FC931763

Overview
NameFC931763
Unique NameFC931763
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15386 contig Ccv1_Contig15386:1..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC931763 vs. ExPASy Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 1.463e-11
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 2 
Query:  551 VHLQLMGIQQAGVPLPTDAVEEPVFV 628
            VHLQLMG+QQ GVPLP+DAVEEPVFV
Sbjct:   79 VHLQLMGVQQQGVPLPSDAVEEPVFV 104

HSP 2 Score: 38.1206 bits (87), Expect = 1.463e-11
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 3 
Query:  624 LSCQTYHGILRRRQSRAKAESENK 695
            ++ + YHGILRRRQSRA+ ES+NK
Sbjct:  104 VNAKQYHGILRRRQSRARLESQNK 127
The following BLAST results are available for this feature:
BLAST of FC931763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NFYA7_ARATH1.463e-1188.46Nuclear transcription factor Y subunit A-7 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC34108F11EF PostHarvP1 Citrus clementina cDNA clone C34108F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931763 ID=FC931763; Name=FC931763; organism=Citrus clementina; type=EST; length=739bp
GCAGAGGAGAGCCAGAAACAGCCTGCTATAGAACACAGTGCCTAGTTTCT
CTATAAGATTTGAGTTGCAGATTCTATATGCGTGACGGCCTCATGACTTC
CTCTGTGCATGATATGTCCGGGTAAGATGATAGTTGCAATCCTTTGTGAA
CCGTGTGAATTTCAGCCCATCCAGGGATGCAGACCTGTGTATTTATTTAC
ATTCTGAACATCATCTTATTTCCCAGGGTTTCGACCCTCTTTTCAAGAAA
CAGAACCAAATGACCCCAGTCCTGATGGTTATGTTGGAACCCGGGCTTGA
ATGTTATAACAGTGACGCTGATGAGCAGCGGAAGCATCCAGAATCCCAGT
TACAGTCCTCAACACCTGCAATGGGAATGTCTCATCCAAGCATCACAACT
CCCAATGTTCAATATGCAACGCATCAAGTCGGGGCAGGCCATGCTATGGC
ACCAGCAGCTTACCCCTATCCAGATCCGTACTACAGAAGCATATTTGCTC
CCTATGATGCACAACCATATCCTCCACAGCCATATGGTGGACAACCAATG
GTCCATCTTCAGTTGATGGGAATTCAGCAAGCTGGAGTTCCTTTGCCAAC
AGATGCAGTTGAGGAGCCCGTGTTTGTCATGCCAAACATATCATGGCATC
TTGCGACGACGACAATCTCGTGCAAAAGCTGAATCTGAAAACAAGTTTTA
AGTCTCGAAAGCATACTGCATGATCTCGACATCTGCATG
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