FC931855

Overview
NameFC931855
Unique NameFC931855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length421
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:447..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 2.189e-71
Identity = 133/140 (95.00%), Postives = 139/140 (99.29%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDLIRKMLC QPSERLTAHEVLCHPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMFKAMDTD+SGAITFDELKAGLR+YGSTLKDTEIR+LMDAADVDNSGTIDYGEFIAAT
Sbjct:  321 ISESAKDLIRKMLCMQPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDSSGAITFDELKAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAAT 460
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 2.421e-70
Identity = 131/140 (93.57%), Postives = 137/140 (97.86%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            +S+SAKDLIRKMLC +PSERLTAHEVLCHPWICENGVAPDR+LDPAVLSRLK FSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR+YGSTLKD EIR+LMDAADVDNSGTIDYGEFIAAT
Sbjct:  299 LSESAKDLIRKMLCMRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAAT 438
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 3.495e-69
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISDSAKDLIRKMLCS PSERLTAHEVL HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+ MF+AMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM+AADVDNSGTIDY EFIAAT
Sbjct:  312 ISDSAKDLIRKMLCSSPSERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLRAMFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAAT 451
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 7.787e-69
Identity = 130/140 (92.86%), Postives = 137/140 (97.86%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISDSAK+LIR MLCS+PSERLTAH+VL HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLK+MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM+AAD+D SGTIDYGEFIAAT
Sbjct:  251 ISDSAKNLIRGMLCSRPSERLTAHQVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKQMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDKSGTIDYGEFIAAT 390
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 1.124e-67
Identity = 128/140 (91.43%), Postives = 136/140 (97.14%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISDSAKDLIR+ML S+P+ERLTAHEVL HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+EMF+AMDTDNSGAITFDELKAGLR+YGSTLKDTEI DLMDAADVDNSGTIDY EFIAAT
Sbjct:  324 ISDSAKDLIRRMLSSKPAERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAAT 463
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.989e-56
Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISDSAKDLIRKML   P  RLTAHEVL HPWI ++ +APD+ LD AVLSRLKQFSAMNKLKKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLMDAAD+D SGTIDYGEFIAAT
Sbjct:  261 ISDSAKDLIRKMLDQNPKTRLTAHEVLRHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 400
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 4.432e-56
Identity = 108/140 (77.14%), Postives = 122/140 (87.14%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+RKML   P  RLTAH+VLCHPW+  +GVAPD+ LD AVLSR+KQFSAMNK KKMALRVIAESLSEEEIAGLK+MFK +D DNSG ITF+ELKAGL+R G+ LK++EI DLM AADVDNSGTIDY EFIAAT
Sbjct:  413 ISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAAT 552
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.200e-55
Identity = 107/140 (76.43%), Postives = 121/140 (86.43%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+RKML   P +RLTAH+VLCHPW+  +GVAPD+ LD AVLSR+KQFSAMNK KKMALRVIAESLSEEEIAGLKEMF  +D D SG ITF+ELKAGL+R G+ LK++EI DLM AADVDNSGTIDY EFIAAT
Sbjct:  377 ISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAAT 516
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.862e-54
Identity = 103/140 (73.57%), Postives = 120/140 (85.71%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS++AKDLI KML   P +R++AHE LCHPWI +   APD+ LDPAVLSRLKQFS MNK+KKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITF+ELKAGL+R GS L ++EI+ LMDAAD+DNSGTIDYGEF+AAT
Sbjct:  253 ISEAAKDLIYKMLERSPKKRISAHEALCHPWIVDEQAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAAT 392
[Close]
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.862e-54
Identity = 103/140 (73.57%), Postives = 119/140 (85.00%), Query Frame = 2 
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+ AKDLI KML   P +R++AHE LCHPWI +   APD+ LDPAVLSRLKQFS MNK+KKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITF+ELKAGL+R GS L ++EI+ LMDAAD+DNSGTIDYGEF+AAT
Sbjct:  252 ISEGAKDLIYKMLDRSPKKRISAHEALCHPWIVDEHAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAAT 391
The following BLAST results are available for this feature:
BLAST of FC931855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CDPK4_SOLTU2.189e-7195.00Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPK5_SOLTU2.421e-7093.57Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPK6_ARATH3.495e-6993.57Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPKQ_ARATH7.787e-6992.86Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK5_ARATH1.124e-6791.43Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]
CDPK_SOYBN1.989e-5678.57Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPK2_ARATH4.432e-5677.14Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPK1_ARATH2.200e-5576.43Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPKB_ARATH1.862e-5473.57Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK4_ARATH1.862e-5473.57Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34201H08EF PostHarveN Citrus clementina cDNA clone C34201H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931855 ID=FC931855; Name=FC931855; organism=Citrus clementina; type=EST; length=421bp
AATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAAC
CGTCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGT
GAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCG
TCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGG
TTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTAAAGGAAATG
TTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACATTTGATGAACT
CAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGATACAGAGATAC
GTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAACTATTGATTAT
GGAGAATTTATAGCTGCNACT
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