FC931940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 337.421 bits (864), Expect = 4.303e-92 Identity = 168/205 (81.95%), Postives = 187/205 (91.22%), Query Frame = 2 Query: 53 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 M GI+RQ+ A G S + R R + + R+Y++ K+M VR+ LNSA+DEEMSADPKVF+MGEEVG+YQGAYKI+KGLLEKYGPERV DTPITEAGFTGIGVGAAY GLKPVVEF+TFNFSMQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVL+PYS+EDARGLLKAAIRDPDPVVFLE Sbjct: 1 MLGILRQR-AIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLE 204
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.068e-86 Identity = 166/205 (80.98%), Postives = 176/205 (85.85%), Query Frame = 2 Query: 53 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 M G+IR K IRP S R +SSA KQM VR+ LNSALD EMSAD KVFLMGEEVGEYQGAYK++KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF+TFNFSMQAIDHIINSAAKSNYMS+GQISVPIVFRG NG AAGVGAQHS CYA+WY S PGLKVL P+S+EDARGLLKAAIRDPDPVVFLE Sbjct: 1 MLGVIRNKT----------IRPSFSAFRFFSSA-KQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLE 194
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.140e-68 Identity = 123/175 (70.29%), Postives = 150/175 (85.71%), Query Frame = 2 Query: 143 SSAVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 S+ VK+M VR+ LNSA++EEM D +VFL+GEEV +Y GAYKIS+GLL+K+GP+RV+DTPITE GFTG+ GAA+ GL+P+ EF+TFNFSMQAIDHI+NSAA++ YMS G + PIVFRGPNG AA V AQHSQ +A WY S+PGLKV+SPYS+EDARGLLKAAIRDP+PVV LE Sbjct: 32 SNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLE 206
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 2.540e-68 Identity = 125/191 (65.45%), Postives = 153/191 (80.10%), Query Frame = 2 Query: 95 SPVARIRPVVSNLRNYSSAVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 +P + +RP + S+ K M VRE LNSA+ EE+ D VFL+GEEV +Y GAYK+SKGLL+++G RV+DTPITE GFTG+ VGAA GLKP+VEF++FNFSMQAIDH++NSAAK++YMS G +VFRGPNGAA GVGAQHSQ ++ WY S+PGLKVL PYS+EDARGLLKAAIRDP+PVVFLE Sbjct: 17 APTSFVRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLE 207
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.791e-67 Identity = 117/173 (67.63%), Postives = 149/173 (86.13%), Query Frame = 2 Query: 149 AVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 A K++ VR+ +NSALDEE++ D KVF+MGEEV +Y GAYKI+KGL +KYG +R++DTPITEAGF GIGVGAA G +P++EF+TFNF+MQAIDHIINS+AK++YMS G++ PIV+RGPNG VGAQHSQC+AAWY SVPGLKV++P+S+ D RGLLK+AIRD +PVV+LE Sbjct: 25 ATKEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLE 197
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 8.172e-67 Identity = 123/173 (71.10%), Postives = 146/173 (84.39%), Query Frame = 2 Query: 149 AVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 A M VR+ LN A+DEE+ D +VFLMGEEV +Y GAYKISKGL +K+G +RV+DTPITE GF GI VGAA+ GL+P+ EF+TFNFSMQAID IINSAAK+ YMS+G++ VPIVFRGPNGAAAGV AQHSQ ++AWYA PGLKV+ PYS+EDA+GLLKAAIRD +PVVFLE Sbjct: 21 AASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLE 193
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 249.595 bits (636), Expect = 1.180e-65 Identity = 118/169 (69.82%), Postives = 144/169 (85.21%), Query Frame = 2 Query: 161 MMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 M VRE L A+ EEM A+ VF+MGEEV EYQGAYK+++GLL+++G RV+DTPITE GF G+GVGAA GL+P+VEF+TFNF+MQAID IINSAAK+ YMS GQ+ PIVFRGP+GAAA V AQHSQCYAAWY+ +PGLKV+ PY++ DA+GLLKAAIRDP+PV+FLE Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLE 306
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 7.649e-65 Identity = 117/173 (67.63%), Postives = 143/173 (82.66%), Query Frame = 2 Query: 149 AVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 A Q+ VRE +N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EF+TFNFSMQAID +INSAAK+ YMS G SVPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP+SSEDA+GL+K+AIRD +PVV LE Sbjct: 29 AALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLE 201
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 2.225e-64 Identity = 115/173 (66.47%), Postives = 143/173 (82.66%), Query Frame = 2 Query: 149 AVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 A Q+ VRE +N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EF+TFNFSMQAID +INSAAK+ YMS+G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LE Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLE 201
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.906e-64 Identity = 115/173 (66.47%), Postives = 143/173 (82.66%), Query Frame = 2 Query: 149 AVKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 A Q+ VRE +N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EF+TFNFSMQAID +INSAAK+ YMS+G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LE Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLE 201 The following BLAST results are available for this feature:
BLAST of FC931940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931940 ID=FC931940; Name=FC931940; organism=Citrus clementina; type=EST; length=694bpback to top |