FC931911

Overview
NameFC931911
Unique NameFC931911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15410 contig Ccv1_Contig15410:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.317e-53
Identity = 91/151 (60.26%), Postives = 117/151 (77.48%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GI+  RL+EERK WR++HP+GF A+P T  DGS+NL +W C IPGKT T+WEGG +PL + F+EDYPSKPPKC+FP+ FFHPNVYPSGTVCLSILNE+  W+P++T+K +L+GIQDLLD PNP  PAQ     LF+ +  EY +   ++ K
Sbjct:    3 GISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.547e-52
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1
Query:  244 GIARGRLTEERKAWRKNHPHGFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKRGCDSRPK 693
            GIA  RL +ERKAWRK+HP GFVA P +  DG++NLM WEC IPGK GT WEGG F L + F +DYPS PPKCKF    FHPNVYPSGTVCLSIL ED  WRPAIT+KQIL+GIQ+LL++PN  DPAQ + Y ++ Q+  EY++   ++ K
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAK 153          
The following BLAST results are available for this feature:
BLAST of FC931911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
UBC9_DICDI5.317e-5360.26Sumo-conjugating enzyme ubc9 OS=Dictyostelium disc... [more]
UBC9_XENTR1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK1.547e-5262.25SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE1.547e-5262.25SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UBC9A_DANRE1.547e-5262.25SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]

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Properties
Property NameValue
Genbank descriptionC34202E05EF PostHarveN Citrus clementina cDNA clone C34202E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931911 ID=FC931911; Name=FC931911; organism=Citrus clementina; type=EST; length=707bp
GCCGGGGTTCGTCTTCGAGTCGGCGTCGTGAAATATAGAAGCATGGAAGT
TACGTAAGCTTCAATCTTCCGTTTAAGAATATCAGAAGTCAACATCCCGG
GCAGCAAGCACGTACACGGTACTCGGTACTCGGTACTCGGTACTCGGTAC
TCATAAGCTTGTTTCTTCTGCAAACAAACATTGATTAATACAGTTAGTTA
TACAAGCGATCATAATTCAAACGTAAGAGTCATCATGTCGGGTGGTATTG
CTCGCGGCCGTCTCACAGAGGAGCGAAAAGCCTGGCGCAAGAATCATCCC
CACGGTTTTGTGGCCAAGCCTGAAACCAAAGATGGTTCCGTGAATTTGAT
GATCTGGGAGTGTATCATTCCTGGCAAGACTGGGACTGATTGGGAAGGTG
GCTACTTTCCTCTTACTCTCTACTTCAGCGAAGACTATCCCAGCAAACCC
CCAAAGTGTAAGTTTCCTCAAGGTTTCTTTCATCCTAATGTCTACCCTTC
TGGAACAGTATGCCTGTCAATCCTCAATGAGGACAATGGGTGGAGACCTG
CCATTACTGTGAAGCAAATTTTAGTGGGCATTCAGGATTTGCTGGATCAA
CCCAATCCTGCTGATCCAGCACAAACTGATGGATACCAGCTTTTCATCCA
GGATCCTGCCGAGTACAAGAGAGGGTGCGACAGCAGGCCAAAGCATATCC
ACCTGNT
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