FC931746

Overview
NameFC931746
Unique NameFC931746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 1.603e-102
Identity = 197/244 (80.74%), Postives = 197/244 (80.74%), Query Frame = 2
Query:  107 MAAMTSTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDP----------------------------------------------NIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            MAAM STAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDP                                              NIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.331e-77
Identity = 148/221 (66.97%), Postives = 163/221 (73.76%), Query Frame = 2
Query:  173 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDP---------------------------------------------NIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDP                                             ++Q+AIIEQSVSPGGGAWLGGQLFS MVVRKPAH+FLDELGI+YDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVCYELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 240          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.113e-70
Identity = 146/245 (59.59%), Postives = 168/245 (68.57%), Query Frame = 2
Query:  107 MAAMTSTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDP----------------------------------------------NIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            MAA+ ST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDP                                              N+Q+AIIEQSVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDEQD YVV+KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG RVGGVVTNWALV+ NH TQSCMDPNVMEAK+VVSSCGHDGPF
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 237          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.124e-66
Identity = 124/148 (83.78%), Postives = 134/148 (90.54%), Query Frame = 2
Query:  257 SASASPPYDLNTFKFDPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            SA  S  Y+L+    DP + IAI+EQSVSPGGGAWLGGQLFSAMVVRKPAH+FLDELG+ YDE ++YVVIKHAALFTST+MS LLARPNVKLFNAVA EDLIV+GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF
Sbjct:   99 SAGLSCAYELSK---DPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 243          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.047e-65
Identity = 120/148 (81.08%), Postives = 134/148 (90.54%), Query Frame = 2
Query:  257 SASASPPYDLNTFKFDPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            SA  S  Y+L+    DP + +AI+EQSVSPGGGAWLGGQLFSAMVVR+PAH+FLDELG+ YDE ++YVV+KHAALFTST+MS+LLARPNVKLFNAVA EDLIV+ GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF
Sbjct:   96 SAGLSCAYELSK---DPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 240          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.860e-50
Identity = 98/153 (64.05%), Postives = 122/153 (79.74%), Query Frame = 2
Query:  257 SASASPPYDLNTFKFDPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-----RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            SA  +  Y + T +  P+++IAIIE SV+PGGGAWLGGQLFSAMVVRKPA +FL+E+G+ Y+++ +YVV+KHAALFTST+M++ LA PNVKLFNA A EDLIVK G     R+ GVVTNW LVS+NH  QSCMDPN + A +VVS+ GHDGPF
Sbjct:   86 SAGLTAAYYIGTRR--PDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPF 236          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 90/135 (66.67%), Postives = 111/135 (82.22%), Query Frame = 2
Query:  305 PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 697
            P+++IAIIE SVSPGGGAWLGGQLFSAM++RKPA  FL E+G+ Y+++ NYVV+KHAALFTSTIMSK+L  PN+KLFNA   EDLI +    G R+ GVVTNW LVSM+HD QSCMDPN + A +++S+ GHDGP
Sbjct:   95 PDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGP 229          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47
Identity = 91/135 (67.41%), Postives = 109/135 (80.74%), Query Frame = 2
Query:  305 PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 697
            P+++IAIIE SVSPGGGAWLGGQLFSAMV+RKPA  FL E+G+ Y+++ NYVV+KHAALFTSTIMSK+L  PN KLFNA   EDLI +    G R+ GVVTNW LVSM+HD QSCMDPN + A +V+S+ GHD P
Sbjct:   99 PDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAP 233          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46
Identity = 88/142 (61.97%), Postives = 113/142 (79.58%), Query Frame = 2
Query:  296 KFDPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-----GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R+PA +FL+ELG+ Y+E    NYVV+KHA+LFTST+MSK+L+ PNVKLFNA A EDLI +       ++ GVV NW LV+++HD  SCMDPN + A V++S+ GHDGPF
Sbjct:   96 KARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPF 237          
BLAST of FC931746 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 2
Query:  257 SASASPPYDLNTFKFDPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-------GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 700
            SA  S  Y L T +  P+++I I+E +V+PGGG WLGGQL SAMV RKPA  FLD++G+ Y+++ N+VV+KHAALFTST++SK+LA PNVK+FNA A EDLI+K         R+ G VTNW LVS+NHD QSCMDP+ + A +V S  GHDGPF
Sbjct:   90 SAGLSCAYALGTAR--PDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPF 242          
The following BLAST results are available for this feature:
BLAST of FC931746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
THI4_CITSI1.603e-10280.74Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL2.331e-7766.97Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH2.113e-7059.59Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE4.124e-6683.78Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE2.047e-6581.08Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO1.860e-5064.05Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX1.333e-4866.67Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH1.474e-4767.41Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR2.779e-4661.97Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_UROFA8.087e-4658.06Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionC34108E06EF PostHarvP1 Citrus clementina cDNA clone C34108E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931746 ID=FC931746; Name=FC931746; organism=Citrus clementina; type=EST; length=700bp
CTCGCCGGGGGACTCACCAGTCATCATCACTGCTGCAAATCAAATTACTT
CTCATTATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTTAAAAAAAAAA
AAAAACATGGCAGCCATGACTTCTACAGCTTTCGCTCCTTCAGTTTCGTC
CACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCAC
CTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTG
TCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTT
TGACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCG
GTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAA
CCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGA
CAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGA
GCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCC
GAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTG
GGCGTTGGTGTCAATGAATCACGATACACAGTCTTGCATGGATCCCAATG
TAATGGAAGCGAAGGTGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTT
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