FC931816

Overview
NameFC931816
Unique NameFC931816
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14138 contig Ccv1_Contig14138:1..585. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DNJ10_ARATH (Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 9.463e-57
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEK 582
            KAYYIKAR+VHPDKNPNDP AA NFQVLGEAYQVLSD  QRQAYDA GKSGIST+AIIDPAAIFAMLFGSELFE YIGQLAMAS+ASLDIFTEG++FD KK+Q+K+++VQKE+
Sbjct:   24 KAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQAYDACGKSGISTDAIIDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQFDTKKIQEKLRIVQKER 136          

HSP 2 Score: 46.2098 bits (108), Expect = 9.463e-57
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 3
Query:  177 MVKETEYYDVLGVSPTASEAEIK 245
            MVKETEYYDVLGVSPTA+E+EIK
Sbjct:    1 MVKETEYYDVLGVSPTATESEIK 23          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: CAJ1_YEAST (Protein CAJ1 OS=Saccharomyces cerevisiae GN=CAJ1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.070e-20
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGK-SGISTEAIIDPAAIFAMLFGSELFEDYIGQLAM 489
            KAY  KA + HPDK+P+DP A   FQ +GEAYQVLSDP  R  YD +GK   +  +   D +  F  +FG + F+D+IG+ ++
Sbjct:   24 KAYRRKAMETHPDKHPDDPDAQAKFQAVGEAYQVLSDPGLRSKYDQFGKEDAVPQQGFEDASEYFTAIFGGDGFKDWIGEFSL 106          

HSP 2 Score: 38.891 bits (89), Expect = 3.070e-20
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  177 MVKETEYYDVLGVSPTASEAEIK 245
            MVKETEYYD+LG+ P A+  EIK
Sbjct:    1 MVKETEYYDILGIKPEATPTEIK 23          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DJP1_YEAST (DnaJ-like protein 1 OS=Saccharomyces cerevisiae GN=DJP1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.483e-19
Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYG-KSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMK 564
            KAY  K+ + HPDKNPNDP A + FQ + EAYQVL D   R  YD YG K  I      D A  F+++FG + F  YIG+L +     L    + EE +A+   +K K
Sbjct:   24 KAYRKKSIQEHPDKNPNDPTATERFQAISEAYQVLGDDDLRAKYDKYGRKEAIPQGGFEDAAEQFSVIFGGDAFASYIGELML-----LKNLQKTEELNAEDEAEKEK 126          

HSP 2 Score: 36.5798 bits (83), Expect = 1.483e-19
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  177 MVKETEYYDVLGVSPTASEAEIK 245
            MV +TEYYD+LGVS TAS  EIK
Sbjct:    1 MVVDTEYYDLLGVSTTASSIEIK 23          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: YAY1_SCHPO (Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe GN=SPAC4H3.01 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.562e-14
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPL-AAQNFQVLGEAYQVLSDPAQRQAYDAYGK-SGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEE-FDAKKLQDKMKVV 570
            KAY   A K HPDKNP+DP  A++ FQ + EAYQVL D   R  YD +GK   +  +   D    F  LFG   F +++G+L+       ++F E +   +  ++ DK +++
Sbjct:   26 KAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQFGKEKAVPEQGFTDAYDFFTNLFGGAPFREWVGELSFVK----EMFREEDSAVEQGQMNDKQQLL 133          

HSP 2 Score: 28.8758 bits (63), Expect = 9.562e-14
Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  186 ETEYYDVLGVSPTASEAEIK 245
            +TEYYD+LG+S  A+  +IK
Sbjct:    6 DTEYYDLLGISTDATAVDIK 25          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DNJA3_HUMAN (DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens GN=DNAJA3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.235e-13
Identity = 38/91 (41.76%), Postives = 49/91 (53.85%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA------------IIDPAAIFAMLFG---SELFEDY 471
            KAYY  A+K HPD N +DP A + F  L EAY+VLSD  +R+ YDAYG +G    A             +DP  +F  +FG   S  F D+
Sbjct:  111 KAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTVDPEELFRKIFGEFSSSSFGDF 201          

HSP 2 Score: 27.7202 bits (60), Expect = 1.235e-13
Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 3
Query:  171 SVMVKETEYYDVLGVSPTASEAEIKSLLHQ 260
            S  + + +YY +LGV   AS+ EIK   +Q
Sbjct:   86 SAPLAKEDYYQILGVPRNASQKEIKKAYYQ 115          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 4.592e-13
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYG-----KSGISTEAIIDPAAIFAMLFG 450
            KAY   A K HPDKNP++    + F+++ +AY+VLSDP +R  YD  G     + G  + +   P  IF M FG
Sbjct:   24 KAYRKLALKYHPDKNPDE---GEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDIFDMFFG 94          

HSP 2 Score: 39.6614 bits (91), Expect = 4.592e-13
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  177 MVKETEYYDVLGVSPTASEAEIK 245
            MVKET+YYD+LGV P+AS  EIK
Sbjct:    1 MVKETQYYDILGVKPSASPEEIK 23          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.964e-13
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYG-----KSGISTEAIIDPAAIFAMLFG 450
            KAY   A K HPDKNP++    + F+++ +AY+VLSDP +R  YD  G     + G  + +   P  IF M FG
Sbjct:   24 KAYRKLALKYHPDKNPDE---GEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGSGSPSFSSPMDIFDMFFG 94          

HSP 2 Score: 39.6614 bits (91), Expect = 5.964e-13
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  177 MVKETEYYDVLGVSPTASEAEIK 245
            MVKET+YYD+LGV P+AS  EIK
Sbjct:    1 MVKETQYYDILGVKPSASPEEIK 23          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.968e-13
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA 411
            KAY  KA + HPD+NP+DP A Q F+   EAY+VLSDP +RQ YD +G  G+ + A
Sbjct:   22 KAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGVDSGA 77          

HSP 2 Score: 27.7202 bits (60), Expect = 5.968e-13
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  192 EYYDVLGVSPTASEAEIK 245
            +YYD+LGV   AS+ EIK
Sbjct:    4 DYYDILGVDEDASDKEIK 21          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: DNJA3_MOUSE (DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus GN=Dnaja3 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.000e-12
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEA------------IIDPAAIFAMLFG 450
            KAYY  A+K HPD N +DP A + F  L EAY+VLSD  +R+ YDAYG +G                  +DP  +F  +FG
Sbjct:  111 KAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGTSSSGQGYWRGGPSVDPEELFRKIFG 191          

HSP 2 Score: 26.9498 bits (58), Expect = 1.000e-12
Identity = 11/30 (36.67%), Postives = 18/30 (60.00%), Query Frame = 3
Query:  171 SVMVKETEYYDVLGVSPTASEAEIKSLLHQ 260
            S  + + +YY +LGV   AS+ +IK   +Q
Sbjct:   86 SASLAKDDYYQILGVPRNASQKDIKKAYYQ 115          
BLAST of FC931816 vs. ExPASy Swiss-Prot
Match: YHXB_SCHPO (Uncharacterized J domain-containing protein C3E7.11c OS=Schizosaccharomyces pombe GN=SPBC3E7.11c PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.009e-12
Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 1
Query:  244 KAYYIKARKVHPDKNPNDPLAA-QNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIIDPA-AIFAMLFGSELFEDYIGQLAMASVASLDIFTEGEEFDAKKLQDKMKVVQKEK 582
            K+Y   A   HPDKN  +P AA + FQ L EAYQVLSDP  R+ YD  GK G   +A  + A   F  LFG + F DY+G+L +       I  E E    +  ++  K +Q+E+
Sbjct:   27 KSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYDKLGKVGAVPDAGFEDAFEFFKNLFGGDSFRDYVGELNLLKELCKMINEEPELKAIEDTEESKKQLQREE 141          

HSP 2 Score: 21.557 bits (44), Expect = 1.009e-12
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 3
Query:  180 VKETEYYDVLGVSPTASEAEIK 245
            V + +YYD+L +S  A    IK
Sbjct:    5 VVDRDYYDILNISVDADGDTIK 26          
The following BLAST results are available for this feature:
BLAST of FC931816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DNJ10_ARATH9.463e-5784.07Chaperone protein dnaJ 10 OS=Arabidopsis thaliana ... [more]
CAJ1_YEAST3.070e-2045.78Protein CAJ1 OS=Saccharomyces cerevisiae GN=CAJ1 P... [more]
DJP1_YEAST1.483e-1942.59DnaJ-like protein 1 OS=Saccharomyces cerevisiae GN... [more]
YAY1_SCHPO9.562e-1435.71Uncharacterized J domain-containing protein C4H3.0... [more]
DNJA3_HUMAN1.235e-1341.76DnaJ homolog subfamily A member 3, mitochondrial O... [more]
DNJA4_HUMAN4.592e-1340.54DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA4_MOUSE5.964e-1340.54DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNAJ_SALRD5.968e-1353.57Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]
DNJA3_MOUSE1.000e-1241.98DnaJ homolog subfamily A member 3, mitochondrial O... [more]
YHXB_SCHPO1.009e-1240.00Uncharacterized J domain-containing protein C3E7.1... [more]

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Properties
Property NameValue
Genbank descriptionC34201E05EF PostHarveN Citrus clementina cDNA clone C34201E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931816 ID=FC931816; Name=FC931816; organism=Citrus clementina; type=EST; length=583bp
GGAAGGAATCAGAGGTCAGCGCGTGGGAGAGTAAATCTGCTTTCATCCTT
TTTGTATGCTCTATTCTATCTGTTATCTTTCTGAATCTGCTTCGTAACTA
ATCAGTTTGATTTAGATTGTAAATCGAAGAAAGCTAAGCTAGACTAGTAG
TAATTTTCGGGTCTTGAGAATCAGTGATGGTTAAGGAGACGGAATATTAC
GACGTCCTAGGCGTCAGCCCAACGGCTTCGGAGGCCGAGATCAAAAGCTT
ACTACATCAAGGCACGTAAGGTTCACCCTGATAAAAACCCAAATGATCCT
CTTGCTGCTCAAAATTTTCAGGTTTTGGGAGAGGCTTACCAGGTATTGAG
TGATCCAGCCCAACGGCAAGCATATGATGCTTATGGGAAATCAGGAATCT
CAACTGAAGCAATTATTGATCCTGCAGCAATCTTCGCGATGCTTTTTGGA
AGTGAGCTTTTTGAGGATTATATAGGTCAGCTTGCCATGGCTTCAGTGGC
TTCTCTAGACATTTTCACTGAAGGGGAAGAGTTTGATGCTAAAAAGTTGC
AAGACAAAATGAAGGTTGTTCAGAAGGAAAAAA
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