FC931889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.920e-34 Identity = 70/115 (60.87%), Postives = 92/115 (80.00%), Query Frame = 1 Query: 334 QFSAYGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQALS-SGYQRFSLSTIRLLMFLFRNPHDSL-RIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIG 672 QFS+Y F P THP+++RSFE DR+RSGF++E+EL+QALS SGY S TIRLL+F+++ P DSL R+GPKE+ +LW+CL QWRAIF RYDRDRSGK++ +LRDA Y++G Sbjct: 41 QFSSYS-GMFSPETHPEIVRSFESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLGPKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLG 154
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 337 FSAYGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQALSSGYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYA 678 F++ SAFPPGT P+++ F+ DRD SGFID+ ELQ ALSS Q FS+ T+ LLM+LF N + +IGPKEF L+ L WR+IFER+D+DRSG+ID ELRDAL S+G++ Sbjct: 153 FASLVPSAFPPGTDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTN-SNVRKIGPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFS 265
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 1 Query: 337 FSAYGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQALSSGYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGYA 678 F++ S F PGT P+++ F+ D+D SGFID+ ELQ ALSS QRFS+ T+ LLM+LF N ++++IGPKEF L+ L WR+IFER D+DRSG+ID+ ELRDAL S+G++ Sbjct: 172 FASLIPSGFAPGTDPNIVACFQAADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTN-SNAMKIGPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFS 284
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 334 QFSAYGHSA----FPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 Q +YG A PPG P+ F+ VD D SG+I EL+QAL ++ + F+ T ++M +F + +S RI F+ LW + QWR +F++YDRDRSG I+ EL AL +GY Sbjct: 97 QHGSYGQGAPAGNIPPGVDPEAFSWFQTVDTDHSGYISLKELKQALVNTNWSSFNDETCTMMMNMF-DKSNSGRIDMFGFSALWRFIQQWRNLFQQYDRDRSGSINQGELHQALCQMGY 214
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 346 YGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 YG PP P+ F+ VD D SG+I EL+QAL +S + F+ T +++ +F + S RI F+ LW L QWR +F++YDRDRSG I EL+ AL +GY Sbjct: 97 YGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMF-DKTKSGRIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQALSQMGY 206
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 346 YGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 YG PP P+ F+ VD D SG+I EL+QAL + + F+ T +++ +F + S RI F+ LW + QW+ +F++YDRDRSG I EL+ AL +GY Sbjct: 106 YGQGGAPPNVDPEAYSWFQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMF-DKTKSGRIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGY 215
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PEF1_RAT (Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 346 YGHSAFPPGTHPDVIRSFEMVDRDRSGFIDENELQQAL-SSGYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 YG PP P+ F+ VD D SG+I EL+QAL +S + F+ T +++ +F RI F+ LW L QW+ +F++YDRD SG I EL+ AL +GY Sbjct: 105 YGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKTG-RIDVVGFSALWKFLQQWKNLFQQYDRDHSGSISSTELQQALSQMGY 214
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 364 PPGTHPDVIRSFEMVDRDRSGFIDENELQQALSS-GYQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 PPG +P+ + F VD D+SG+I+ EL+QAL + F+ T +++ +F + S R+ F+ LW+ L QWRA F+++DRDRSG I+ E+ AL +GY Sbjct: 98 PPGVNPEAYQWFSTVDSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMF-DKTKSGRVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQALSQMGY 201
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PDCD6_MOUSE (Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 397 FEMVDRDRSGFIDENELQQALSSG-YQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 F+ VD+DRSG I +NELQQALS+G + F+ T+R ++ +F + + + EF +W + W+ +F YDRD SG ID EL+ AL GY Sbjct: 32 FQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMF-DRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY 124
BLAST of FC931889 vs. ExPASy Swiss-Prot
Match: PDCD6_HUMAN (Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 397 FEMVDRDRSGFIDENELQQALSSG-YQRFSLSTIRLLMFLFRNPHDSLRIGPKEFADLWSCLGQWRAIFERYDRDRSGKIDLMELRDALYSIGY 675 F+ VD+DRSG I + ELQQALS+G + F+ T+R ++ +F + + + EF +W + W+ +F YDRD SG ID EL+ AL GY Sbjct: 32 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMF-DRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY 124 The following BLAST results are available for this feature:
BLAST of FC931889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931889 ID=FC931889; Name=FC931889; organism=Citrus clementina; type=EST; length=678bpback to top |