FC931752

Overview
NameFC931752
Unique NameFC931752
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC_PHAVU (Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 3.004e-64
Identity = 118/149 (79.19%), Postives = 132/149 (88.59%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSRFWSKM 448
            T+SGFE FIR+KYTALPDT+ER+LATEVT+ WRYSYES++NLPQKPLYFT++YL VKKVL DTFFGPP  GVYS SVQ+TLY MAKA L RF DI+ VHLKMPN+HFLPVN+SSKD   IVKFEDDVYLPTDEPHGSIEAS SR WSK+
Sbjct:  161 TQSGFENFIRNKYTALPDTRERILATEVTALWRYSYESLYNLPQKPLYFTDKYLEVKKVLADTFFGPPNRGVYSPSVQNTLYLMAKATLNRFPDIAYVHLKMPNLHFLPVNISSKDGP-IVKFEDDVYLPTDEPHGSIEASLSRVWSKL 308          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC2_SOYBN (Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 6.926e-61
Identity = 114/149 (76.51%), Postives = 128/149 (85.91%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSRFWSKM 448
            T+SGF  FIRDKYTALPDT+ER+LATEVT+ WRYSYES ++LPQKPLYFTE+Y  VKKVL DTFFGPP  GVYS SVQ+TLY MAKA L RF DI+ V LKMPN+HFLPVN+S+KD   IVKFEDDVYLPTDEPHGSI+AS SR WSK+
Sbjct:  162 TQSGFVNFIRDKYTALPDTRERILATEVTALWRYSYESQYSLPQKPLYFTEKYQEVKKVLADTFFGPPNGGVYSPSVQNTLYLMAKATLNRFPDIAYVSLKMPNLHFLPVNISNKDGP-IVKFEDDVYLPTDEPHGSIQASLSRLWSKL 309          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC1_SOYBN (Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 6.926e-61
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSRFWSKM 448
            T+SGF  FIRDKYTALPDT+ERM+ATEVT+ WRYSYES+++LPQKPLYFTE+Y  VKKVL DTFFGPPK GVYS SVQ+TLY MAKA L RF DI+ V LK+PN+HF+PVN+S++D   IVKFEDDVYLPTDEPHGSI+AS SR WSK+
Sbjct:  162 TQSGFVNFIRDKYTALPDTRERMVATEVTALWRYSYESLYSLPQKPLYFTEKYQEVKKVLADTFFGPPKGGVYSPSVQNTLYLMAKATLNRFPDIAYVSLKLPNLHFIPVNISNQDGP-IVKFEDDVYLPTDEPHGSIQASLSRLWSKL 309          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC1_CANLI (Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.046e-61
Identity = 112/149 (75.17%), Postives = 128/149 (85.91%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSRFWSKM 448
            TKSGFEGFIRDKYTALP+T ERMLATEVT+ WRYSYES++++PQKPLYFT++YL VKKVL D FFGPP  GVYS SVQ+TLY MAKA L RF +I+ + LKMPNIHFLPVN+S+KD   IVKFE DVYLPTDEPHGSI+AS  R WSK+
Sbjct:  161 TKSGFEGFIRDKYTALPETHERMLATEVTALWRYSYESLYSIPQKPLYFTDKYLEVKKVLADNFFGPPNVGVYSPSVQNTLYLMAKAALNRFPEIASIQLKMPNIHFLPVNISNKDGP-IVKFEADVYLPTDEPHGSIQASLRRLWSKL 308          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC_ARATH (Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 5.488e-58
Identity = 106/149 (71.14%), Postives = 127/149 (85.23%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSRFWSKM 448
            T+SGFE F+RDKYT LP+T+ERMLATEV ++WRYSYESV ++P K LYF+E+++ VKKVLMDTFFGPP+ GVYS SVQ TLY M  AVL RF D+S +HLKMPNIHFLPVNLS+K+   +VKF+DDVYLPTDEPHGSIEA+ SR  SK+
Sbjct:  161 TQSGFERFVRDKYTILPETRERMLATEVNASWRYSYESVASIPTKGLYFSEKFMDVKKVLMDTFFGPPETGVYSPSVQRTLYLMGSAVLKRFADVSSIHLKMPNIHFLPVNLSTKENPSMVKFKDDVYLPTDEPHGSIEATLSRITSKL 309          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC2_CANLI (Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.361e-58
Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSRFWSKM 448
            TKSGFEGFIRDKYTALP+T ERMLATEVT+ WRYSYES++++PQKPLYFT++YL VKKVL DTFFGPP  GVYS SVQ+TLY MAKA        S + LKMPNIHFLPVN+S+KD   IVKF+DDVY PTDEPHGSI+AS SR WSK+
Sbjct:  161 TKSGFEGFIRDKYTALPETHERMLATEVTALWRYSYESLYSIPQKPLYFTDKYLEVKKVLADTFFGPPNVGVYSPSVQNTLYLMAKA-------HSSIQLKMPNIHFLPVNISNKDGP-IVKFDDDVYFPTDEPHGSIQASLSRLWSKL 301          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC_PIG (Uricase OS=Sus scrofa GN=UOX PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSR 433
            T+SGFEGFI+D++T LP+ ++R  AT+V   WRY          + + F   +  V+ +++  F GP  +G YS SVQ TLY +    LG+  +I  + + +PNIH+L +++S     +I K  ++V LP D P+G I  +  R
Sbjct:  166 TQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYHQG-------RDVDFEATWDTVRSIVLQKFAGPYDKGEYSPSVQKTLYDIQVLTLGQVPEIEDMEISLPNIHYLNIDMSK--MGLINK--EEVLLPLDNPYGRITGTVKR 298          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC_RAT (Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSR 433
            T+SGFEGFI+D++T LP+ ++R  AT+V   WRY          + + F   + AV+ +++  F GP   G YS SVQ TLY +    L +  +I  + + +PNIH+  +++S     +I K  ++V LP D P+G I  +  R
Sbjct:  166 TQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYQ--------NRDVDFEATWGAVRDIVLKKFAGPYDRGEYSPSVQKTLYDIQVLTLSQLPEIEDMEISLPNIHYFNIDMSK--MGLINK--EEVLLPLDNPYGKITGTVRR 297          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC_RABIT (Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSR 433
            T+SGFEGFI+D++T LP+ ++R  AT+V   WRY +        + + F   +  V+  +++ F GP  +G YS SVQ TLY +    L R   I  + + +PNIH+  +++S     +I K  ++V LP D P+G I  +  R
Sbjct:  162 TQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYQH-------SQDVDFEATWDIVRDTVLEKFAGPYDKGEYSPSVQKTLYDIQVLTLSRVPQIEDMEISLPNIHYFNIDMSK--MGLINK--EEVLLPLDNPYGKITGTVKR 294          
BLAST of FC931752 vs. ExPASy Swiss-Prot
Match: URIC_MOUSE (Uricase OS=Mus musculus GN=Uox PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18
Identity = 50/144 (34.72%), Postives = 83/144 (57.64%), Query Frame = 2
Query:    2 TKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIEASFSR 433
            T+SGFEGF++D++T LP+ ++R  AT+V   WRY         ++ + F   + AV+ +++  F GP  +G YS SVQ TLY +    L +  +I  + + +PNIH+  +++S     +I K  ++V LP D P+G I  +  R
Sbjct:  166 TQSGFEGFLKDQFTTLPEVKDRCFATQVYCKWRYQ--------RRDVDFEAIWGAVRDIVLQKFAGPYDKGEYSPSVQKTLYDIQVLSLSQLPEIEDMEISLPNIHYFNIDMSK--MGLINK--EEVLLPLDNPYGKITGTVKR 297          
The following BLAST results are available for this feature:
BLAST of FC931752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
URIC_PHAVU3.004e-6479.19Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2[more]
URIC2_SOYBN6.926e-6176.51Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1[more]
URIC1_SOYBN6.926e-6175.17Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2[more]
URIC1_CANLI9.046e-6175.17Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1[more]
URIC_ARATH5.488e-5871.14Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 ... [more]
URIC2_CANLI9.361e-5873.83Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1[more]
URIC_PIG1.726e-1936.11Uricase OS=Sus scrofa GN=UOX PE=2 SV=3[more]
URIC_RAT6.558e-1935.42Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3[more]
URIC_RABIT6.558e-1935.42Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1[more]
URIC_MOUSE1.119e-1834.72Uricase OS=Mus musculus GN=Uox PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34108E12EF PostHarvP1 Citrus clementina cDNA clone C34108E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931752 ID=FC931752; Name=FC931752; organism=Citrus clementina; type=EST; length=617bp
AACCAAGTCAGGTTTTGAAGGGTTTATTAGGGACAAATACACGGCTCTGC
CTGATACTCAAGAAAGGATGCTGGCAACAGAGGTCACTAGTACGTGGAGG
TATTCTTATGAATCTGTCTTTAACCTCCCACAGAAACCGCTTTACTTCAC
AGAGAGATACCTGGCTGTGAAAAAAGTTCTGATGGATACTTTCTTTGGTC
CTCCGAAAGAGGGAGTATACAGTGCGTCTGTCCAAAGCACTCTTTACCAA
ATGGCAAAGGCCGTCCTTGGCAGGTTTCATGACATATCATTGGTCCATCT
AAAAATGCCCAATATCCATTTCTTACCAGTTAATTTATCAAGCAAGGACA
AGGACATTATAGTGAAGTTTGAAGATGATGTGTATTTACCAACAGACGAA
CCTCATGGATCAATCGAAGCAAGCTTCAGCAGGTTCTGGTCAAAGATGTA
GAAGTGTTGCAAGATGTGAAGTGTACACTATGTGTTTCATCATTCTCAAA
ATAATAAGTGCAACTGATTGTATCATGTTGTTAAATTAAAGTTTTATTGT
TGGATTTATGCTTGAACCTTAAGCATCCTAACTTGCAAACTTTAAAAATT
CATTTGTGCTGGTAAAA
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