FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931759_ssr51 microsatellite FC931759_ssr51:51..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:304..1018. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 391.734 bits (1005), Expect = 1.996e-108
Identity = 189/205 (92.20%), Postives = 198/205 (96.59%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW LVNKQKPIWMRKPEEI KEEYAAFYKSL+NDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+TK+AELLRYHSTKSGDELTSL DY TRMKE +
Sbjct:  255 SHEWDLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ 459
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.996e-108
Identity = 189/205 (92.20%), Postives = 198/205 (96.59%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW LVNKQKPIWMRKPEEI KEEYAAFYKSL+NDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+TK+AELLRYHSTKSGDELTSL DY TRMKE +
Sbjct:  255 SHEWDLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ 459
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 389.808 bits (1000), Expect = 2.615e-108
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+ K+AELLRYHSTKSGDELTSL DY TRMKE +
Sbjct:  257 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ 461

HSP 2 Score: 23.8682 bits (50), Expect = 2.615e-108
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 
Query:  688 GQNDIYYIT 714
            GQNDIYYIT
Sbjct:  460 GQNDIYYIT 468
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 2.615e-108
Identity = 190/205 (92.68%), Postives = 197/205 (96.10%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+ K+AELLRYHSTKSGDELTSL DY TRMKE +
Sbjct:  257 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ 461

HSP 2 Score: 23.8682 bits (50), Expect = 2.615e-108
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 
Query:  688 GQNDIYYIT 714
            GQNDIYYIT
Sbjct:  460 GQNDIYYIT 468
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 4.452e-108
Identity = 188/205 (91.71%), Postives = 197/205 (96.10%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            S+EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNC+ELIPEYL FVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+ K AELLRYHSTKSGDE+TSL DY TRMKE +
Sbjct:  255 SNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQ 459

HSP 2 Score: 23.8682 bits (50), Expect = 4.452e-108
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 
Query:  688 GQNDIYYIT 714
            GQNDIYYIT
Sbjct:  458 GQNDIYYIT 466
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 388.267 bits (996), Expect = 2.207e-107
Identity = 188/205 (91.71%), Postives = 198/205 (96.59%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW+++NKQKPIW+RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+TK+AELLRYHSTKSGDELTSL DY TRMKE +
Sbjct:  257 SHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ 461
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.207e-107
Identity = 188/205 (91.71%), Postives = 198/205 (96.59%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW+++NKQKPIW+RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+TK+AELLRYHSTKSGDELTSL DY TRMKE +
Sbjct:  257 SHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQ 461
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.868e-106
Identity = 184/205 (89.76%), Postives = 196/205 (95.61%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW L+NKQKPIW+RKPEEITK+EYA+FYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+VDS+DLPLNISRE LQQNKILKVIRKNLVKKCIE+F EIAENKEDYNKFYE+FSKNLKLGIHEDS N+ KLA+LLRYHSTKSGDE+TSL DY TRMKE +
Sbjct:   56 SHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSGDEMTSLKDYVTRMKEGQ 260
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.211e-105
Identity = 183/205 (89.27%), Postives = 196/205 (95.61%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW L+NKQKPIW+RKPEEITKEEYA+FYKSLTNDWE+HLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+VDS+DLPLNISRE LQQNKILKVIRKNLVKKCIE+F EIAENK+DYNKFYE+FSKNLKLGIHEDS N+ KLA+LLRY+STKSGDELTSL DY TRMKE +
Sbjct:  260 SHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKDDYNKFYEAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQ 464
[Close]
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 380.563 bits (976), Expect = 4.601e-105
Identity = 182/205 (88.78%), Postives = 194/205 (94.63%), Query Frame = 2 
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            SHEW L+NKQKPIW+RKPEEITKEEYAAFYKSLTNDWE+HLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYL FVKG+VDS+DLPLNISRETLQQNKILKVIRKNLVKKCIE+F EIAENKEDY KFYE+FSKNLKLGIHEDS N+ K+A+LLRYHSTKSGDE+TS  DY TRMKE +
Sbjct:  256 SHEWELINKQKPIWLRKPEEITKEEYAAFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLSFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYTKFYEAFSKNLKLGIHEDSQNRGKIADLLRYHSTKSGDEMTSFKDYVTRMKEGQ 460
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HSP83_ARATH1.996e-10892.20Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH1.996e-10892.20Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP81_ORYSJ2.615e-10892.68Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI2.615e-10892.68Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP80_SOLLC4.452e-10891.71Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_ORYSJ2.207e-10791.71Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.207e-10791.71Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP82_TOBAC1.868e-10689.76Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP83_IPONI1.211e-10589.27Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP81_ARATH4.601e-10588.78Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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