN=PRS2 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 7.007e-74
Identity = 136/146 (93.15%), Postives = 143/146 (97.95%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQL+ESVRGCDV+++QPT PPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGA+RVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASK  +S+DLVVVSPDVGGVARARAF
Sbjct:  117 ADGEIYVQLEESVRGCDVFIIQPTSPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKGIASSDLVVVSPDVGGVARARAF 262
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_ORYSJ (Ribose-phosphate pyrophosphokinase 1 OS=Oryza sativa subsp. japonica GN=Os02g0127700 PE=2 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 1.012e-72
Identity = 135/146 (92.47%), Postives = 141/146 (96.58%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQLQESVRGCDV+LVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK+QGRESIAAKLVAN+ITEAGA+RVL CDLHS Q+MGYFDIPVDHVY QPVILDYLASKT  S+DLVVVSPDVGGVARARAF
Sbjct:  112 ADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKSQGRESIAAKLVANMITEAGANRVLVCDLHSSQAMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAF 257
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS2_ORYSJ (Ribose-phosphate pyrophosphokinase 2 OS=Oryza sativa subsp. japonica GN=Os06g0617800 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 2.259e-64
Identity = 119/146 (81.51%), Postives = 132/146 (90.41%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGEIYVQLQESVRGCDV+LVQPTC P NENLMEL +MIDACRRASA++IT VIPYFGYARADRK QGRE+I AKL ANL+TEAG+DRV+ CD+HS Q++GYFDIPVDH++ QPVILDYLASKT  S DLVVVSPDVGGV RARAF
Sbjct:  122 ADGEIYVQLQESVRGCDVFLVQPTCSPVNENLMELFVMIDACRRASARSITVVIPYFGYARADRKAQGREAITAKLSANLLTEAGSDRVIVCDIHSTQALGYFDIPVDHIHGQPVILDYLASKTI-SKDLVVVSPDVGGVVRARAF 266
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_SYNE7 (Ribose-phosphate pyrophosphokinase OS=Synechococcus elongatus (strain PCC 7942) GN=prs PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.802e-61
Identity = 115/146 (78.77%), Postives = 129/146 (88.36%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGE+YVQ+QES+RGCDVYL+QPTC P N++LMELLIMIDACRRASA+ ITAV+PY+GYARADRKT GRESI AKLVANLIT+AGA+RVLA DLHS Q  GYFDIP DHVY  PV++DYL SK  +  DLVVVSPDVGGVARARAF
Sbjct:   54 ADGELYVQIQESIRGCDVYLMQPTCWPVNDHLMELLIMIDACRRASARQITAVLPYYGYARADRKTAGRESITAKLVANLITQAGANRVLAMDLHSAQIQGYFDIPFDHVYGSPVLIDYLRSKNLA--DLVVVSPDVGGVARARAF 197
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_ANASP (Ribose-phosphate pyrophosphokinase OS=Anabaena sp. (strain PCC 7120) GN=prs PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.979e-60
Identity = 112/146 (76.71%), Postives = 128/146 (87.67%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGE+YVQ+QES+RGCDVYL+QP C P N++LMELLIM+DACRRASA+ +TAVIPY+GYARADRKT GRESI AKLVANLIT+AGA+RVLA DLH+ Q  GYFDIP DHVY  PV+LDYL SK    +D+VVVSPDVGGVARARAF
Sbjct:   54 ADGELYVQIQESIRGCDVYLIQPCCQPVNDHLMELLIMVDACRRASARQVTAVIPYYGYARADRKTAGRESITAKLVANLITQAGANRVLAMDLHAAQIQGYFDIPFDHVYGSPVLLDYLTSK--QLHDIVVVSPDVGGVARARAF 197
[Close]
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_SYNY3 (Ribose-phosphate pyrophosphokinase OS=Synechocystis sp. (strain PCC 6803) GN=prs PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.875e-59
Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 1 
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARAF 438
            ADGE+Y+Q+QES+RG DVYL+QP C P N+NLMELLIMIDACRRASA+ ITAV+PY+GYARADRKT GRESI+AKLVANLIT AGA RVLA DLHS Q  GYFDIP DH+Y  PVI+DYL SK  +  DLVVVSPDVGGVARARAF
Sbjct:   57 ADGELYIQIQESIRGGDVYLIQPCCHPVNDNLMELLIMIDACRRASARQITAVLPYYGYARADRKTAGRESISAKLVANLITGAGAQRVLAMDLHSAQIQGYFDIPCDHMYGSPVIIDYLKSKQLT--DLVVVSPDVGGVARARAF 200
The following BLAST results are available for this feature:
BLAST of FC931741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
KPRS1_SPIOL6.337e-7595.89Ribose-phosphate pyrophosphokinase 1 OS=Spinacia o... [more]
KPRS1_ARATH1.844e-7493.84Ribose-phosphate pyrophosphokinase 1 OS=Arabidopsi... [more]
KPRS2_ARATH4.108e-7493.15Ribose-phosphate pyrophosphokinase 2 OS=Arabidopsi... [more]
KPRS5_ARATH7.007e-7493.84Ribose-phosphate pyrophosphokinase 5 OS=Arabidopsi... [more]
KPRS2_SPIOL7.007e-7493.15Ribose-phosphate pyrophosphokinase 2, chloroplasti... [more]
KPRS1_ORYSJ1.012e-7292.47Ribose-phosphate pyrophosphokinase 1 OS=Oryza sati... [more]
KPRS2_ORYSJ2.259e-6481.51Ribose-phosphate pyrophosphokinase 2 OS=Oryza sati... [more]
KPRS_SYNE76.802e-6178.77Ribose-phosphate pyrophosphokinase OS=Synechococcu... [more]
KPRS_ANASP1.979e-6076.71Ribose-phosphate pyrophosphokinase OS=Anabaena sp.... [more]
KPRS_SYNY34.875e-5977.40Ribose-phosphate pyrophosphokinase OS=Synechocysti... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34108E01EF PostHarvP1 Citrus clementina cDNA clone C34108E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931741 ID=FC931741; Name=FC931741; organism=Citrus clementina; type=EST; length=440bp
GCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGA
TGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGG
AGCTTTTGATAATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATC
ACAGCTGTGATTCCTTACTTTGGATATGCTAGAGCTGACAGAAAGACTCA
AGGGCGAGAATCAATTGCTGCCAAACTCGTCGCAAACCTTATAACAGAGG
CAGGTGCTGACCGTGTTCTTGCTTGCGATCTTCACTCAGGGCAATCCATG
GGTTACTTTGATATTCCAGTGGACCATGTATACTGTCAGCCTGTGATTCT
TGATTACCTTGCTAGCAAGACGGNTTCTTCTAATGATTTGGTGGTGGTTT
CACCTGATGTCGGTGGAGTGGCAAGAGCACGTGCTTTTGC
back to top