FC931951

Overview
NameFC931951
Unique NameFC931951
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10777 contig Ccv1_Contig10777:386..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRC_PEA (Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 5.145e-109
Identity = 192/224 (85.71%), Postives = 213/224 (95.09%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKKILVYGAS+GGEL+DAR++GWE++E +DF+WKKLLQKKTDEI RLNGIYKRLLSNAGVKL+EGEGKI  PNEVEVTQLDGTKLSYSAKHILIATGSRAQR  IPGQEL ITSDEALSLEE PKRAV+LGGGYIAVEFASIWRGMGS+V+L+FRKELPLRGFDDEMRAVVARNLEGRGINLHPRT + +LIK+E+ IKVITDHGEE++ADVVLFATGR+PN+K
Sbjct:   79 PKKILVYGASYGGELQDARNFGWELNENVDFNWKKLLQKKTDEINRLNGIYKRLLSNAGVKLFEGEGKIASPNEVEVTQLDGTKLSYSAKHILIATGSRAQRPNIPGQELGITSDEALSLEEFPKRAVILGGGYIAVEFASIWRGMGSSVNLVFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTNLAQLIKTEDGIKVITDHGEELIADVVLFATGRSPNSK 302          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRP_SPIOL (Glutathione reductase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.655e-107
Identity = 190/224 (84.82%), Postives = 209/224 (93.30%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKKILVYGASFGGELEDA++YGWE++EKIDF+WKKLLQKKTDEI+RLN IYKRLLSNAGVKLYEGEGKIVGPNEV+VTQLDGTKLSYSAKHILIATGSRAQR  IPGQELAITSDEALSLEE PKR V+LGGGYI+VEFASIWRGMG+ V+L FRKELPLRGFDDEMRA VARNLEGRG+N+HPRTT+ EL+K++  +   TDHGEEI ADVVLFATGR+PNTK
Sbjct:   70 PKKILVYGASFGGELEDAKNYGWELNEKIDFNWKKLLQKKTDEIIRLNNIYKRLLSNAGVKLYEGEGKIVGPNEVQVTQLDGTKLSYSAKHILIATGSRAQRPNIPGQELAITSDEALSLEEFPKRVVILGGGYISVEFASIWRGMGADVNLCFRKELPLRGFDDEMRAAVARNLEGRGVNVHPRTTLTELVKTDGGVVARTDHGEEIEADVVLFATGRSPNTK 293          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRC_BRARP (Glutathione reductase, cytosolic OS=Brassica rapa subsp. pekinensis GN=GR1 PE=2 SV=2)

HSP 1 Score: 384.03 bits (985), Expect = 4.077e-106
Identity = 186/224 (83.04%), Postives = 209/224 (93.30%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKKILVYGA++GGELEDAR+YGWE++  +DF+WKKLLQKKTDEILRLN IYKRLL+NA VKLYEGEG+IVGPNEVEV Q+DGTK+SY+AKHILIATGSRAQ+  IPG ELAITSDEALSLEE PKRA+VLGGGYIAVEFASIWRGMG+TVDL FRKELPLRGFDDEMRA+VARNLEGRGINLHP+T++ ELIK+++ IKVI+ HGEE VADVVLFATGR PNTK
Sbjct:   83 PKKILVYGATYGGELEDARNYGWEINGNVDFNWKKLLQKKTDEILRLNNIYKRLLANAAVKLYEGEGRIVGPNEVEVRQIDGTKISYTAKHILIATGSRAQKPNIPGHELAITSDEALSLEEFPKRAIVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRALVARNLEGRGINLHPQTSLAELIKTDDGIKVISSHGEEFVADVVLFATGRIPNTK 306          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRC_ARATH (Glutathione reductase, cytosolic OS=Arabidopsis thaliana GN=At3g24170 PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 5.325e-106
Identity = 183/224 (81.70%), Postives = 210/224 (93.75%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKKILVYGA++GGELEDA++YGWE++EK+DF WKKLLQKKTDEILRLN IYKRLL+NA VKLYEGEG++VGPNEVEV Q+DGTK+SY+AKHILIATGSRAQ+  IPG ELAITSDEALSLEE PKRA+VLGGGYIAVEFASIWRGMG+TVDL FRKELPLRGFDDEMRA+VARNLEGRG+NLHP+T++ +L K+++ IKVI+ HGEE VADVVLFATGR+PNTK
Sbjct:   80 PKKILVYGATYGGELEDAKNYGWEINEKVDFTWKKLLQKKTDEILRLNNIYKRLLANAAVKLYEGEGRVVGPNEVEVRQIDGTKISYTAKHILIATGSRAQKPNIPGHELAITSDEALSLEEFPKRAIVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRALVARNLEGRGVNLHPQTSLTQLTKTDQGIKVISSHGEEFVADVVLFATGRSPNTK 303          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRC_ORYSJ (Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica GN=GRC2 PE=2 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 9.124e-90
Identity = 159/224 (70.98%), Postives = 192/224 (85.71%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKKILVYG+SF GE EDA+++GWE++  I+F+WK+LL+ KT EI+RLNG+Y+R+L N+GV + EG G +V  + VEVT+ DG+K  Y+AKHILIATGSRAQR  IPG+ELAITSDEALSLEELPKRAV+LGGGYIAVEFASIW+GMG+ VDL +RKELPLRGFDDEMR VVA NLEGRGI LHP T + EL K+ + IKV+TD GEEI+ADVVLFATGR PN++
Sbjct:   77 PKKILVYGSSFRGEFEDAKNFGWEINGDINFNWKRLLENKTQEIVRLNGVYQRILGNSGVTMIEGAGSLVDAHTVEVTKPDGSKQRYTAKHILIATGSRAQRVNIPGKELAITSDEALSLEELPKRAVILGGGYIAVEFASIWKGMGAHVDLFYRKELPLRGFDDEMRTVVASNLEGRGIRLHPGTNLSELSKTADGIKVVTDKGEEIIADVVLFATGRTPNSQ 300          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHR_PSEAE (Glutathione reductase OS=Pseudomonas aeruginosa GN=gor PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 107/222 (48.20%), Postives = 143/222 (64.41%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIK-SEESIKVITDHGEEIVADVVLFATGRAP 673
            PKK+LVYGA F  + E AR+YGW   E   FDW  L+  K  EI RLNGIY+ LL N+GV L EG  +++  + VEV   DG +  +SAKHIL+ATG   Q   IPG+E AITS+EA  LE LP+R +V+GGGYIAVEFASI+ G+G+   LL+R++L LRGFD  +R  +   L  +G++L   + I  + K ++ S+      G  + AD V +ATGR P
Sbjct:   49 PKKLLVYGAHFSEDFEQARAYGWSAGEA-QFDWATLIGNKNREIQRLNGIYRNLLVNSGVTLLEGHARLLDAHSVEV---DGQR--FSAKHILVATGGWPQVPDIPGKEHAITSNEAFFLERLPRRVLVVGGGYIAVEFASIFNGLGAETTLLYRRDLFLRGFDRSVREHLRDELGKKGLDLQFNSDIARIDKQADGSLAATLKDGRVLEADCVFYATGRRP 264          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRP_PEA (Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum GN=GR PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.314e-47
Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE-SIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKK+LVY + F  E E++  +GW    +   DW  L+  K  E+ RL GIYK  L NAGVKL EG GKIV  + V+V   DG KL YSAKHIL++ G R     IPG+E AI SD AL L   P++  ++GGGYIA+EFA I+ G+ S V +  R++  LRGFD+E+R  VA N+  RGI  H   +   + K+ + S+ + T+ G E     ++FATGR+PNTK
Sbjct:  128 PKKLLVYASKFSHEFEESNGFGWRYDSEPKHDWSSLIANKNAELQRLTGIYKNTLKNAGVKLIEGRGKIVDAHTVDV---DG-KL-YSAKHILVSVGGRPFIPDIPGKEYAIDSDAALDLPSKPQKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVAENMALRGIEFHTEESPVAITKAADGSLSLKTNKGTEEGFSHIMFATGRSPNTK 347          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRP_SOYBN (Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.353e-45
Identity = 99/225 (44.00%), Postives = 136/225 (60.44%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE-SIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKK+LVY + F  E E++  +GW    +   DW   +  K  E+ RL GIYK +L+NAGVKL EG GK++ P+ V+V      KL YSAKHIL+A G R     IPG+ELAI SD AL L   P +  ++GGGYIA+EFA I+ G+ S V +  R++  LRGFD+E+R  V   +  RGI  H   + + + KS + S  + T+ G       ++FATGR PNT+
Sbjct:  120 PKKLLVYASKFSHEFEESNGFGWRYDSEPKHDWSSFIANKNAELQRLTGIYKNILNNAGVKLIEGHGKMIDPHTVDVNG----KL-YSAKHILVAVGGRPFIPDIPGKELAIDSDAALDLPTKPVKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVEEQMSVRGIEFHTEESPQAITKSADGSFSLKTNKGTVDGFSHIMFATGRRPNTQ 339          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.242e-45
Identity = 101/225 (44.89%), Postives = 137/225 (60.89%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE-SIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKK+LVY + +  E E++  +GW    +  FDW  L+  K  E+ RL GIYK +L NAGV L EG GK+V P+ V+V   DG KL YSAK+ILI+ G R     IPG E AI SD AL L   P +  ++GGGYIA+EFA I+ G+ S V +  R++  LRGFD+E+R  V   +  RGI  H   + + ++KS + S+ + T  G       ++FATGR PNTK
Sbjct:  134 PKKLLVYASKYSHEFEESCGFGWNYDVEPRFDWSTLIANKNAELQRLTGIYKNILKNAGVTLIEGRGKVVDPHTVDV---DG-KL-YSAKNILISVGGRPFIPDIPGSEYAIDSDAALDLPTKPNKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVGEQMSLRGIEFHTEESPQAIVKSADGSLSLKTSRGTVEGFSHIMFATGRRPNTK 353          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.569e-44
Identity = 96/225 (42.67%), Postives = 134/225 (59.56%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKS-EESIKVITDHGEEIVADVVLFATGRAPNTK 682
            PKK+LVY + +  E ED+  +GW+   +   DW  L+  K  E+ RL GIYK +LS A VKL EG GK++ P+ V+V   DG    Y+ ++ILIA G R     IPG+E AI SD AL L   PK+  ++GGGYIA+EFA I+ G+   V +  R++  LRGFD+++R  V   +  RGI  H   + + +IK+ + S  + T  G       V+FATGR PNTK
Sbjct:  142 PKKLLVYASKYSHEFEDSHGFGWKYETEPSHDWTTLIANKNAELQRLTGIYKNILSKANVKLIEGRGKVIDPHTVDV---DGK--IYTTRNILIAVGGRPFIPDIPGKEFAIDSDAALDLPSKPKKIAIVGGGYIALEFAGIFNGLNCEVHVFIRQKKVLRGFDEDVRDFVGEQMSLRGIEFHTEESPEAIIKAGDGSFSLKTSKGTVEGFSHVMFATGRKPNTK 361          
The following BLAST results are available for this feature:
BLAST of FC931951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
GSHRC_PEA5.145e-10985.71Glutathione reductase, cytosolic OS=Pisum sativum ... [more]
GSHRP_SPIOL1.655e-10784.82Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRC_BRARP4.077e-10683.04Glutathione reductase, cytosolic OS=Brassica rapa ... [more]
GSHRC_ARATH5.325e-10681.70Glutathione reductase, cytosolic OS=Arabidopsis th... [more]
GSHRC_ORYSJ9.124e-9070.98Glutathione reductase, cytosolic OS=Oryza sativa s... [more]
GSHR_PSEAE6.615e-4848.20Glutathione reductase OS=Pseudomonas aeruginosa GN... [more]
GSHRP_PEA7.314e-4746.22Glutathione reductase, chloroplastic/mitochondrial... [more]
GSHRP_SOYBN2.353e-4544.00Glutathione reductase, chloroplastic OS=Glycine ma... [more]
GSHRP_TOBAC5.242e-4544.89Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRP_ARATH7.569e-4442.67Glutathione reductase, chloroplastic OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC34202H10EF PostHarveN Citrus clementina cDNA clone C34202H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931951 ID=FC931951; Name=FC931951; organism=Citrus clementina; type=EST; length=701bp
GTGGTTGTGTCCCAAAAAGATATTGGTCTATGGAGCATCATTTGGAGGTG
AACTTGAGGATGCAAGGAGTTATGGATGGGAGGTACATGAGAAAATTGAC
TTCGACTGGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACT
AAATGGAATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATG
AAGGGGAGGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTA
GATGGCACTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGG
AAGTAGGGCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCT
CTGACGAGGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTT
GGTGGAGGGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGG
TTCTACTGTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTG
ATGATGAAATGCGGGCAGTAGTTGCCAGAAATCTGGAAGGGAGGGGAATT
AATTTGCACCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAG
TATAAAAGTTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTAC
TCTTTGCCACTGGCAGGGCACCTAATACAAAAGGTTGAATTTGAAGCTGT
T
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