FC931779

Overview
NameFC931779
Unique NameFC931779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9434 contig Ccv1_Contig9434:4..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931779 vs. ExPASy Swiss-Prot
Match: ABA2_PRUAR (Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.680e-59
Identity = 121/202 (59.90%), Postives = 150/202 (74.26%), Query Frame = 2
Query:   92 FLKNPLPVPVYKHSCIEFSRYDHCINYKFRTGT-SGQSKNPTQMKAAVA---ESPTNNSDSENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEEQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDF 685
            F +   P+P+ K   +EFS   H  +Y  R+ T SGQ K  T+++A VA   E P+  + ++ KK                   K+KGF+V+VFEKD+SA+RGE QYRGPIQIQSNALAALEAID+DVAEEVMR GCVTGDRINGLVDG+SG+WY+KFDTFTPA ERGLPVTRVISR+ LQQILA+AVG+EII+N+SNV++F
Sbjct:   17 FSRTHFPIPINKDFPLEFSPCIHT-DYHLRSRTRSGQKKCLTEVRATVASPTEVPSAPASTQPKKLRILVAGGGIGGLVFALAAKKKGFDVVVFEKDLSAVRGEGQYRGPIQIQSNALAALEAIDMDVAEEVMRVGCVTGDRINGLVDGVSGTWYVKFDTFTPAVERGLPVTRVISRIALQQILARAVGEEIIINDSNVVNF 217          
BLAST of FC931779 vs. ExPASy Swiss-Prot
Match: ABA2_SOLLC (Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.010e-53
Identity = 110/168 (65.48%), Postives = 128/168 (76.19%), Query Frame = 2
Query:  215 QMKAAVAESP---TNNSDS--------ENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEEQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDF 685
            ++KA +AE+P   T  +DS          KK                   K++GF+VLVFE+D+SAIRGE QYRGPIQIQSNALAALEAIDLDVAE++M AGC+TG RINGLVDGISG+WY KFDTFTPA ERGLPVTRVISRMTLQQILA+AVG+EII+NESNV+DF
Sbjct:   55 KVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDF 222          
BLAST of FC931779 vs. ExPASy Swiss-Prot
Match: ABA2_CAPAN (Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 105/170 (61.76%), Postives = 128/170 (75.29%), Query Frame = 2
Query:  191 SGQSKNPTQMKAAVAESPT-----NNSDSENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEEQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDF 685
            +G  K    +KA +AE+P      +NS+   KK                   K++GF+VLVFE+D+SAIRGE QYRGPIQIQSNALAALEAID+DVAEE+M AGC+TG RINGLVDGISG+WY KFDTFTPA ERGLPVTRVISRMTLQQILA+  G+++I+NES+V++F
Sbjct:   45 NGHIKKVKGVKATLAEAPATPTEKSNSEVPQKKLKVLVAGGGIGGLVFALAGKKRGFDVLVFERDISAIRGEGQYRGPIQIQSNALAALEAIDMDVAEEIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARLQGEDVIMNESHVVNF 214          
BLAST of FC931779 vs. ExPASy Swiss-Prot
Match: ABA2_NICPL (Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.541e-52
Identity = 114/206 (55.34%), Postives = 140/206 (67.96%), Query Frame = 2
Query:   86 SCFLKNPLPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQM-KAAVAESP-----TNNSDSENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEEQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDF 685
            S F +  LP+ + K    E      C     R+  +GQ K    + KA +AE+P     T+      KK                   K++GF+VLVFE+D+SAIRGE QYRGPIQIQSNALAALEAID+DVAE++M AGC+TG RINGLVDG+SG+WY KFDTFTPA ERGLPVTRVISRMTLQQ LA+AVG++II+NESNV++F
Sbjct:   15 SAFSRKQLPLLISKDFPTELYHSLPCS----RSLENGQIKKVKGVVKATIAEAPATIPPTDLKKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDMDVAEDIMNAGCITGQRINGLVDGVSGNWYCKFDTFTPAVERGLPVTRVISRMTLQQNLARAVGEDIIMNESNVVNF 216          
The following BLAST results are available for this feature:
BLAST of FC931779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ABA2_PRUAR4.680e-5959.90Zeaxanthin epoxidase, chloroplastic OS=Prunus arme... [more]
ABA2_SOLLC1.010e-5365.48Zeaxanthin epoxidase, chloroplastic OS=Solanum lyc... [more]
ABA2_CAPAN1.904e-5261.76Zeaxanthin epoxidase, chloroplastic OS=Capsicum an... [more]
ABA2_NICPL5.541e-5255.34Zeaxanthin epoxidase, chloroplastic OS=Nicotiana p... [more]
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Properties
Property NameValue
Genbank descriptionC34201B03EF PostHarveN Citrus clementina cDNA clone C34201B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931779 ID=FC931779; Name=FC931779; organism=Citrus clementina; type=EST; length=685bp
GAGGAGGGGAGAACACTGCAGAAAGAAGCCGTTGGAGAAACAAGATGGTT
TCATCTATGTTCTACAATTCAGTCAATCTTTCAACAGCTGTTTTCTCAAG
AACCCACTTCCAGTTCCTGTATACAAACATTCTTGCATTGAATTTTCACG
TTATGATCACTGTATTAACTACAAATTCAGGACCGGAACAAGTGGGCAAA
GCAAGAACCCGACACAAATGAAAGCTGCAGTGGCAGAGTCCCCTACTAAT
AACAGTGACAGTGAAAACAAGAAATTGAGGATTTTGGTGGCTGGTGGTGG
GATTGGAGGACTTGTATTTGCTTTGGCTGCTAAAAGGAAAGGATTTGAAG
TGCTGGTGTTTGAGAAAGATATGAGTGCTATAAGAGGTGAGGAACAATAC
AGAGGTCCAATTCAGATACAAAGCAATGCATTGGCTGCTTTGGAAGCTAT
TGATTTGGATGTTGCTGAGGAAGTTATGAGAGCTGGATGTGTTACCGGTG
ATAGAATTAATGGTTTGGTTGATGGGATTTCTGGTTCTTGGTACATCAAG
TTTGATACTTTCACTCCTGCAGCAGAAAGGGGACTGCCAGTCACAAGAGT
AATTAGCCGAATGACTTTGCAACAAATACTAGCTAAAGCGGTTGGGGATG
AAATCATTTTGAATGAAAGTAATGTTATTGATTTT
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