FC931899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.605e-72 Identity = 137/168 (81.55%), Postives = 149/168 (88.69%), Query Frame = 2 Query: 119 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIK 622 M Q+WETLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F S + H + RS E + Q EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF ++DLTGDISGLG FELEALQDWEYKFMSKYVKVG+I+ Sbjct: 1 MVQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVH-RPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQ 167
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 3.892e-68 Identity = 128/171 (74.85%), Postives = 144/171 (84.21%), Query Frame = 2 Query: 119 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS---SDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIK 622 MAL+LW+TLKEAI AYTGLSP FFT +AL +AIY V+SG F S N HQ+ +E+ P+P PVQ+GEITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSF EKDLT D+SGLGPFEL+ALQDWEYKFMSKY KVG++K Sbjct: 1 MALELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVK 171
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.920e-23 Identity = 50/99 (50.51%), Postives = 69/99 (69.70%), Query Frame = 2 Query: 329 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS 625 E T E+L QY+G+D KP+ +AIK +++DV+ + FYG GG Y++FAGKDASRAL KMS E+D++ + GL E+ L DWE KF +KY VG + S Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 311 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGA 649 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS DLT DISGL ELEAL D + + +KY VG + DG+ Sbjct: 41 PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.825e-18 Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 311 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGA 649 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS DLT D +GL ELEAL D + + +KY VG + DG+ Sbjct: 41 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: PGRC1_RAT (Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 2 Query: 299 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 619 EP P P ++ + T EL++YDG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA + KD D+S L P + E L DW+ +F KY VG + Sbjct: 61 EPPPLPRLKPRDFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 170
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: PGRC1_PIG (Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17 Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 176 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 619 SP + ++ +Y ++ G Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA + KD D+S L P + E L DW+ +F KY VG + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 169
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: PGRC1_BOVIN (Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17 Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 176 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 619 SP + ++ +Y ++ G Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA + KD D+S L P + E L DW+ +F KY VG + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 169
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17 Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 311 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGA 649 PPV+L TEEEL +Y G + +P+ MA+K ++DV+ + FYG G PY GKD++R +AKMS DLT D +GL ELE+L D + + +KY VG + DG+ Sbjct: 39 PPVRL--FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVGYTARRILNEDGS 150
BLAST of FC931899 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4) HSP 1 Score: 87.4261 bits (215), Expect = 6.967e-17 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 2 Query: 299 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFGE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 619 EP P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA + KD D+S L P + E L DW+ +F KY VG + Sbjct: 61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 170 The following BLAST results are available for this feature:
BLAST of FC931899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931899 ID=FC931899; Name=FC931899; organism=Citrus clementina; type=EST; length=659bpback to top |