FC931876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931876 vs. ExPASy Swiss-Prot
Match: TM120_DICDI (Transmembrane protein 120 homolog OS=Dictyostelium discoideum GN=tmem120 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 244 FVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEI 579 FV++F+G +NV+ R++ + ++K+EY ++ +T +F +Q WLL+ Y LALRENIL +NGS I+PWWI HHY ++ +L +L + + Sbjct: 128 FVRLFLGQVNVKHMRENEKFRLKQEYEKFKKKTNPQFILFVVLLLLYPQ-------SSFVTTSWQIWLLYYYITLALRENILLVNGSSIKPWWIMHHYLSIAGSLTNLLFPL 232
BLAST of FC931876 vs. ExPASy Swiss-Prot
Match: T120A_RAT (Transmembrane protein 120A OS=Rattus norvegicus GN=Tmem120a PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 1 Query: 151 ADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQ 669 A +LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY ++ T S + D + L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ Sbjct: 80 AQELESQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQ 237
BLAST of FC931876 vs. ExPASy Swiss-Prot
Match: T120A_MOUSE (Transmembrane protein 120A OS=Mus musculus GN=Tmem120a PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 1 Query: 151 ADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQ 669 A +LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY ++ T S + D + L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ Sbjct: 80 AQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQ 237
BLAST of FC931876 vs. ExPASy Swiss-Prot
Match: T120A_HUMAN (Transmembrane protein 120A OS=Homo sapiens GN=TMEM120A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 1 Query: 151 ADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQ 669 A +LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY ++ T S + D + L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ Sbjct: 80 AQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQ 237
BLAST of FC931876 vs. ExPASy Swiss-Prot
Match: T120A_BOVIN (Transmembrane protein 120A OS=Bos taurus GN=TMEM120A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 49/174 (28.16%), Postives = 81/174 (46.55%), Query Frame = 1 Query: 151 ADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYR-DRTAXXXXXXXXXXXXXRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQ 669 A +LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY ++ T S + D + L++ Y L +RE+IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ Sbjct: 80 ARELENQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQ 237 The following BLAST results are available for this feature:
BLAST of FC931876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931876 ID=FC931876; Name=FC931876; organism=Citrus clementina; type=EST; length=731bpback to top |