FC931790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 5.300e-52 Identity = 101/165 (61.21%), Postives = 122/165 (73.94%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M NL TQKRLAASV+ CGKRK+W+DPNE++EISNANSRQ IRKLV DGL+IRKP MHSR R+ + A+R GRH G GKRKGT +ARMPS +GKIDKHLYH LY +KGNTFKHKRAL+EHIQ+AKAE R ++++E+ DA+RA+ Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 203.371 bits (516), Expect = 9.041e-52 Identity = 99/165 (60.00%), Postives = 122/165 (73.94%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M NL TQKRLAASV+ CGKRK+W+DPNE++EISNANSRQ +RKL+ DGL+IRKP MHSR R+ + A+R GRH G GKRKGT +ARMPS +GKIDKHLYH LY +KGNTFKHKRAL+EHIQ+AKAE R ++++E+ DA+RA+ Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRAR 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 196.438 bits (498), Expect = 1.105e-49 Identity = 101/188 (53.72%), Postives = 124/188 (65.96%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAKNXXXXXXXXXXXXXXXDALIGEE 608 M NL TQKRLAASVVG GKRK+WLDPNE +EI+ ANSR IRKLV +G I++K VT+HS++ R +++R GRH G GKRKGT++AR+PSQ AGKIDKHLYH LY SKGN FKHKRALVEHI +AKA+ R++ L EE +A+R KN DAL+ E+ Sbjct: 1 MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEKRDALLKED 188
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 1.034e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAKN 542 MV+L QKRLA+SV+ CGKRK+WLDPNE ++IS ANSRQ IRKLV DG IIRKP +HSR+ AR+LN A+R GRH G GKRKGT++AR+P++ KID+H+YH++Y KGN FK+KR L+E I K+KAE+AR++ L ++ +AKRAKN Sbjct: 1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.304e-47 Identity = 93/165 (56.36%), Postives = 118/165 (71.52%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKLV DGLII+KPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY +KGN FK+KR L+EHI K KA+RAR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.931e-47 Identity = 92/166 (55.42%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAKN 542 MV+L QKRLAASV+ CGK K+WLDPNE +IS ANSRQ IRKLV DG IIRKP +HSR+ AR LNEA+R GRH G GKRKGT++AR+P++ + KID+H+YH++Y KGN FK+KR L+E I K KAE+AR++ L ++ +AKR KN Sbjct: 1 MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKN 166
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.705e-47 Identity = 93/165 (56.36%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKLV DGLII+KPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + A KID+H+YH LY +KGN FK+KR L+EHI K KA++AR ++L ++ +A+R K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.756e-47 Identity = 93/165 (56.36%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKLV DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKL+ DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_PONAB (60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKL+ DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165 The following BLAST results are available for this feature:
BLAST of FC931790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931790 ID=FC931790; Name=FC931790; organism=Citrus clementina; type=EST; length=673bpback to top |